Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_F15
(197 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1442.14c |||adenosine 5'-monophosphoramidase|Schizosaccharom... 33 0.005
SPCC4G3.02 |aph1||bis|Schizosaccharomyces pombe|chr 3|||Manual 28 0.20
SPCC18.09c |||conserved eukaryotic protein|Schizosaccharomyces p... 27 0.26
SPBC3B9.15c |scp1||sterol regulatory element binding protein Scp... 24 3.2
SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomy... 23 4.2
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 23 4.2
SPCC553.02 |||glutamine-dependent NAD|Schizosaccharomyces pombe|... 23 5.6
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 23 7.4
SPBC106.04 |ada1||adenosine deaminase Ada1 |Schizosaccharomyces ... 22 9.7
SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr 3|||Ma... 22 9.7
SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 22 9.7
>SPCC1442.14c |||adenosine
5'-monophosphoramidase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 133
Score = 33.1 bits (72), Expect = 0.005
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +1
Query: 52 IFGKILRKEIPAKFVYEDDQCVAFHDVNPQAPTHILVIPRKPISQL 189
IF KI++ +IP + E +AF D+ P + H LVIP++ +++
Sbjct: 4 IFCKIVKGDIPCVKLAETALSLAFLDIAPTSKGHALVIPKEHAAKM 49
>SPCC4G3.02 |aph1||bis|Schizosaccharomyces pombe|chr 3|||Manual
Length = 182
Score = 27.9 bits (59), Expect = 0.20
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +1
Query: 79 IPAKFVYEDDQCVAFHDVNPQAPTHILVIPRKPISQL 189
+ ++ Y AF ++ P P H+LVIP++ + +L
Sbjct: 12 VGSQVFYRTKLSAAFVNLKPILPGHVLVIPQRAVPRL 48
>SPCC18.09c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 232
Score = 27.5 bits (58), Expect = 0.26
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 94 VYEDDQCVAFHDVNPQAPTHILVIPRKP 177
+Y DD V D+ P++ H+L++ R P
Sbjct: 52 IYYDDDVVLVRDMFPKSKMHLLLMTRDP 79
>SPBC3B9.15c |scp1||sterol regulatory element binding protein
Scp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1086
Score = 23.8 bits (49), Expect = 3.2
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -3
Query: 177 WLPGYHKDMGW 145
W+PG HKD W
Sbjct: 690 WMPGTHKDDEW 700
>SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 523
Score = 23.4 bits (48), Expect = 4.2
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +1
Query: 10 EVELAKSAAPGGDTIFGKILRKEIPAKFVYEDDQCVAFHDVNPQAPTH 153
+++LAK+ G+ + I ++P + + + +FHD Q+ TH
Sbjct: 268 KIQLAKTQNDLGEFLDYIISNYKVPIESLNQPSDQYSFHDAYLQSYTH 315
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 23.4 bits (48), Expect = 4.2
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 138 TSTNPYPCDTQE 173
TS NPY CD+ E
Sbjct: 128 TSMNPYSCDSNE 139
>SPCC553.02 |||glutamine-dependent NAD|Schizosaccharomyces pombe|chr
3|||Manual
Length = 700
Score = 23.0 bits (47), Expect = 5.6
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = -2
Query: 142 LVGSHHEKLHIDHLHRRILQVFLCV 68
L+GS+H ++ID + ++++F V
Sbjct: 439 LIGSYHTDVNIDTMTSAVVKLFALV 463
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 22.6 bits (46), Expect = 7.4
Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = -1
Query: 191 ESCEIGF-LGITRIWVGA 141
E+ GF LGI+RIWV A
Sbjct: 790 ENLRKGFVLGISRIWVSA 807
>SPBC106.04 |ada1||adenosine deaminase Ada1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 846
Score = 22.2 bits (45), Expect = 9.7
Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = +3
Query: 36 SRWRYYIWENITQRNTC-KIR 95
S W YY++ N+T N+ KIR
Sbjct: 572 SYWLYYMYANMTSLNSWRKIR 592
>SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr
3|||Manual
Length = 462
Score = 22.2 bits (45), Expect = 9.7
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 77 SLRNIFPNIVSPPGAADFASSTS 9
SL I P+ P + FASSTS
Sbjct: 32 SLSEINPSSFQSPSPSPFASSTS 54
>SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 977
Score = 22.2 bits (45), Expect = 9.7
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +1
Query: 55 FGKILRKEIPAKFVYEDDQCVAFHDVNP 138
F + EIP YE + FH NP
Sbjct: 67 FSNLSSDEIPQSSSYEQTRKPFFHHFNP 94
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 912,466
Number of Sequences: 5004
Number of extensions: 15714
Number of successful extensions: 31
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 2,362,478
effective HSP length: 45
effective length of database: 2,137,298
effective search space used: 42745960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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