Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_F16
(243 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC14C8.03 |fma2||methionine aminopeptidase Fma2 |Schizosacchar... 28 0.20
SPAC926.04c |hsp90|swo1|heat shock protein Hsp90|Schizosaccharom... 27 0.35
SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr 1||... 26 0.80
SPBC16G5.15c |fkh2||fork head transcription factor Fkh2 |Schizos... 25 1.9
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 25 1.9
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 25 1.9
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 25 1.9
SPAC1399.03 |fur4||uracil permease|Schizosaccharomyces pombe|chr... 24 2.4
SPCC594.02c |||conserved fungal protein|Schizosaccharomyces pomb... 24 2.4
SPCC13B11.03c |||hydroxyacylglutathione hydrolase |Schizosacchar... 24 2.4
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 24 2.4
SPCC18.07 |rpc53||DNA-directed RNA polymerase III complex subuni... 23 4.3
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 23 4.3
SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1... 23 4.3
SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr ... 23 4.3
SPCC794.08 |||HEAT repeat protein, unknown biological role|Schiz... 23 5.6
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 23 7.5
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 23 7.5
SPAC23G3.05c |||regulator of G-protein signaling |Schizosaccharo... 23 7.5
SPCC306.04c |set1||histone lysine methyltransferase Set1|Schizos... 23 7.5
SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyce... 23 7.5
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 22 9.9
SPAC18G6.09c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 22 9.9
SPAC15A10.09c |||SUR7 family protein|Schizosaccharomyces pombe|c... 22 9.9
SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch... 22 9.9
SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces p... 22 9.9
SPBC16A3.08c |||nuclear telomere cap complex subunit |Schizosacc... 22 9.9
>SPBC14C8.03 |fma2||methionine aminopeptidase Fma2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 27.9 bits (59), Expect = 0.20
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 87 IIMADAAVEKQDAAPEEVTSTEVKDSPIKKSPTKKTEVPE 206
++ D VE+ DAA E ++ E K KKS +KK + P+
Sbjct: 25 VVEDDGKVEENDAAEEGASNGEKKKKKKKKS-SKKKKTPQ 63
>SPAC926.04c |hsp90|swo1|heat shock protein
Hsp90|Schizosaccharomyces pombe|chr 1|||Manual
Length = 704
Score = 27.1 bits (57), Expect = 0.35
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +3
Query: 84 IIIMADAAVEKQDAAPEEVTSTEVKDSPIKKSPTKKTEVPESNGKENGTEEV 239
I ++ VEK+ PEE + EVK+ K+P + ES KE T++V
Sbjct: 206 IQLVVTREVEKE--VPEEEETEEVKNEEDDKAPKIEEVDDESEKKEKKTKKV 255
>SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 992
Score = 25.8 bits (54), Expect = 0.80
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +3
Query: 81 SIIIMADAAVEKQDAAPEEVTSTEVKDSPIKKSPTKKTEVPESNGKE 221
SI + + EK E V S + K+SP E+P ++G +
Sbjct: 572 SISLSEETKQEKPSKLKETVESKRLSTGVQKQSPAASKEIPVTSGSQ 618
>SPBC16G5.15c |fkh2||fork head transcription factor Fkh2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 24.6 bits (51), Expect = 1.9
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +3
Query: 78 NSIIIMADAAVEKQDAAPEEVTSTEVKD--SPIKKSPTKKTEVPESN 212
NS + AV++ P+ + + K+ S + SPT+K++ E+N
Sbjct: 529 NSNSKSSPVAVQRVSTLPQASANKQAKEMESKMSNSPTQKSKTEENN 575
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 24.6 bits (51), Expect = 1.9
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +3
Query: 120 DAAPEEVTSTEVKDSPIKKSPTKKTEVPESNGKENGTEE 236
D PE+ + + P+KK P+KK++ ++N E +E
Sbjct: 58 DLKPED-DEVDEEVVPVKKKPSKKSKKAKANAFEAFADE 95
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 24.6 bits (51), Expect = 1.9
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 241 ATSSVPFSLPLLSGTSVFLVGDFLIGESLTSVEVTSSGAASCFSTAAS 98
A+SS+ S L S ++ SLTS TSS AS +T++S
Sbjct: 81 ASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSS 128
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 24.6 bits (51), Expect = 1.9
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 111 EKQDAAPEEVTSTEVKDSPIKKSPTKKTE 197
EK DA+ T+T + DS K+PTKK++
Sbjct: 1104 EKADAS----TTTVLSDSRFMKAPTKKSQ 1128
>SPAC1399.03 |fur4||uracil permease|Schizosaccharomyces pombe|chr
1|||Manual
Length = 581
Score = 24.2 bits (50), Expect = 2.4
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = -2
Query: 239 YFFCAVLFTIALRYFSFFGGRFLNWRILDFRGSHLFGCGVLL 114
YF L +A Y S + W+ ++FR + CG+L+
Sbjct: 430 YFVRKGLIRVAPLYSSSSSSPYYFWKGINFRAFASYICGMLI 471
>SPCC594.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 489
Score = 24.2 bits (50), Expect = 2.4
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 102 AAVEKQ-DAAPEEVTSTEVKDSPIKKSPTKKTEVPES 209
A +EK + APE V T SP++ + K T+V +S
Sbjct: 309 APLEKPVNLAPEVVEPTNAAASPLQLNAPKLTDVDDS 345
>SPCC13B11.03c |||hydroxyacylglutathione hydrolase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 256
Score = 24.2 bits (50), Expect = 2.4
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -1
Query: 72 KKIRNKEVKLQHVLRT 25
KK++NKE+ LQ +L T
Sbjct: 47 KKLKNKEIDLQAILTT 62
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 24.2 bits (50), Expect = 2.4
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 171 KKSPTKKTEVPESNGK 218
KK+ K+ EVP SNGK
Sbjct: 73 KKTEFKQDEVPNSNGK 88
>SPCC18.07 |rpc53||DNA-directed RNA polymerase III complex subunit
Rpc53|Schizosaccharomyces pombe|chr 3|||Manual
Length = 330
Score = 23.4 bits (48), Expect = 4.3
Identities = 10/29 (34%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +3
Query: 144 STEVKDSPI-KKSPTKKTEVPESNGKENG 227
S+EVK+ +K+ ++ + P+ +G+ENG
Sbjct: 222 SSEVKEEEAGEKTDVEEKKDPDKHGRENG 250
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 23.4 bits (48), Expect = 4.3
Identities = 8/28 (28%), Positives = 18/28 (64%)
Frame = +3
Query: 156 KDSPIKKSPTKKTEVPESNGKENGTEEV 239
KDSP+ +SP K+++ + + ++ E +
Sbjct: 92 KDSPVNQSPWKRSDSSKRSSSQDEFESL 119
>SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1023
Score = 23.4 bits (48), Expect = 4.3
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +3
Query: 150 EVKDSPIKKSPTKK 191
E ++SP+K PTKK
Sbjct: 892 ETRESPMKNKPTKK 905
>SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 791
Score = 23.4 bits (48), Expect = 4.3
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 108 VEKQDAAPEEVTSTEVKDSPIKKSPTKKTEVPESNGKENGTE 233
VEK D + E K S + P+ T+ E+ G + GT+
Sbjct: 384 VEKVDGNTSSPSKEEEKPSTEPEKPSVVTQRKETTGTKLGTK 425
>SPCC794.08 |||HEAT repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 798
Score = 23.0 bits (47), Expect = 5.6
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -2
Query: 239 YFFCAVLFT-IALRYFSFFGGRFLNWRILDFRGSHLFGC 126
+FF A T + L Y S + L+W ++ R S F C
Sbjct: 277 HFFAAKSDTPVNLEYISVVLNQILDWTPVELRHSIFFCC 315
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 22.6 bits (46), Expect = 7.5
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3
Query: 144 STEVKDSPIKKSPTKKTEVPE 206
STEV D +KK P + PE
Sbjct: 555 STEVHDGRLKKYPYYHVKTPE 575
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 22.6 bits (46), Expect = 7.5
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = -3
Query: 226 PFSLPLLSGTSVFLVGDFLIGESLTSVEVTSSGAASCFSTAASA 95
PF S + V + F +S T+V + + CF+ A +A
Sbjct: 4558 PFDKQFSSESGVQMFSHFTFEQSNTNVLALADASMKCFNYANTA 4601
>SPAC23G3.05c |||regulator of G-protein signaling
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 343
Score = 22.6 bits (46), Expect = 7.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 145 PRKSRILQLRNLPPKKL 195
PR S +L +NLPP L
Sbjct: 5 PRVSEVLTKKNLPPLSL 21
>SPCC306.04c |set1||histone lysine methyltransferase
Set1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 920
Score = 22.6 bits (46), Expect = 7.5
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 141 TSTEVKDSPIKKSPTKKTEVPESNGKEN 224
TST K P++++ K PE KEN
Sbjct: 5 TSTRSKSQPVQRNNYKVLYDPELGIKEN 32
>SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 817
Score = 22.6 bits (46), Expect = 7.5
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +3
Query: 105 AVEKQDAAPEEVTSTEVKDSPIKKSPTKKTEVPESNGKENGTEEVA 242
A DA + + V DSP ++ + +SN K TE+ A
Sbjct: 481 AFSSSDAVLQRIQDNAVVDSPTEELSEQAARNRKSNVKIEYTEDFA 526
>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1485
Score = 22.2 bits (45), Expect = 9.9
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +3
Query: 150 EVKDSPIKKSPTKK 191
E DSPI+K PT++
Sbjct: 1429 EDSDSPIRKRPTRR 1442
>SPAC18G6.09c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 312
Score = 22.2 bits (45), Expect = 9.9
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +3
Query: 129 PEEVTSTEVKDSPIKKSPTKKTEVPESNGKENG 227
P+ + ++ + KS + + ESNGK NG
Sbjct: 41 PQRDGNLQIPNFVKPKSTFATSNIGESNGKRNG 73
>SPAC15A10.09c |||SUR7 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 288
Score = 22.2 bits (45), Expect = 9.9
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -2
Query: 236 FFCAVLFTIALRYFSFFGGRFLN 168
FF + +I + FFG FLN
Sbjct: 191 FFALTIVSIVISCLPFFGPLFLN 213
>SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 867
Score = 22.2 bits (45), Expect = 9.9
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -3
Query: 235 SSVPFSLPLLSGTSVFLVGDFLIGESLTSVEVTS 134
S P+S P+L+ T+ L G +L S ++ V S
Sbjct: 273 SPQPYSGPILASTAPTLDGSYLSNPSNSNPAVMS 306
>SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 417
Score = 22.2 bits (45), Expect = 9.9
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -3
Query: 208 LSGTSVFLVGDFLIGESLTSVEVTSSGAASCF 113
+SGT VF G F G S +V +TS F
Sbjct: 385 VSGTCVFENGAFQNGGSGCTVGITSGSGVFVF 416
>SPBC16A3.08c |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 284
Score = 22.2 bits (45), Expect = 9.9
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +3
Query: 105 AVEKQDAAPEEVTSTEVKDSPIKKSPTKKTE 197
A + + +APEE+ ++ K + KKS K+++
Sbjct: 201 ATKVEKSAPEELFASLKKSASQKKSAAKESK 231
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 913,203
Number of Sequences: 5004
Number of extensions: 13625
Number of successful extensions: 67
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 2,362,478
effective HSP length: 59
effective length of database: 2,067,242
effective search space used: 43412082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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