Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_F16
(243 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y00067-1|CAA68276.1| 916|Homo sapiens NF-M protein. 33 0.17
EF560736-1|ABQ59046.1| 916|Homo sapiens NEFM protein protein. 33 0.17
BC096757-1|AAH96757.1| 916|Homo sapiens neurofilament, medium p... 33 0.17
AF181990-1|AAF00492.1| 260|Homo sapiens neurofilament-3 (150 kD... 33 0.17
Y12065-1|CAA72789.1| 602|Homo sapiens hNop56 protein. 33 0.22
BC104793-1|AAI04794.1| 594|Homo sapiens nucleolar protein 5A pr... 33 0.22
BC104791-1|AAI04792.1| 594|Homo sapiens nucleolar protein 5A (5... 33 0.22
BC004937-1|AAH04937.1| 174|Homo sapiens NOL5A protein protein. 33 0.22
AL049712-4|CAC01444.2| 594|Homo sapiens nucleolar protein 5A (5... 33 0.22
Z69744-1|CAA93625.1| 4005|Homo sapiens ALL-1 protein protein. 32 0.39
L04284-1|AAA58669.1| 3969|Homo sapiens HRX protein. 32 0.39
AY373585-1|AAQ63624.1| 3969|Homo sapiens myeloid/lymphoid or mix... 32 0.39
AB209508-1|BAD92745.1| 2880|Homo sapiens myeloid/lymphoid or mix... 32 0.39
EF560737-1|ABQ59047.1| 877|Homo sapiens NEFM protein protein. 30 1.2
AY354203-1|AAQ63888.1| 1013|Homo sapiens RAN-binding protein 2-l... 29 2.1
AF445413-1|AAN75849.1| 894|Homo sapiens MAP4K3 protein. 29 2.7
AF000145-1|AAC15472.1| 884|Homo sapiens germinal center kinase ... 29 2.7
AC007684-1|AAF19240.1| 712|Homo sapiens unknown protein. 29 2.7
BC100834-1|AAI00835.1| 177|Homo sapiens SLC26A5 protein protein. 28 6.3
BC100833-1|AAI00834.1| 712|Homo sapiens SLC26A5 protein protein. 28 6.3
AY256823-1|AAP31532.1| 685|Homo sapiens prestin isoform SLC26A5... 28 6.3
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein. 28 6.3
AF523354-1|AAP31417.1| 744|Homo sapiens prestin protein. 28 6.3
AF006514-1|AAB87382.1| 1739|Homo sapiens CHD2 protein. 27 8.4
>Y00067-1|CAA68276.1| 916|Homo sapiens NF-M protein.
Length = 916
Score = 33.1 bits (72), Expect = 0.17
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Frame = +3
Query: 90 IMADAAVEKQDAAPEEVTSTEVKD---SPIKKSPTK---KTEVPESNGKENGTEEV 239
++ADA VEK + A V + V++ SP+ KSP + K+ VP+S +E G V
Sbjct: 601 LVADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPV 656
>EF560736-1|ABQ59046.1| 916|Homo sapiens NEFM protein protein.
Length = 916
Score = 33.1 bits (72), Expect = 0.17
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Frame = +3
Query: 90 IMADAAVEKQDAAPEEVTSTEVKD---SPIKKSPTK---KTEVPESNGKENGTEEV 239
++ADA VEK + A V + V++ SP+ KSP + K+ VP+S +E G V
Sbjct: 601 LVADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPV 656
>BC096757-1|AAH96757.1| 916|Homo sapiens neurofilament, medium
polypeptide 150kDa protein.
Length = 916
Score = 33.1 bits (72), Expect = 0.17
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Frame = +3
Query: 90 IMADAAVEKQDAAPEEVTSTEVKD---SPIKKSPTK---KTEVPESNGKENGTEEV 239
++ADA VEK + A V + V++ SP+ KSP + K+ VP+S +E G V
Sbjct: 601 LVADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPV 656
>AF181990-1|AAF00492.1| 260|Homo sapiens neurofilament-3 (150 kD
medium) protein.
Length = 260
Score = 33.1 bits (72), Expect = 0.17
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Frame = +3
Query: 90 IMADAAVEKQDAAPEEVTSTEVKD---SPIKKSPTK---KTEVPESNGKENGTEEV 239
++ADA VEK + A V + V++ SP+ KSP + K+ VP+S +E G V
Sbjct: 164 LVADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPV 219
>Y12065-1|CAA72789.1| 602|Homo sapiens hNop56 protein.
Length = 602
Score = 32.7 bits (71), Expect = 0.22
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +3
Query: 93 MADAAVEKQDAAPEEVTSTEVKDSPIKKSPTKKTEVPESNGKEN 224
+A A+ E + PEE T K P KK K EVP+ NG E+
Sbjct: 465 LALASSENSSSTPEECEETSEK--PKKKKKQKPQEVPQENGMED 506
>BC104793-1|AAI04794.1| 594|Homo sapiens nucleolar protein 5A
protein.
Length = 594
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 93 MADAAVEKQDAAPEEVTSTEVKDSPIKKSPTKKTEVPESNGKEN 224
+A A+ E + PEE E+ + P KK K EVP+ NG E+
Sbjct: 457 LALASSENSSSTPEECE--EMSEKPKKKKKQKPQEVPQENGMED 498
>BC104791-1|AAI04792.1| 594|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 594
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 93 MADAAVEKQDAAPEEVTSTEVKDSPIKKSPTKKTEVPESNGKEN 224
+A A+ E + PEE E+ + P KK K EVP+ NG E+
Sbjct: 457 LALASSENSSSTPEECE--EMSEKPKKKKKQKPQEVPQENGMED 498
>BC004937-1|AAH04937.1| 174|Homo sapiens NOL5A protein protein.
Length = 174
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 93 MADAAVEKQDAAPEEVTSTEVKDSPIKKSPTKKTEVPESNGKEN 224
+A A+ E + PEE E+ + P KK K EVP+ NG E+
Sbjct: 37 LALASSENSSSTPEECE--EMSEKPKKKKKQKPQEVPQENGMED 78
>AL049712-4|CAC01444.2| 594|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 594
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 93 MADAAVEKQDAAPEEVTSTEVKDSPIKKSPTKKTEVPESNGKEN 224
+A A+ E + PEE E+ + P KK K EVP+ NG E+
Sbjct: 457 LALASSENSSSTPEECE--EMSEKPKKKKKQKPQEVPQENGMED 498
>Z69744-1|CAA93625.1| 4005|Homo sapiens ALL-1 protein protein.
Length = 4005
Score = 31.9 bits (69), Expect = 0.39
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 159 DSPIKKSPTKKTEVPESNGKENGTEEV 239
D+ + + K +++P+ NGKENGTE +
Sbjct: 2763 DTSVTATTRKSSQIPKRNGKENGTENL 2789
>L04284-1|AAA58669.1| 3969|Homo sapiens HRX protein.
Length = 3969
Score = 31.9 bits (69), Expect = 0.39
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 159 DSPIKKSPTKKTEVPESNGKENGTEEV 239
D+ + + K +++P+ NGKENGTE +
Sbjct: 2727 DTSVTATTRKSSQIPKRNGKENGTENL 2753
>AY373585-1|AAQ63624.1| 3969|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila)
protein.
Length = 3969
Score = 31.9 bits (69), Expect = 0.39
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 159 DSPIKKSPTKKTEVPESNGKENGTEEV 239
D+ + + K +++P+ NGKENGTE +
Sbjct: 2727 DTSVTATTRKSSQIPKRNGKENGTENL 2753
>AB209508-1|BAD92745.1| 2880|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila)
vari protein.
Length = 2880
Score = 31.9 bits (69), Expect = 0.39
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 159 DSPIKKSPTKKTEVPESNGKENGTEEV 239
D+ + + K +++P+ NGKENGTE +
Sbjct: 1638 DTSVTATTRKSSQIPKRNGKENGTENL 1664
>EF560737-1|ABQ59047.1| 877|Homo sapiens NEFM protein protein.
Length = 877
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 6/50 (12%)
Frame = +3
Query: 90 IMADAAVEKQDAAPEEVTSTEVKD---SPIKKSPTK---KTEVPESNGKE 221
++ADA VEK + A V + V++ SP+ KSP + K+ VP+S +E
Sbjct: 601 LVADAKVEKPEKAKSPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEE 650
>AY354203-1|AAQ63888.1| 1013|Homo sapiens RAN-binding protein 2-like
1 short isoform protein.
Length = 1013
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 114 KQDAAPEEVTSTEVKDSPIKKSPTKK 191
++DA + V+S+ V DSP+ SP +K
Sbjct: 504 REDALDDNVSSSSVHDSPLASSPVRK 529
>AF445413-1|AAN75849.1| 894|Homo sapiens MAP4K3 protein.
Length = 894
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +3
Query: 114 KQDAAPEEVTSTEVK-DSPIKKSPTKKTEVPESNGKENGTEEV 239
+++ E+T +VK D P++K E+P+S+G + +EE+
Sbjct: 323 REEKTRSEITFGQVKFDPPLRKETEPHHELPDSDGFLDSSEEI 365
>AF000145-1|AAC15472.1| 884|Homo sapiens germinal center kinase
related protein kinase protein.
Length = 884
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +3
Query: 114 KQDAAPEEVTSTEVK-DSPIKKSPTKKTEVPESNGKENGTEEV 239
+++ E+T +VK D P++K E+P+S+G + +EE+
Sbjct: 313 REEKTRSEITFGQVKFDPPLRKETEPHHELPDSDGFLDSSEEI 355
>AC007684-1|AAF19240.1| 712|Homo sapiens unknown protein.
Length = 712
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +3
Query: 114 KQDAAPEEVTSTEVK-DSPIKKSPTKKTEVPESNGKENGTEEV 239
+++ E+T +VK D P++K E+P+S+G + +EE+
Sbjct: 323 REEKTRSEITFGQVKFDPPLRKETEPHHELPDSDGFLDSSEEI 365
>BC100834-1|AAI00835.1| 177|Homo sapiens SLC26A5 protein protein.
Length = 177
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 78 NSIIIMADAAVEKQDAAPEEVTSTEVKDSPI 170
N+ ++ ADA V+ +DA E EVK PI
Sbjct: 22 NATVVKADAEVDGEDATKPEEEDGEVKYPPI 52
>BC100833-1|AAI00834.1| 712|Homo sapiens SLC26A5 protein protein.
Length = 712
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 78 NSIIIMADAAVEKQDAAPEEVTSTEVKDSPI 170
N+ ++ ADA V+ +DA E EVK PI
Sbjct: 557 NATVVKADAEVDGEDATKPEEEDGEVKYPPI 587
>AY256823-1|AAP31532.1| 685|Homo sapiens prestin isoform SLC26A5b
protein.
Length = 685
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 78 NSIIIMADAAVEKQDAAPEEVTSTEVKDSPI 170
N+ ++ ADA V+ +DA E EVK PI
Sbjct: 589 NATVVKADAEVDGEDATKPEEEDGEVKYPPI 619
>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
Length = 30000
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +3
Query: 96 ADAAVEKQDAAPEEVTSTEVKDSPIKKSP---TKKTEVP 203
A+ E + AAP +VT K P KK+P KK E+P
Sbjct: 11606 AEVVEEPEPAAPPQVTVPPKKPVPEKKAPAVVAKKPELP 11644
>AF523354-1|AAP31417.1| 744|Homo sapiens prestin protein.
Length = 744
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 78 NSIIIMADAAVEKQDAAPEEVTSTEVKDSPI 170
N+ ++ ADA V+ +DA E EVK PI
Sbjct: 589 NATVVKADAEVDGEDATKPEEEDGEVKYPPI 619
>AF006514-1|AAB87382.1| 1739|Homo sapiens CHD2 protein.
Length = 1739
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 150 EVKDSPIKKSPTKKTEVPESNGKENGTEEVA 242
EVKD ++KSP KK + + N KEN ++++
Sbjct: 1377 EVKDDGLEKSPMKKKQKKKEN-KENKEKQMS 1406
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,534,115
Number of Sequences: 237096
Number of extensions: 487168
Number of successful extensions: 1727
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1724
length of database: 76,859,062
effective HSP length: 58
effective length of database: 63,107,494
effective search space used: 1388364868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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