Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_F18
         (240 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    22   1.1  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   2.5  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   2.5  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        19   9.9  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    19   9.9  

>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 1.1
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -3

Query: 133 LENITYTQLK*IKTIEMLTNFKVSLKP 53
           +ENIT  QL+ +K +EM+      L P
Sbjct: 33  IENITMQQLQEMKYLEMVLKEAQRLYP 59


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 2.5
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -3

Query: 235 LLKGSKSFSCECWYIIIIIHDLSHSKTYVDYKMTLENIT 119
           ++K   SF    +  ++++  LS   T+     TLEN+T
Sbjct: 68  IMKFVLSFRTGSFTFLMVVAVLSSGTTFKLVAKTLENMT 106


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 20.6 bits (41), Expect = 2.5
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -3

Query: 235 LLKGSKSFSCECWYIIIIIHDLSHSKTYVDYKMTLENIT 119
           ++K   SF    +  ++++  LS   T+     TLEN+T
Sbjct: 68  IMKFVLSFRTGSFTFLMVVAVLSSGTTFKLVAKTLENMT 106


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 18.6 bits (36), Expect = 9.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 187 IIIHDLSHSKTYVD 146
           ++I  LSH  +YVD
Sbjct: 241 LMIVKLSHCNSYVD 254


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory
          receptor candidate 35 protein.
          Length = 251

 Score = 18.6 bits (36), Expect = 9.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 56 TYEILFIIFLDFMIYY 9
          T  + FIIF+   IY+
Sbjct: 9  TISMAFIIFVSLEIYH 24


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,620
Number of Sequences: 336
Number of extensions: 644
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 46
effective length of database: 107,129
effective search space used:  3535257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)