Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_F17
(298 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical pr... 132 3e-32
Z46791-1|CAA86761.1| 476|Caenorhabditis elegans Hypothetical pr... 31 0.20
Z81055-1|CAB02889.1| 618|Caenorhabditis elegans Hypothetical pr... 28 1.0
Z66515-10|CAI70410.1| 510|Caenorhabditis elegans Hypothetical p... 28 1.4
Z66515-9|CAA91346.1| 519|Caenorhabditis elegans Hypothetical pr... 28 1.4
M77697-7|AAA27902.6| 903|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 27 2.4
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 27 2.4
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 27 2.4
AL110490-5|CAB54441.1| 424|Caenorhabditis elegans Hypothetical ... 27 3.2
AC006777-5|AAK72311.1| 247|Caenorhabditis elegans Hypothetical ... 27 3.2
Z81513-10|CAB04183.1| 247|Caenorhabditis elegans Hypothetical p... 26 4.2
Z34533-5|CAA84298.1| 781|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z81513-11|CAB04184.2| 254|Caenorhabditis elegans Hypothetical p... 26 5.6
Z77660-6|CAB01177.1| 197|Caenorhabditis elegans Hypothetical pr... 26 5.6
Z73975-1|CAA98276.1| 282|Caenorhabditis elegans Hypothetical pr... 26 5.6
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 25 7.4
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 25 7.4
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 25 7.4
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 25 7.4
Z92832-1|CAB07370.1| 450|Caenorhabditis elegans Hypothetical pr... 25 9.7
>Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical
protein F10B5.1 protein.
Length = 214
Score = 132 bits (320), Expect = 3e-32
Identities = 62/92 (67%), Positives = 71/92 (77%)
Frame = +1
Query: 22 GRDQFHIRMRLHRFHVIRVNKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRS 201
G+D FH+R+R H FHV R+NKMLSCAGADRLQTGMRGA+GKPQG VARV IG + S+R
Sbjct: 81 GKDGFHLRVRKHPFHVTRINKMLSCAGADRLQTGMRGAYGKPQGLVARVDIGDILFSMRI 140
Query: 202 SDRWKAQVIEALRRAKFKFPGRQKIYVSKKWG 297
+ IEA RRAKFKFPGRQ I S+KWG
Sbjct: 141 KEGNVKHAIEAFRRAKFKFPGRQIIVSSRKWG 172
>Z46791-1|CAA86761.1| 476|Caenorhabditis elegans Hypothetical
protein C09G5.2 protein.
Length = 476
Score = 30.7 bits (66), Expect = 0.20
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -3
Query: 146 GFPNAPRIPVWSLSAPA 96
GFPN+P +P+W LS P+
Sbjct: 232 GFPNSPLLPIWLLSYPS 248
>Z81055-1|CAB02889.1| 618|Caenorhabditis elegans Hypothetical
protein F01G10.1 protein.
Length = 618
Score = 28.3 bits (60), Expect = 1.0
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +1
Query: 127 RGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIE--ALRRAKFKFPGRQK 273
R GKP +A+ G+ I + + D W + + + K +F G QK
Sbjct: 228 RSTKGKPTAIIAKTLKGKGIEGIENEDNWHGKPVPEGTVNAIKARFHGSQK 278
>Z66515-10|CAI70410.1| 510|Caenorhabditis elegans Hypothetical
protein R53.1b protein.
Length = 510
Score = 27.9 bits (59), Expect = 1.4
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -2
Query: 159 YCALGFPERTT-HPSLEPISSSARQHFIDA 73
Y +LG + T HP+L +SS R+H++ A
Sbjct: 465 YTSLGGRDNTVKHPALRIVSSDGREHYLPA 494
>Z66515-9|CAA91346.1| 519|Caenorhabditis elegans Hypothetical
protein R53.1a protein.
Length = 519
Score = 27.9 bits (59), Expect = 1.4
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -2
Query: 159 YCALGFPERTT-HPSLEPISSSARQHFIDA 73
Y +LG + T HP+L +SS R+H++ A
Sbjct: 474 YTSLGGRDNTVKHPALRIVSSDGREHYLPA 503
>M77697-7|AAA27902.6| 903|Caenorhabditis elegans Hypothetical
protein B0303.11 protein.
Length = 903
Score = 27.5 bits (58), Expect = 1.8
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -2
Query: 288 LRYIDLLATRELELSTTQSLNDLCLPTVT*AYRHNGLSNTHTRYCALGFPERTTHPSLEP 109
+R + LL+T ++ +S S + LC+PT L N + L PE + P+L
Sbjct: 344 IRCLLLLSTVQILVSAIGSYDILCIPTTVFYLFAYALFNFYVFLVKLSDPEIPSPPTLLS 403
Query: 108 ISSSA 94
++ SA
Sbjct: 404 LAISA 408
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 162 RYCALGFPERTTHPS-LEPISSSARQHFIDADDME 61
R C GFP RT HP ++ + A + +DDM+
Sbjct: 708 RICRKGFPNRTQHPDFVQRYAILAAKEAKSSDDMK 742
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 162 RYCALGFPERTTHPS-LEPISSSARQHFIDADDME 61
R C GFP RT HP ++ + A + +DDM+
Sbjct: 708 RICRKGFPNRTQHPDFVQRYAILAAKEAKSSDDMK 742
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 162 RYCALGFPERTTHPS-LEPISSSARQHFIDADDME 61
R C GFP RT HP ++ + A + +DDM+
Sbjct: 708 RICRKGFPNRTQHPDFVQRYAILAAKEAKSSDDMK 742
>AL110490-5|CAB54441.1| 424|Caenorhabditis elegans Hypothetical
protein Y48B6A.5 protein.
Length = 424
Score = 26.6 bits (56), Expect = 3.2
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -2
Query: 180 LSNTHTRYCALGFPERTTHPSLEPISSSARQHFIDADDMEAV*SHPDVELISTLV 16
L++ +TRY + GF ++T EP S + HF D + V + +ST V
Sbjct: 187 LTSVYTRYDSQGFYQQTESSGFEPRSPTI-THFSDVESEYMVDMEQEPLDVSTAV 240
>AC006777-5|AAK72311.1| 247|Caenorhabditis elegans Hypothetical
protein Y46H3D.8 protein.
Length = 247
Score = 26.6 bits (56), Expect = 3.2
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 132 CVRETPRHSSACAYWTAHYVCT 197
C T SSACA W A+ CT
Sbjct: 206 CTSYTADSSSACASWAANGFCT 227
>Z81513-10|CAB04183.1| 247|Caenorhabditis elegans Hypothetical
protein F26D2.13 protein.
Length = 247
Score = 26.2 bits (55), Expect = 4.2
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 132 CVRETPRHSSACAYWTAHYVCT 197
C P SS+CA W A+ CT
Sbjct: 206 CTSYIPDSSSSCASWAANGFCT 227
>Z34533-5|CAA84298.1| 781|Caenorhabditis elegans Hypothetical
protein B0285.7 protein.
Length = 781
Score = 26.2 bits (55), Expect = 4.2
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +3
Query: 126 AWCVRETPRHSSACAYWTAHYVCT 197
A CV R C+YW VCT
Sbjct: 746 ACCVEHAIREMRKCSYWDIQDVCT 769
>Z81513-11|CAB04184.2| 254|Caenorhabditis elegans Hypothetical
protein F26D2.14 protein.
Length = 254
Score = 25.8 bits (54), Expect = 5.6
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 132 CVRETPRHSSACAYWTAHYVCT 197
C P SS+CA W A+ CT
Sbjct: 213 CSSYNPDSSSSCAAWAANGFCT 234
>Z77660-6|CAB01177.1| 197|Caenorhabditis elegans Hypothetical
protein F38H4.6 protein.
Length = 197
Score = 25.8 bits (54), Expect = 5.6
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +1
Query: 19 EGRDQFHIRMRLHRFHVIRVNKMLSCAGADRLQTGMRGAFGKPQGTVARV 168
E R + ++LH + V+ + C AD + F KP TV+ V
Sbjct: 95 EDRKPISVNLKLHNPMAVTVSYKVRCTSADIFRVQPPLGFVKPNETVSIV 144
>Z73975-1|CAA98276.1| 282|Caenorhabditis elegans Hypothetical
protein T06E8.1 protein.
Length = 282
Score = 25.8 bits (54), Expect = 5.6
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = -2
Query: 291 LLRYIDLLATRELELSTTQSLNDLCLPTVT*AYR 190
++R +D + T+ L L L+D+C + AY+
Sbjct: 225 VIRVLDAIPTKGLTLDDVSELSDMCRDVMLAAYK 258
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 25.4 bits (53), Expect = 7.4
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 162 RYCALGFPERTTHP 121
R C GFP RT HP
Sbjct: 710 RICRKGFPNRTLHP 723
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 25.4 bits (53), Expect = 7.4
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 162 RYCALGFPERTTHP 121
R C GFP RT HP
Sbjct: 710 RICRKGFPNRTLHP 723
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical
protein T18D3.4 protein.
Length = 1947
Score = 25.4 bits (53), Expect = 7.4
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 162 RYCALGFPERTTHP 121
R C GFP RT HP
Sbjct: 716 RICRKGFPNRTLHP 729
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical
protein T18D3.4 protein.
Length = 1947
Score = 25.4 bits (53), Expect = 7.4
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 162 RYCALGFPERTTHP 121
R C GFP RT HP
Sbjct: 716 RICRKGFPNRTLHP 729
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain
2 protein.
Length = 1947
Score = 25.4 bits (53), Expect = 7.4
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 162 RYCALGFPERTTHP 121
R C GFP RT HP
Sbjct: 716 RICRKGFPNRTLHP 729
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 25.4 bits (53), Expect = 7.4
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 162 RYCALGFPERTTHP 121
R C GFP RT HP
Sbjct: 713 RICRKGFPNRTLHP 726
>Z92832-1|CAB07370.1| 450|Caenorhabditis elegans Hypothetical
protein F31D4.2 protein.
Length = 450
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 14 GTRVEISSTSG*DYTASMSSAS 79
G R ++S T G D+T +MSS S
Sbjct: 195 GNRADMSLTGGDDHTLAMSSMS 216
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,152,054
Number of Sequences: 27780
Number of extensions: 145974
Number of successful extensions: 405
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 405
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 302276744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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