Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_F18
         (240 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   2.1  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   2.1  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   2.8  

>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.0 bits (42), Expect = 2.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 172 LSHSKTYVDYKMTLENITYTQ 110
           L   K  +DY + LEN  +T+
Sbjct: 281 LHKMKNIIDYYLVLENTDHTK 301


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.0 bits (42), Expect = 2.1
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 172 LSHSKTYVDYKMTLENITYTQ 110
           +SH+     YK+ L+N+ YT+
Sbjct: 667 VSHANQRNMYKLDLKNMKYTR 687


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 20.6 bits (41), Expect = 2.8
 Identities = 7/28 (25%), Positives = 16/28 (57%)
 Frame = -3

Query: 193 IIIIIHDLSHSKTYVDYKMTLENITYTQ 110
           I ++  ++     +V +K+T +N  +TQ
Sbjct: 162 IELVREEILFDTVHVTFKLTFDNRAFTQ 189


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,016
Number of Sequences: 438
Number of extensions: 713
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4024224
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)