Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_F15
(197 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71261-3|CAA95802.1| 130|Caenorhabditis elegans Hypothetical pr... 79 6e-16
U53148-1|AAB37071.1| 175|Caenorhabditis elegans Hypothetical pr... 30 0.26
Z74030-19|CAA98449.2| 841|Caenorhabditis elegans Hypothetical p... 26 3.2
Z72508-10|CAA96644.2| 841|Caenorhabditis elegans Hypothetical p... 26 3.2
Z92825-5|CAE17713.2| 191|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 25 7.4
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 25 7.4
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 25 7.4
AF000197-2|ABP57816.1| 90|Caenorhabditis elegans Hypothetical ... 25 7.4
AF016450-10|AAB65990.1| 166|Caenorhabditis elegans Hypothetical... 25 9.8
>Z71261-3|CAA95802.1| 130|Caenorhabditis elegans Hypothetical
protein F21C3.3 protein.
Length = 130
Score = 78.6 bits (185), Expect = 6e-16
Identities = 32/48 (66%), Positives = 41/48 (85%)
Frame = +1
Query: 46 DTIFGKILRKEIPAKFVYEDDQCVAFHDVNPQAPTHILVIPRKPISQL 189
DT+FGKI+RKEIPAK ++EDD+ +AFHDV+PQAP H LVIP++ I L
Sbjct: 20 DTLFGKIIRKEIPAKIIFEDDEALAFHDVSPQAPIHFLVIPKRRIDML 67
>U53148-1|AAB37071.1| 175|Caenorhabditis elegans Hypothetical
protein C26F1.7 protein.
Length = 175
Score = 29.9 bits (64), Expect = 0.26
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +1
Query: 70 RKEIPAKFVYEDDQCVAFHDVNPQAPTHILVIPRKPISQ 186
+KE+ K E+ CV +D+ P+A H LV+ ++ I++
Sbjct: 20 KKELQLK---ENKSCVVINDIKPKAKNHYLVLSKQHIAK 55
>Z74030-19|CAA98449.2| 841|Caenorhabditis elegans Hypothetical
protein F28H7.10a protein.
Length = 841
Score = 26.2 bits (55), Expect = 3.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 49 TIFGKILRKEIPAKFVYEDDQCVAF 123
T+F KIL+ E + Y QCVA+
Sbjct: 349 TMFNKILQLECEKVWTYGSSQCVAY 373
>Z72508-10|CAA96644.2| 841|Caenorhabditis elegans Hypothetical
protein F28H7.10a protein.
Length = 841
Score = 26.2 bits (55), Expect = 3.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 49 TIFGKILRKEIPAKFVYEDDQCVAF 123
T+F KIL+ E + Y QCVA+
Sbjct: 349 TMFNKILQLECEKVWTYGSSQCVAY 373
>Z92825-5|CAE17713.2| 191|Caenorhabditis elegans Hypothetical
protein C13C4.7 protein.
Length = 191
Score = 25.8 bits (54), Expect = 4.2
Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = -3
Query: 177 WLPGYHKDMGWCL-WVHIMKSYTLIIF 100
W PG+ WC+ W+ ++ S T F
Sbjct: 101 WWPGFSLSQSWCVNWILLLNSDTEACF 127
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 25.0 bits (52), Expect = 7.4
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +1
Query: 85 AKFVYEDDQCVAFHDVNPQAP 147
+K+ Y+ + V + D+NPQ+P
Sbjct: 2611 SKYAYKCECGVGYRDINPQSP 2631
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 25.0 bits (52), Expect = 7.4
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +1
Query: 85 AKFVYEDDQCVAFHDVNPQAP 147
+K+ Y+ + V + D+NPQ+P
Sbjct: 3195 SKYAYKCECGVGYRDINPQSP 3215
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 25.0 bits (52), Expect = 7.4
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +1
Query: 85 AKFVYEDDQCVAFHDVNPQAP 147
+K+ Y+ + V + D+NPQ+P
Sbjct: 2611 SKYAYKCECGVGYRDINPQSP 2631
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 25.0 bits (52), Expect = 7.4
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +1
Query: 85 AKFVYEDDQCVAFHDVNPQAP 147
+K+ Y+ + V + D+NPQ+P
Sbjct: 3195 SKYAYKCECGVGYRDINPQSP 3215
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 25.0 bits (52), Expect = 7.4
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +1
Query: 85 AKFVYEDDQCVAFHDVNPQAP 147
+K+ Y+ + V + D+NPQ+P
Sbjct: 3195 SKYAYKCECGVGYRDINPQSP 3215
>AF000197-2|ABP57816.1| 90|Caenorhabditis elegans Hypothetical
protein T21G5.6 protein.
Length = 90
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 130 HHEKLHIDHLHRR 92
HH K HI H HRR
Sbjct: 50 HHHKHHIRHKHRR 62
>AF016450-10|AAB65990.1| 166|Caenorhabditis elegans Hypothetical
protein B0238.12 protein.
Length = 166
Score = 24.6 bits (51), Expect = 9.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 72 QRNTCKIRL*R*SMCSFS*CEPTSTNPYPCDTQE 173
QR C+ R C + CEP+ TNP P T++
Sbjct: 33 QRLPCRGRNEEYKTCGTA-CEPSCTNPNPMCTKQ 65
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,140,824
Number of Sequences: 27780
Number of extensions: 92141
Number of successful extensions: 224
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 224
length of database: 12,740,198
effective HSP length: 45
effective length of database: 11,490,098
effective search space used: 229801960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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