Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_F14
(284 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 109 3e-25
03_01_0547 + 4093196-4093657,4094267-4095148 109 3e-25
03_01_0544 + 4082528-4082989,4083585-4084466 109 3e-25
03_01_0543 + 4076981-4077442,4078145-4079026 109 3e-25
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 56 6e-09
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 38 0.001
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 38 0.001
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 35 0.009
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 35 0.009
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 35 0.009
02_04_0462 + 23131433-23132836 30 0.25
05_04_0178 + 18775074-18775928 29 0.44
12_01_0346 + 2652181-2653566 28 1.0
06_03_1231 + 28580006-28580934,28581810-28582086 28 1.0
02_02_0101 - 6788090-6788356,6788770-6788940 28 1.0
02_04_0630 - 24600242-24600839,24600948-24601077,24601659-24601800 28 1.3
07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950 27 1.8
02_05_1276 + 35397948-35398298,35398937-35401738,35402085-354023... 27 1.8
11_06_0760 + 27017956-27018433,27018487-27019234,27023760-270243... 27 2.3
12_01_0314 - 2395113-2395760,2396151-2396738,2397218-2397252,239... 27 3.1
04_01_0300 - 4014636-4015544 27 3.1
02_01_0772 - 5755371-5756654,5757808-5757834 26 4.1
02_01_0387 - 2804990-2805059,2805106-2806086,2806856-2806875 26 4.1
01_07_0140 - 41387166-41388488 26 4.1
08_02_1457 + 27260841-27260965,27261126-27261246,27263455-272635... 26 5.4
08_01_0862 - 8435171-8435551 26 5.4
03_06_0136 + 31933843-31934715,31934906-31935021,31935233-319354... 26 5.4
02_05_1186 + 34816774-34817055,34817216-34817334,34818139-348186... 26 5.4
11_06_0711 - 26508228-26508488,26508970-26509084,26509179-265094... 25 7.1
10_08_0475 + 18182412-18183270,18183384-18183880 25 7.1
08_02_1312 + 26055372-26056056,26056935-26057187,26057277-260580... 25 7.1
06_03_1246 + 28667511-28667750,28667846-28668037,28669145-286693... 25 7.1
04_04_0340 + 24517562-24520318 25 7.1
02_02_0193 + 7649488-7649556,7651372-7651833,7652117-7652145,765... 25 7.1
01_06_1058 - 34147025-34147069,34147190-34147339,34147983-341481... 25 7.1
11_06_0277 + 21843658-21845220,21846533-21846718,21847037-218471... 25 9.4
11_01_0530 - 4164590-4165264,4165378-4165467,4167482-4168011,416... 25 9.4
08_02_0715 - 20352613-20352852,20352926-20352982,20354208-203543... 25 9.4
05_06_0219 + 26479708-26479710,26481045-26481173,26481675-264818... 25 9.4
05_04_0391 - 20862788-20862935,20863704-20863822,20864922-20865332 25 9.4
05_03_0314 + 12203589-12204675,12207915-12208861 25 9.4
05_01_0500 - 4171090-4171191,4171989-4172061,4172376-4172701,417... 25 9.4
01_01_0126 - 1159370-1159657,1161665-1161811,1162832-1162891,116... 25 9.4
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 109 bits (263), Expect = 3e-25
Identities = 55/91 (60%), Positives = 64/91 (70%)
Frame = +1
Query: 10 SSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDA 189
SSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG L+EALD
Sbjct: 175 SSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQ 222
Query: 190 ILPSARPTDKALRLPLQDVYKIGGIGTVPVG 282
I RP+DK LRLPLQDVYKIGGIGTVPVG
Sbjct: 223 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVG 253
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 109 bits (263), Expect = 3e-25
Identities = 55/91 (60%), Positives = 64/91 (70%)
Frame = +1
Query: 10 SSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDA 189
SSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG L+EALD
Sbjct: 175 SSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQ 222
Query: 190 ILPSARPTDKALRLPLQDVYKIGGIGTVPVG 282
I RP+DK LRLPLQDVYKIGGIGTVPVG
Sbjct: 223 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVG 253
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 109 bits (263), Expect = 3e-25
Identities = 55/91 (60%), Positives = 64/91 (70%)
Frame = +1
Query: 10 SSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDA 189
SSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG L+EALD
Sbjct: 175 SSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQ 222
Query: 190 ILPSARPTDKALRLPLQDVYKIGGIGTVPVG 282
I RP+DK LRLPLQDVYKIGGIGTVPVG
Sbjct: 223 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVG 253
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 109 bits (263), Expect = 3e-25
Identities = 55/91 (60%), Positives = 64/91 (70%)
Frame = +1
Query: 10 SSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDA 189
SSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG L+EALD
Sbjct: 175 SSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQ 222
Query: 190 ILPSARPTDKALRLPLQDVYKIGGIGTVPVG 282
I RP+DK LRLPLQDVYKIGGIGTVPVG
Sbjct: 223 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVG 253
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 55.6 bits (128), Expect = 6e-09
Identities = 28/90 (31%), Positives = 49/90 (54%)
Frame = +1
Query: 13 SYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAI 192
++++ GY +AVA+VPIS +N++ ++ W +G CL++A+D +
Sbjct: 403 AFLRSCGYKDSAVAWVPISAMENENLMTTASDTR-LSSWY--------DGNCLLKAIDTL 453
Query: 193 LPSARPTDKALRLPLQDVYKIGGIGTVPVG 282
P +R K LRLP+ DV+ +G V +G
Sbjct: 454 PPPSRDVSKPLRLPICDVFSSHKLGQVAIG 483
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 37.9 bits (84), Expect = 0.001
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +1
Query: 16 YIKKIGYNPAA-VAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAI 192
+++ GYN V F+PISG G NM K W +G CL E LD I
Sbjct: 168 FLRSSGYNVKKDVHFLPISGLLGSNMKTRMDKS--ICSWW--------DGPCLFEVLDCI 217
Query: 193 LPSARPTDKALRLPLQDVYKIGGIGTVPVG 282
R +R+P+ D YK +GTV +G
Sbjct: 218 EVPLRDPKGPVRMPIIDKYK--DMGTVVMG 245
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 37.9 bits (84), Expect = 0.001
Identities = 32/90 (35%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = +1
Query: 16 YIKKIGYNPAA-VAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAI 192
++K GYN V F+PISG G NM K W G CL E LD I
Sbjct: 123 FLKSSGYNVKKDVHFLPISGLLGTNMKTRMDKSNC--SWW--------SGPCLFEVLDCI 172
Query: 193 LPSARPTDKALRLPLQDVYKIGGIGTVPVG 282
R +R+P+ D YK +GTV +G
Sbjct: 173 QVPLRDPKGPVRMPIIDKYK--DMGTVVMG 200
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 35.1 bits (77), Expect = 0.009
Identities = 20/85 (23%), Positives = 42/85 (49%)
Frame = +1
Query: 13 SYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAI 192
S+++ + ++V ++P+S N+++ + + W +G CL++A+D++
Sbjct: 419 SFLRSCNFKDSSVTWIPLSAVENQNLIKIPSDVR-LTSWY--------QGFCLLDAIDSL 469
Query: 193 LPSARPTDKALRLPLQDVYKIGGIG 267
+R K L LP+ DV K G
Sbjct: 470 QLPSRDVSKPLILPICDVIKSQSTG 494
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 35.1 bits (77), Expect = 0.009
Identities = 20/85 (23%), Positives = 42/85 (49%)
Frame = +1
Query: 13 SYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAI 192
S+++ + ++V ++P+S N+++ + + W +G CL++A+D++
Sbjct: 419 SFLRSCNFKDSSVTWIPLSAVENQNLIKIPSDVR-LTSWY--------QGFCLLDAIDSL 469
Query: 193 LPSARPTDKALRLPLQDVYKIGGIG 267
+R K L LP+ DV K G
Sbjct: 470 QLPSRDVSKPLILPICDVIKSQSTG 494
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 35.1 bits (77), Expect = 0.009
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 169 LIEALDAILPS-ARPTDKALRLPLQDVYKIGGIGTVPVG 282
L++A+D +P R DK+ +P++DV+ I G GTV G
Sbjct: 249 LMDAVDEYIPDPVRQLDKSFLMPIEDVFSIQGRGTVVTG 287
>02_04_0462 + 23131433-23132836
Length = 467
Score = 30.3 bits (65), Expect = 0.25
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 169 LIEALDAILP-SARPTDKALRLPLQDVYKIGGIGTVPVG 282
LI+++D +P R TD L ++DV+ I G GTV G
Sbjct: 260 LIDSVDNYIPVPQRQTDLPFLLAVEDVFSITGRGTVATG 298
>05_04_0178 + 18775074-18775928
Length = 284
Score = 29.5 bits (63), Expect = 0.44
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -1
Query: 281 PTGTVPIPPILYTSCRGRRRALSV-GRADGRMA 186
P G P+PP L T RG R V R DGR+A
Sbjct: 138 PRGGAPLPPPLTTLARGGSRVRMVQERRDGRLA 170
>12_01_0346 + 2652181-2653566
Length = 461
Score = 28.3 bits (60), Expect = 1.0
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -1
Query: 194 RMASRASIRHLPSAFPSLRSTNHPLNHGILVDGSNML 84
RMA ++R + P+ + +H L+HG L DG N+L
Sbjct: 201 RMAGLTTVRIIDE--PTAAAVSHGLHHGRLRDGGNVL 235
>06_03_1231 + 28580006-28580934,28581810-28582086
Length = 401
Score = 28.3 bits (60), Expect = 1.0
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +2
Query: 11 LPTSRKLVTIRLPSLSYPFLAGTEITCWSRPPKCHGSRDGWLSVKKERLKVN 166
LP + K+ TI + L + + P C G GW+ + + RL +N
Sbjct: 79 LPANMKVSTIAVAPLDSIHIVAPNVNNRPSCPLCRGDVIGWIVIGEARLHLN 130
>02_02_0101 - 6788090-6788356,6788770-6788940
Length = 145
Score = 28.3 bits (60), Expect = 1.0
Identities = 22/73 (30%), Positives = 32/73 (43%)
Frame = +2
Query: 17 TSRKLVTIRLPSLSYPFLAGTEITCWSRPPKCHGSRDGWLSVKKERLKVNALLRPSTPSF 196
TS + V R P+ P AGTE+T + +R ++ +E + P S
Sbjct: 9 TSPRQVAARSPADHIPAAAGTEVTARATTAMEASAR----TIAEEAVVRAPSANPYNSSE 64
Query: 197 RLLAPLTRLSVFP 235
R L PL R + FP
Sbjct: 65 RCLLPLARPNCFP 77
>02_04_0630 - 24600242-24600839,24600948-24601077,24601659-24601800
Length = 289
Score = 27.9 bits (59), Expect = 1.3
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 229 DGEPCQWGEQTEGWRRGP 176
+G+ WG + GWR+GP
Sbjct: 2 EGQQFAWGREEGGWRKGP 19
>07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950
Length = 346
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 128 HPLNHGILVDGSNMLSPCQPEMGTKATAAG 39
HP + +L G N L+ C P + AT AG
Sbjct: 258 HPSLNQLLGVGDNFLAECYPSTASTATVAG 287
>02_05_1276 + 35397948-35398298,35398937-35401738,35402085-35402306,
35402503-35402562,35402615-35402698,35402740-35402816,
35403147-35403363
Length = 1270
Score = 27.5 bits (58), Expect = 1.8
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 132 QPSLEPWHFGGRLQHVISVPARN 64
QP L W GG ++SVPA N
Sbjct: 1108 QPELTAWLVGGTALQIVSVPALN 1130
>11_06_0760 +
27017956-27018433,27018487-27019234,27023760-27024378,
27030755-27032440
Length = 1176
Score = 27.1 bits (57), Expect = 2.3
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 166 CLIEALDAILPSARPTDKALRLPLQDVYK 252
C +E + IL + T KAL+LP +DV K
Sbjct: 793 CQLERVANILGGNKRTRKALKLPAEDVKK 821
>12_01_0314 -
2395113-2395760,2396151-2396738,2397218-2397252,
2397546-2397632,2397913-2397985,2398648-2398714,
2398795-2398931,2400196-2400217,2400733-2400807,
2402281-2402365,2402605-2403334
Length = 848
Score = 26.6 bits (56), Expect = 3.1
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 59 YPFLAGTEITCWSRPPKCHGSRD 127
Y F+ + CWSR P SRD
Sbjct: 755 YVFILVLAMICWSRSPSAFSSRD 777
>04_01_0300 - 4014636-4015544
Length = 302
Score = 26.6 bits (56), Expect = 3.1
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = -1
Query: 236 RGRRRALSVGRA-DGRMASRASIRHLPSAFPSLRSTNHPLNHGILVDGSNMLSPC-QPEM 63
R R R S R+ GR + +R P S S N+P + +L + + SPC QP
Sbjct: 5 RSRNRERSDPRSRSGRSREPSKVR--PPLSSSFTSQNNPASDTLLPSPNRLASPCKQPSS 62
Query: 62 GTKATAAG 39
K + G
Sbjct: 63 VRKPSPDG 70
>02_01_0772 - 5755371-5756654,5757808-5757834
Length = 436
Score = 26.2 bits (55), Expect = 4.1
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -1
Query: 260 PPILYTSCRGRRRALSVGRADGRMASRASIRHLPSAFPSLRSTNHPL 120
PP+ ++C R G A R+ RA A PSLR++ HPL
Sbjct: 8 PPVDSSACLCRVERSVAGAAAARLMPRAKA----CAQPSLRASIHPL 50
>02_01_0387 - 2804990-2805059,2805106-2806086,2806856-2806875
Length = 356
Score = 26.2 bits (55), Expect = 4.1
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +2
Query: 11 LPTSRKLVTIRLPSLSYPFLAGTEITCWSRPPKCHGSRDGWLSVKKERLKVN 166
LPT+ K+ + L + + T P C G GW+ + + RL +N
Sbjct: 103 LPTNMKVPSFNGAPLDSIHIISSNTTDRPACPLCRGDVIGWVVIDEARLHLN 154
>01_07_0140 - 41387166-41388488
Length = 440
Score = 26.2 bits (55), Expect = 4.1
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 95 SRPPKCHGSRDGWLSVKKERLKVNALLRPSTPSFRLLAPLTRLSVFPCKTY 247
+RP + G GWL V E + +LL P T ++ PL ++ F C+ +
Sbjct: 93 ARPHRIIGCSHGWLVVVDEACRA-SLLEPFTDGAQV--PLPPVTSFDCEYF 140
>08_02_1457 +
27260841-27260965,27261126-27261246,27263455-27263543,
27263776-27263860,27263970-27264074,27264446-27264527,
27264573-27264686,27265029-27265330,27265519-27266114,
27266216-27266376,27266489-27266592,27266697-27266856,
27266942-27267105,27267213-27267545,27267640-27267930,
27268276-27268359,27268430-27268563,27268665-27268892,
27268993-27269164,27269263-27269517,27269778-27270047
Length = 1324
Score = 25.8 bits (54), Expect = 5.4
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Frame = +2
Query: 77 TEITCWSRPPKCHGSRDGWLSV---KKERLKVNA 169
T T W PP H G+L + KKERL V A
Sbjct: 14 TAETRWLSPPLTHDDNRGFLQMLREKKERLGVGA 47
>08_01_0862 - 8435171-8435551
Length = 126
Score = 25.8 bits (54), Expect = 5.4
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -1
Query: 251 LYTSCRGRRRALSVGRADGRMASRASIRHLPSAFPSLRS 135
L TSC GRRR G + S A IRH P+ +LR+
Sbjct: 63 LPTSC-GRRRRRGEGGQERHRPSHARIRH-PAVAAALRT 99
>03_06_0136 +
31933843-31934715,31934906-31935021,31935233-31935408,
31935846-31936036,31936119-31936205,31936304-31936461,
31936555-31936765,31936856-31937005
Length = 653
Score = 25.8 bits (54), Expect = 5.4
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 275 GTVPIPPILYTSCRGRRRALSVG 207
G P P +LY S G +AL+ G
Sbjct: 51 GPAPTPTLLYASATGTSKALAAG 73
>02_05_1186 +
34816774-34817055,34817216-34817334,34818139-34818664,
34818760-34818977,34819639-34819966
Length = 490
Score = 25.8 bits (54), Expect = 5.4
Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = -2
Query: 235 GEDGEPCQWGEQTEG-WRRG 179
G+DGE C +TEG W+RG
Sbjct: 242 GDDGEVCISFRETEGHWKRG 261
>11_06_0711 -
26508228-26508488,26508970-26509084,26509179-26509451,
26509629-26510197,26510489-26510597,26511002-26511544,
26511645-26511763,26511893-26512120,26512199-26512315,
26512410-26512506,26513169-26513569
Length = 943
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 42 GCRRFRTHFWLARR 83
G RR RTH W A+R
Sbjct: 103 GARRLRTHLWHAKR 116
>10_08_0475 + 18182412-18183270,18183384-18183880
Length = 451
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 92 WSRPPKCHGSRDGWLSV 142
W+ PP CHG R W V
Sbjct: 42 WTGPP-CHGGRSRWYGV 57
>08_02_1312 +
26055372-26056056,26056935-26057187,26057277-26058081,
26058828-26058952,26059081-26059165,26059473-26059626,
26059724-26059761,26059842-26060109,26060257-26060380,
26060508-26060868,26061904-26062272,26062528-26062609,
26063042-26063193
Length = 1166
Score = 25.4 bits (53), Expect = 7.1
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -1
Query: 272 TVPIPPILYTSCRGRRRALSVGRADGRMAS 183
+VP+PP+L + G DGR+ S
Sbjct: 160 SVPVPPVLCVEADASNALVWTGHKDGRIMS 189
>06_03_1246 +
28667511-28667750,28667846-28668037,28669145-28669310,
28669785-28670200
Length = 337
Score = 25.4 bits (53), Expect = 7.1
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -1
Query: 218 LSVGRADGRMASRASIRH-LPSAFPSLRSTN 129
+ +GR DG++ +RA ++H LP A L N
Sbjct: 152 VELGRLDGKVGTRAVVKHSLPGAAFDLDQLN 182
>04_04_0340 + 24517562-24520318
Length = 918
Score = 25.4 bits (53), Expect = 7.1
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +1
Query: 1 ARGSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKA 156
+ G S+ K+ + + P+ +H D + + PW +G L+E + KA
Sbjct: 508 SEGKSFFNKLLLSNGFIT--PVKKYHCDKVHSCKVQ-PWIRGLLIEAAKSKA 556
>02_02_0193 +
7649488-7649556,7651372-7651833,7652117-7652145,
7653284-7653391,7653544-7653708,7653882-7653987,
7654105-7654731
Length = 521
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 247 IRLAGEDGEPCQWGEQTEG 191
+R AGEDGE GE+ EG
Sbjct: 421 VRGAGEDGEAAVVGEEPEG 439
>01_06_1058 -
34147025-34147069,34147190-34147339,34147983-34148117,
34148391-34148449,34149142-34149258,34149448-34149625,
34149715-34149798,34150133-34150201,34150385-34150525,
34150781-34150873,34151338-34151466,34152033-34152371,
34152624-34152674
Length = 529
Score = 25.4 bits (53), Expect = 7.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 243 VLQGKTESLVSGASRRKDGVEGLNKAFTFSLSFFTLNQPS 124
V +G E + +SR K+ +EGL K + L+QPS
Sbjct: 234 VEKGLQEHDAASSSREKEEIEGLRKEVREARRIKMLHQPS 273
>11_06_0277 +
21843658-21845220,21846533-21846718,21847037-21847165,
21847256-21847415,21847846-21847955,21848038-21848247,
21848473-21848730,21848810-21848885,21849217-21849350,
21849928-21850007,21850265-21850316
Length = 985
Score = 25.0 bits (52), Expect = 9.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 224 RALSVGRADGRMASRASIRH 165
R+LS+G DG A R + RH
Sbjct: 45 RSLSIGEDDGAAAERLAARH 64
>11_01_0530 -
4164590-4165264,4165378-4165467,4167482-4168011,
4168094-4168603,4172207-4172432
Length = 676
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -1
Query: 116 HGILVDGSNMLSPCQPEMGTKATAAGL*PIFL 21
HG V+ ++S PE+ ++ AAG+ P++L
Sbjct: 177 HGAAVEA--LVSAAAPELSSELNAAGVSPLYL 206
>08_02_0715 -
20352613-20352852,20352926-20352982,20354208-20354339,
20354754-20354828,20355779-20355943,20356031-20356263,
20356484-20356574,20356789-20357223,20357911-20357976,
20358688-20358807,20358915-20359121
Length = 606
Score = 25.0 bits (52), Expect = 9.4
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = -3
Query: 204 SRRKDGVEGLNKAFTFSLSFFTLNQ 130
+R++ GVE L+K TF+L+ +T ++
Sbjct: 520 NRKRQGVEVLSKMITFALTQWTKDE 544
>05_06_0219 + 26479708-26479710,26481045-26481173,26481675-26481818,
26481936-26482081,26482185-26482341,26482489-26482547,
26482787-26482946,26483020-26483169,26483279-26483415,
26483518-26483664,26483733-26483834,26483917-26483974,
26484084-26484185,26484322-26484379,26484717-26484775,
26486488-26486525,26486688-26486814,26486900-26487067,
26487879-26488010,26488089-26488198,26488273-26488333,
26488761-26488938,26489041-26489246,26489431-26489550,
26489631-26489729,26489968-26490156,26490291-26490430,
26491149-26491316,26491438-26491605,26491764-26491931,
26492250-26492417,26492533-26492700,26492853-26493020,
26493118-26493285,26493471-26493638,26493756-26493920,
26494679-26494850,26495012-26495175,26495296-26495405,
26495481-26495596,26495686-26495766,26495849-26496034,
26496203-26496547,26496637-26496777,26496869-26496916,
26497162-26497242,26497350-26497406,26497495-26497575,
26497675-26497757,26497842-26497968
Length = 2159
Score = 25.0 bits (52), Expect = 9.4
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 127 WLVERKEGKAEGKCLIEA 180
WL ER+E + K LIEA
Sbjct: 1128 WLTERQESETTNKLLIEA 1145
>05_04_0391 - 20862788-20862935,20863704-20863822,20864922-20865332
Length = 225
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = -2
Query: 163 YLQPFLLYAQPTIP*TMAFWWTAPTCYLRASQKWVRKR 50
+L+ F +P + W A C R S++W RK+
Sbjct: 11 FLRQFSASDGAPLPRELGEEWAAAECGRRGSRRWSRKK 48
>05_03_0314 + 12203589-12204675,12207915-12208861
Length = 677
Score = 25.0 bits (52), Expect = 9.4
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = -1
Query: 119 NHGILVDGSNMLSPCQPEMGT 57
+HG+ + + M+ PC P++GT
Sbjct: 467 SHGMPPNQNYMIQPCPPQIGT 487
>05_01_0500 -
4171090-4171191,4171989-4172061,4172376-4172701,
4173164-4173555,4174521-4174853,4177118-4177209,
4178052-4178111,4178760-4178903,4180142-4180213,
4180345-4180510,4180776-4180923
Length = 635
Score = 25.0 bits (52), Expect = 9.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 125 DGWLSVKKERLKVNALLRPSTPSFRLLAPL 214
DG + K E LK +PSTP F L +P+
Sbjct: 528 DGSVVEKWETLKDAERSKPSTPEFMLSSPV 557
>01_01_0126 -
1159370-1159657,1161665-1161811,1162832-1162891,
1163021-1163203,1163336-1163569
Length = 303
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 79 GDNMLEPSTKMPWFKGWLVERKEGKAEGK 165
G++ EPSTK P+F + V+ + A+G+
Sbjct: 261 GNDGREPSTKDPFFVWFYVDEEIAVAQGR 289
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.139 0.438
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,703,548
Number of Sequences: 37544
Number of extensions: 209372
Number of successful extensions: 820
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 291966432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -