Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_F14
(284 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 145 1e-36
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 145 1e-36
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 145 1e-36
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 45 2e-06
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 29 0.098
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 26 0.92
SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyce... 25 1.6
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 25 2.8
SPBC1718.05 |trs31||TRAPP complex subunit Trs31 |Schizosaccharom... 25 2.8
SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 2.8
SPAC31G5.11 |pac2||cAMP-independent regulatory protein Pac2 |Sch... 25 2.8
SPBC29A3.13 |||PWWP domain protein|Schizosaccharomyces pombe|chr... 24 3.7
SPAC19G12.08 |||fatty acid hydroxylase |Schizosaccharomyces pomb... 24 3.7
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 24 3.7
SPAC12G12.13c |cid14||poly|Schizosaccharomyces pombe|chr 1|||Manual 24 3.7
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 24 4.9
SPAC3C7.01c ||SPAC732.03c|inositol polyphosphate phosphatase |Sc... 24 4.9
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 24 4.9
SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual 23 6.5
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 23 6.5
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 23 6.5
SPBC336.12c |cdc10||MBF transcription factor complex subunit Cdc... 23 6.5
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 23 6.5
SPAC23C11.16 |plo1||Polo kinase Plo1|Schizosaccharomyces pombe|c... 23 6.5
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 23 6.5
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 23 8.5
SPAC16E8.10c |||mitochondrial ribosomal protein subunit S7|Schiz... 23 8.5
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 23 8.5
SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|ch... 23 8.5
SPAC57A10.04 |mug10||sequence orphan|Schizosaccharomyces pombe|c... 23 8.5
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 145 bits (351), Expect = 1e-36
Identities = 62/91 (68%), Positives = 76/91 (83%)
Frame = +1
Query: 10 SSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDA 189
S++IKK+G+NP V FVP+SG+ GDNM+EP+T MPW++GW E K G +GK L+EA+D+
Sbjct: 173 SNFIKKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGWQKETKAGVVKGKTLLEAIDS 232
Query: 190 ILPSARPTDKALRLPLQDVYKIGGIGTVPVG 282
I P ARPTDK LRLPLQDVYKIGGIGTVPVG
Sbjct: 233 IEPPARPTDKPLRLPLQDVYKIGGIGTVPVG 263
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 145 bits (351), Expect = 1e-36
Identities = 62/91 (68%), Positives = 76/91 (83%)
Frame = +1
Query: 10 SSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDA 189
S++IKK+G+NP V FVP+SG+ GDNM+EP+T MPW++GW E K G +GK L+EA+D+
Sbjct: 173 SNFIKKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGWQKETKAGVVKGKTLLEAIDS 232
Query: 190 ILPSARPTDKALRLPLQDVYKIGGIGTVPVG 282
I P ARPTDK LRLPLQDVYKIGGIGTVPVG
Sbjct: 233 IEPPARPTDKPLRLPLQDVYKIGGIGTVPVG 263
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 145 bits (351), Expect = 1e-36
Identities = 62/91 (68%), Positives = 76/91 (83%)
Frame = +1
Query: 10 SSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDA 189
S++IKK+G+NP V FVP+SG+ GDNM+EP+T MPW++GW E K G +GK L+EA+D+
Sbjct: 173 SNFIKKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGWQKETKAGVVKGKTLLEAIDS 232
Query: 190 ILPSARPTDKALRLPLQDVYKIGGIGTVPVG 282
I P ARPTDK LRLPLQDVYKIGGIGTVPVG
Sbjct: 233 IEPPARPTDKPLRLPLQDVYKIGGIGTVPVG 263
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 45.2 bits (102), Expect = 2e-06
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +1
Query: 19 IKKIGYNPAAVAFVPISGWHGDNMLEPSTK--MPWFKGWLVERKEGKAEGKCLIEALDAI 192
IK +G+ + V FVPIS G N+++ + W+KG L+ ALD +
Sbjct: 347 IKMVGFKTSNVHFVPISAISGTNLIQKDSSDLYKWYKG------------PTLLSALDQL 394
Query: 193 LPSARPTDKALRLPLQDVYK 252
+P +P K LRL + DVY+
Sbjct: 395 VPPEKPYRKPLRLSIDDVYR 414
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 29.5 bits (63), Expect = 0.098
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 169 LIEALDAILP-SARPTDKALRLPLQDVYKIGGIGTVPVG 282
L+EA+D+ + R TD + ++DV+ I G GTV G
Sbjct: 234 LMEAVDSYITLPERKTDVPFLMAIEDVFSISGRGTVVTG 272
>SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1588
Score = 26.2 bits (55), Expect = 0.92
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = -3
Query: 249 VYVLQGKTESLVSGASRRKDGVEGLNKAFTFSLSFFTLNQPSLEPWHFGGRLQHVI 82
V++ Q + S++ G + + V LNKAF+ S + F + S P HF ++ +V+
Sbjct: 1522 VWLSQAYSPSVLQGTT---ENVAFLNKAFSASANLFDVLPVSNTPSHF-SKMDYVL 1573
>SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1112
Score = 25.4 bits (53), Expect = 1.6
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +1
Query: 127 WLVERKEGKAEGKCLIEALDAILPSARPTDKALRLP 234
+L+ + K G E++DA+LP+ + +L +P
Sbjct: 628 YLLSSENAKDTGDIKSESIDAVLPTLETSSPSLSIP 663
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 24.6 bits (51), Expect = 2.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 166 CLIEALDAILPSARPTDKALRLPLQD 243
CLIE +AILP +DK L + +
Sbjct: 1349 CLIEKSNAILPHGSTSDKLFLLEIPE 1374
>SPBC1718.05 |trs31||TRAPP complex subunit Trs31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 209
Score = 24.6 bits (51), Expect = 2.8
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 230 FPCKTYTKSAVLEQYPW 280
FPCK S L QYP+
Sbjct: 173 FPCKASAHSVPLSQYPY 189
>SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 682
Score = 24.6 bits (51), Expect = 2.8
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 184 DAILPSARPTDKALRLPLQDVYKIGGIGTVPV 279
+ I P A+P+D+ L + + +GT+PV
Sbjct: 505 ERIEPEAKPSDETLTVRSSRDLSVHNVGTLPV 536
>SPAC31G5.11 |pac2||cAMP-independent regulatory protein Pac2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 235
Score = 24.6 bits (51), Expect = 2.8
Identities = 13/53 (24%), Positives = 21/53 (39%)
Frame = -1
Query: 200 DGRMASRASIRHLPSAFPSLRSTNHPLNHGILVDGSNMLSPCQPEMGTKATAA 42
DG+ S + + + + P +HG+ DGS SP G + A
Sbjct: 61 DGKSWSASRVSGSFLTYREMEGKRKPYHHGLSTDGSLKRSPSADTTGNSSLNA 113
>SPBC29A3.13 |||PWWP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 359
Score = 24.2 bits (50), Expect = 3.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 79 GDNMLEPSTKMPWFKGWLVERKEGK 153
GD +L + PW+ L+ RKE K
Sbjct: 53 GDRILVKAPGYPWWPALLLRRKETK 77
>SPAC19G12.08 |||fatty acid hydroxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 347
Score = 24.2 bits (50), Expect = 3.7
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1
Query: 85 NMLEPSTKMPWF 120
N LEP TK PW+
Sbjct: 148 NFLEPLTKTPWY 159
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 24.2 bits (50), Expect = 3.7
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = -3
Query: 231 KTESLVSGASRRKDGVEGLNKAFTFSLSFFTLNQPSLEPWHFG 103
+T L S +S + VEGLN S N PS + HFG
Sbjct: 309 ETSELSSTSSEQTSDVEGLNAYNNLGASSDIENAPSSQ-LHFG 350
>SPAC12G12.13c |cid14||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 684
Score = 24.2 bits (50), Expect = 3.7
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 100 STKMPWFKGWLVERKEGKAEGKCLIEALDAILPSARPTDKALRLPL 237
S PW + + VER+ + + ++ +D I P+ P + A+R L
Sbjct: 222 SQSCPWHRQYKVEREVSRIFHQDILHFIDYITPT--PEEHAVRKTL 265
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 23.8 bits (49), Expect = 4.9
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 110 CHGSRDGWLSVKKERLKVNALLRPSTPSFRLL 205
C GS G+ + E +LL P+ SFR L
Sbjct: 994 CVGSFKGFDIISLENAVFQSLLNPADTSFRFL 1025
>SPAC3C7.01c ||SPAC732.03c|inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 611
Score = 23.8 bits (49), Expect = 4.9
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = -1
Query: 260 PPILYTSCRGRRRALSVGRADGRMASRASI 171
P +Y SC ++ +L + R DG ++ S+
Sbjct: 9 PDSIYLSCSKKKASLRIDRVDGCLSLSNSL 38
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 23.8 bits (49), Expect = 4.9
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +1
Query: 13 SYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 126
SYI +P +G+ +N+++P + P FKG
Sbjct: 166 SYISSGYLHPKTSPIFKKNGYATENVVDPISSSPRFKG 203
>SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 23.4 bits (48), Expect = 6.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 133 VERKEGKAEGKCLIEALDAILPS 201
+E EG+ EG+CL L A++ S
Sbjct: 266 LETIEGEEEGECLFNNLKALIYS 288
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 23.4 bits (48), Expect = 6.5
Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -1
Query: 185 SRASIRHLPSAFP-SLRSTNHPLNHG 111
+ + + H P A P S R+ +PLN+G
Sbjct: 881 ANSPVHHYPFATPPSQRANKYPLNNG 906
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 23.4 bits (48), Expect = 6.5
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1
Query: 176 SIRHLPSAFPSLRSTNHPLNHGILVDGSNMLS 81
S+ PS +TN PL+H +V SN S
Sbjct: 158 SVNSPPSYGIMASATNQPLSHPTIVPSSNSSS 189
>SPBC336.12c |cdc10||MBF transcription factor complex subunit
Cdc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 23.4 bits (48), Expect = 6.5
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = -1
Query: 260 PPILYTSCRGRRRALSVGRADGRMASRASIRHLPSAFPSLRSTNHPLNHGILV 102
PPIL R +R + V D +S+ + S FP NH L+ LV
Sbjct: 253 PPILEQ--RLKRHRIDVSDEDLHPSSQLNDNEASSLFPDTPRLNHSLSFVSLV 303
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 23.4 bits (48), Expect = 6.5
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = -1
Query: 242 SCRGRRRALSVGRADGRMASRASIRHLPSAFPSLRSTNHPLNHGIL 105
S + R L + R AS+ + S+ RST PL+H L
Sbjct: 738 SVKSRESRLKKEKHKNRPASKGTYTTYTSSEERQRSTEDPLSHDTL 783
>SPAC23C11.16 |plo1||Polo kinase Plo1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 683
Score = 23.4 bits (48), Expect = 6.5
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 125 DGWLSVKKERLKVNALLRPST 187
D W+SVKK LK+ L T
Sbjct: 458 DIWISVKKTALKIGMALEAHT 478
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 23.4 bits (48), Expect = 6.5
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 233 GRRRALSVGRADGRMASRASIRHLPSAFPSLRSTNHP 123
G+ R++ GRA ++S S H P + S TN P
Sbjct: 295 GKYRSVQNGRALNYVSSFNSDSHSPKDYISQSYTNEP 331
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 23.0 bits (47), Expect = 8.5
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -1
Query: 260 PPILYTSCRGRRRALSVGRADGRMASRASIRHLPS 156
PP + S G R SVG +S S+R PS
Sbjct: 143 PPQFFHSEAGERPTPSVGAPSSLASSMDSVRVAPS 177
>SPAC16E8.10c |||mitochondrial ribosomal protein subunit
S7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 259
Score = 23.0 bits (47), Expect = 8.5
Identities = 8/34 (23%), Positives = 19/34 (55%)
Frame = -3
Query: 117 PWHFGGRLQHVISVPARNGYESDGSRIVTNFLDV 16
P+ +QH++++ R+G ++ +IV L +
Sbjct: 119 PFQVDSTVQHLVNLIMRDGKKAKAEKIVATALSI 152
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 23.0 bits (47), Expect = 8.5
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 11 LPTSRKLVTIRLPSLS 58
LPTS K++T PS+S
Sbjct: 420 LPTSSKMITTTTPSVS 435
>SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1374
Score = 23.0 bits (47), Expect = 8.5
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -3
Query: 186 VEGLNKAFTFSLSFFTLNQPSLEPWHFGG 100
VE AFT SL TLN P++ F G
Sbjct: 368 VERKATAFTLSLFMKTLNLPNIRAHSFIG 396
>SPAC57A10.04 |mug10||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 338
Score = 23.0 bits (47), Expect = 8.5
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 179 PSTPSFRLLAPLTRLSVFPCKTYTKSAVLEQYPWV 283
PS+ + +LL PL L +P +L +YP++
Sbjct: 143 PSSCNSQLLIPLQHLLRYPIHLARVCKMLRKYPFL 177
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.139 0.438
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,378,562
Number of Sequences: 5004
Number of extensions: 27492
Number of successful extensions: 106
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 105
length of database: 2,362,478
effective HSP length: 62
effective length of database: 2,052,230
effective search space used: 65671360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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