Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_F14
(284 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 158 7e-40
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 158 7e-40
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 158 7e-40
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 52 7e-08
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 40 4e-04
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 40 4e-04
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 31 0.10
AC024859-2|AAK29971.2| 502|Caenorhabditis elegans Set (trithora... 30 0.23
Z75554-1|CAA99953.3| 681|Caenorhabditis elegans Hypothetical pr... 27 1.6
U41993-3|AAA83445.1| 384|Caenorhabditis elegans Nuclear hormone... 27 1.6
U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon gu... 27 2.2
U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon gu... 27 2.2
U58756-9|AAC48086.1| 667|Caenorhabditis elegans Hypothetical pr... 27 2.2
U49829-1|AAA93382.1| 138|Caenorhabditis elegans Hypothetical pr... 27 2.2
U21310-4|AAA62518.1| 165|Caenorhabditis elegans Hypothetical pr... 27 2.2
AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein. 27 2.2
U23515-7|AAK93859.3| 868|Caenorhabditis elegans Larp (rna bindi... 26 3.8
U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna bindi... 26 3.8
AF164625-1|AAD47816.1| 944|Caenorhabditis elegans tandem-array-... 26 5.0
AF043693-2|AAB97535.2| 351|Caenorhabditis elegans Hypothetical ... 26 5.0
AF039720-6|AAB96700.1| 347|Caenorhabditis elegans Hypothetical ... 26 5.0
AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array ... 26 5.0
X91803-1|CAA62913.1| 880|Caenorhabditis elegans sodium-calcium ... 25 6.6
AL132858-13|CAB60477.1| 880|Caenorhabditis elegans Hypothetical... 25 6.6
AC024825-1|ABA00169.1| 1908|Caenorhabditis elegans Plexin protei... 25 6.6
AC006693-3|AAF60377.1| 455|Caenorhabditis elegans Skn related p... 25 6.6
AC006680-2|AAK72302.1| 309|Caenorhabditis elegans Serpentine re... 25 6.6
AB080022-1|BAB85224.1| 1951|Caenorhabditis elegans plexin A prot... 25 6.6
Z70286-4|CAA94291.2| 533|Caenorhabditis elegans Hypothetical pr... 25 8.7
AJ582070-1|CAE46540.1| 533|Caenorhabditis elegans flavin monoox... 25 8.7
AF016687-8|AAK72065.1| 737|Caenorhabditis elegans Hypothetical ... 25 8.7
AF016687-7|AAK72063.1| 881|Caenorhabditis elegans Hypothetical ... 25 8.7
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 158 bits (383), Expect = 7e-40
Identities = 71/91 (78%), Positives = 79/91 (86%)
Frame = +1
Query: 10 SSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDA 189
S +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK L+EALD+
Sbjct: 141 SGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDS 200
Query: 190 ILPSARPTDKALRLPLQDVYKIGGIGTVPVG 282
I+P RPTD+ LRLPLQDVYKIGGIGTVPVG
Sbjct: 201 IIPPQRPTDRPLRLPLQDVYKIGGIGTVPVG 231
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 158 bits (383), Expect = 7e-40
Identities = 71/91 (78%), Positives = 79/91 (86%)
Frame = +1
Query: 10 SSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDA 189
S +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK L+EALD+
Sbjct: 175 SGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDS 234
Query: 190 ILPSARPTDKALRLPLQDVYKIGGIGTVPVG 282
I+P RPTD+ LRLPLQDVYKIGGIGTVPVG
Sbjct: 235 IIPPQRPTDRPLRLPLQDVYKIGGIGTVPVG 265
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 158 bits (383), Expect = 7e-40
Identities = 71/91 (78%), Positives = 79/91 (86%)
Frame = +1
Query: 10 SSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDA 189
S +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK L+EALD+
Sbjct: 175 SGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDS 234
Query: 190 ILPSARPTDKALRLPLQDVYKIGGIGTVPVG 282
I+P RPTD+ LRLPLQDVYKIGGIGTVPVG
Sbjct: 235 IIPPQRPTDRPLRLPLQDVYKIGGIGTVPVG 265
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 52.0 bits (119), Expect = 7e-08
Identities = 30/64 (46%), Positives = 34/64 (53%)
Frame = +2
Query: 77 TEITCWSRPPKCHGSRDGWLSVKKERLKVNALLRPSTPSFRLLAPLTRLSVFPCKTYTKS 256
TE TC P CHGSRDG L+ +KE L R TPS A LT SVF + T+S
Sbjct: 180 TETTCLRSPRTCHGSRDGLLNARKETLPERPSSRLLTPSSHHNAQLTDHSVFHSRMCTRS 239
Query: 257 AVLE 268
LE
Sbjct: 240 EELE 243
Score = 25.8 bits (54), Expect = 5.0
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -1
Query: 242 SCRGRRRALSVGRADGRMASRASIRHL-PSAFPSLRSTNHPLNHGILVDGSNMLSPCQPE 66
+C G R L R + + R S R L PS+ + + T+H + H + S L P Q +
Sbjct: 190 TCHGSRDGLLNARKE-TLPERPSSRLLTPSSHHNAQLTDHSVFHSRMCTRSEELEPSQSD 248
Query: 65 M 63
+
Sbjct: 249 V 249
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 39.5 bits (88), Expect = 4e-04
Identities = 20/67 (29%), Positives = 38/67 (56%)
Frame = +1
Query: 55 FVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPSARPTDKALRLP 234
FVP+SG+ G+N+++ ++ W+ +G CL+E +D+ + P+D LR+
Sbjct: 350 FVPVSGFTGENLIK-RMELDWY------------DGPCLLELIDSFVAPQPPSDGPLRIG 396
Query: 235 LQDVYKI 255
+ DV K+
Sbjct: 397 ISDVLKV 403
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 39.5 bits (88), Expect = 4e-04
Identities = 20/67 (29%), Positives = 38/67 (56%)
Frame = +1
Query: 55 FVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPSARPTDKALRLP 234
FVP+SG+ G+N+++ ++ W+ +G CL+E +D+ + P+D LR+
Sbjct: 368 FVPVSGFTGENLIK-RMELDWY------------DGPCLLELIDSFVAPQPPSDGPLRIG 414
Query: 235 LQDVYKI 255
+ DV K+
Sbjct: 415 ISDVLKV 421
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 31.5 bits (68), Expect = 0.10
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +1
Query: 16 YIKKIGYNPAA-VAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAI 192
+++K+G+NP + +VP SG G + + T W G C IE +D +
Sbjct: 279 FLRKLGFNPKTDITYVPCSGLTGAFIKDRPTGSEG--NWY--------SGPCFIEFIDVL 328
Query: 193 LPS-ARPTDKALRLPLQDVYKIGGIGTVPVG 282
LPS R + +R + + Y +GTV +G
Sbjct: 329 LPSYKRDFNGPVRCTVAEKY--SEMGTVIIG 357
>AC024859-2|AAK29971.2| 502|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 27
protein.
Length = 502
Score = 30.3 bits (65), Expect = 0.23
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
Frame = -3
Query: 273 YCSNTADFVYVLQGKTESLV-SGASRRKDGVEGLNKAFTFSLSFFTLN-QPSLEPWHFGG 100
Y + + F Y L ++ + A RRKD + +++ F N P L W G
Sbjct: 207 YRTISRQFCYFLLAIAKNKIYEAAQRRKDARNAMETPIFYNVPFNVANFTPKLYFWAVGV 266
Query: 99 RLQHVISVPARNGYESDGSRIV 34
V VP+ N DG+ ++
Sbjct: 267 VTTRVNMVPSENQVGEDGNPVI 288
>Z75554-1|CAA99953.3| 681|Caenorhabditis elegans Hypothetical
protein ZC455.1 protein.
Length = 681
Score = 27.5 bits (58), Expect = 1.6
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 92 WSRPP-KCHGSRDGWLSVKKERLKVNALLRPSTPSFRLLAPLTRLSV 229
WS P K GS+D W + R +N+ R S + R + +RLSV
Sbjct: 6 WSATPIKMVGSQDSWGTPPHYRSSLNSNYRDSPANSRNTSARSRLSV 52
>U41993-3|AAA83445.1| 384|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 39 protein.
Length = 384
Score = 27.5 bits (58), Expect = 1.6
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = -3
Query: 270 CSNTADFVYVLQGKTESLVSGASRRKDGVEGLNKAFTFSLSFFTLNQPSL 121
CS T DF+ ++ ++ S + D V ++ ++ +++F+TL+ PSL
Sbjct: 80 CSTTNDFIINIEHSSDKKFSRLLQ--DLVSRDSRTYSKAINFYTLDDPSL 127
>U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform b protein.
Length = 1273
Score = 27.1 bits (57), Expect = 2.2
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = -1
Query: 284 LPTGTVPI-PPILYTSCRGRRRALSVGRADGRMASRASIRHLPSAFPSLRSTNHP 123
+PT VP PP Y RR+ S +DGR + H S S RS + P
Sbjct: 1036 MPTNPVPPEPPARYADHTAGRRSRSSRASDGRGTLNGGLHHRTSG--SQRSDSPP 1088
>U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform a protein.
Length = 1269
Score = 27.1 bits (57), Expect = 2.2
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = -1
Query: 284 LPTGTVPI-PPILYTSCRGRRRALSVGRADGRMASRASIRHLPSAFPSLRSTNHP 123
+PT VP PP Y RR+ S +DGR + H S S RS + P
Sbjct: 1036 MPTNPVPPEPPARYADHTAGRRSRSSRASDGRGTLNGGLHHRTSG--SQRSDSPP 1088
>U58756-9|AAC48086.1| 667|Caenorhabditis elegans Hypothetical
protein F58F9.7 protein.
Length = 667
Score = 27.1 bits (57), Expect = 2.2
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 29 LVTIRLPSLSYPFLAGTEITCWSRPPKC-HGSRDGWLSVKKERLKVNALL 175
++ +R P ++ L G I P C G +GW+ K R ++ALL
Sbjct: 206 VIQVRCPR-TFQTLPGITIGDMGSKPGCWQGVENGWMEFKNHRAPLSALL 254
>U49829-1|AAA93382.1| 138|Caenorhabditis elegans Hypothetical
protein F27D9.3 protein.
Length = 138
Score = 27.1 bits (57), Expect = 2.2
Identities = 15/36 (41%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +1
Query: 136 ERKEGKAEGKCLIEALDAILPSARPTDKA-LRLPLQ 240
E+K+GK + +C+ EA DA+ RP+D+ LR+ L+
Sbjct: 91 EKKQGK-KNECVREADDAVDARPRPSDRGRLRVLLE 125
>U21310-4|AAA62518.1| 165|Caenorhabditis elegans Hypothetical
protein F40H6.1 protein.
Length = 165
Score = 27.1 bits (57), Expect = 2.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 262 YRRFCIRLAGEDGEPCQWGEQTEG 191
YR+ +R+AG+D E WG T G
Sbjct: 32 YRKKLVRVAGDDDEYDHWGVTTFG 55
>AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein.
Length = 1273
Score = 27.1 bits (57), Expect = 2.2
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = -1
Query: 284 LPTGTVPI-PPILYTSCRGRRRALSVGRADGRMASRASIRHLPSAFPSLRSTNHP 123
+PT VP PP Y RR+ S +DGR + H S S RS + P
Sbjct: 1036 MPTNPVPPEPPARYADHTAGRRSRSSRASDGRGTLNGGLHHRTSG--SQRSDSPP 1088
>U23515-7|AAK93859.3| 868|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform a protein.
Length = 868
Score = 26.2 bits (55), Expect = 3.8
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = -1
Query: 284 LPTGTVPIPPILYTSCRGRRRALSVGRADGRMASRASIRHLPSAFPSLRSTNHPLN 117
LP+GT P P ++T R A SV M R S + F + PL+
Sbjct: 585 LPSGTQPTPDSVWTKKAKERAAASVTVPKSPMQRRESEEQKMNRFYPISKPTAPLD 640
>U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform b protein.
Length = 1065
Score = 26.2 bits (55), Expect = 3.8
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = -1
Query: 284 LPTGTVPIPPILYTSCRGRRRALSVGRADGRMASRASIRHLPSAFPSLRSTNHPLN 117
LP+GT P P ++T R A SV M R S + F + PL+
Sbjct: 782 LPSGTQPTPDSVWTKKAKERAAASVTVPKSPMQRRESEEQKMNRFYPISKPTAPLD 837
>AF164625-1|AAD47816.1| 944|Caenorhabditis elegans
tandem-array-modifier protein protein.
Length = 944
Score = 25.8 bits (54), Expect = 5.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 183 RRHPSVCSPH*QGSPSSPARRIQNRR 260
+RHP+ QG P P +RIQN +
Sbjct: 542 QRHPNEGQQFQQGPPPPPPQRIQNHQ 567
>AF043693-2|AAB97535.2| 351|Caenorhabditis elegans Hypothetical
protein C34B2.3 protein.
Length = 351
Score = 25.8 bits (54), Expect = 5.0
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 141 TLNQPSLEPWHFGGRLQHV 85
TL PS PW + G L+H+
Sbjct: 206 TLKPPSAHPWKYVGSLRHM 224
>AF039720-6|AAB96700.1| 347|Caenorhabditis elegans Hypothetical
protein F33D11.7 protein.
Length = 347
Score = 25.8 bits (54), Expect = 5.0
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 141 TLNQPSLEPWHFGGRLQHV 85
TL PS PW + G L+H+
Sbjct: 205 TLKPPSAHPWKYVGSLRHM 223
>AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array
expression modifierprotein 1 protein.
Length = 944
Score = 25.8 bits (54), Expect = 5.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 183 RRHPSVCSPH*QGSPSSPARRIQNRR 260
+RHP+ QG P P +RIQN +
Sbjct: 542 QRHPNEGQQFQQGPPPPPPQRIQNHQ 567
>X91803-1|CAA62913.1| 880|Caenorhabditis elegans sodium-calcium
exchanger protein.
Length = 880
Score = 25.4 bits (53), Expect = 6.6
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2
Query: 271 LFQYRRFCIRLAGEDGEPCQW 209
L QYRRF ++ GE G P W
Sbjct: 830 LLQYRRFNRKVNGELGGPMGW 850
>AL132858-13|CAB60477.1| 880|Caenorhabditis elegans Hypothetical
protein Y113G7A.4a protein.
Length = 880
Score = 25.4 bits (53), Expect = 6.6
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2
Query: 271 LFQYRRFCIRLAGEDGEPCQW 209
L QYRRF ++ GE G P W
Sbjct: 830 LLQYRRFNRKVNGELGGPMGW 850
>AC024825-1|ABA00169.1| 1908|Caenorhabditis elegans Plexin protein 1
protein.
Length = 1908
Score = 25.4 bits (53), Expect = 6.6
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -3
Query: 210 GASRRKDGVEGLNKAFTFSLSFFTLNQPSLEPWHFGGRLQHV-ISVPAR 67
G K +E A ++ T N+P L FGG +HV I P++
Sbjct: 440 GGQLHKILIESKRSAEKYATEMLTDNEPILSDMEFGGDGKHVYILTPSK 488
>AC006693-3|AAF60377.1| 455|Caenorhabditis elegans Skn related
protein 1 protein.
Length = 455
Score = 25.4 bits (53), Expect = 6.6
Identities = 14/57 (24%), Positives = 23/57 (40%)
Frame = -1
Query: 212 VGRADGRMASRASIRHLPSAFPSLRSTNHPLNHGILVDGSNMLSPCQPEMGTKATAA 42
+G + + + S + A+ S+ T PLN G + G + PE T A
Sbjct: 211 IGMQNDSLQAVVSNEQIDYAYQSIGQTQTPLNIGSTIGGGPQQTQMSPESVTVTATA 267
>AC006680-2|AAK72302.1| 309|Caenorhabditis elegans Serpentine
receptor, class x protein9 protein.
Length = 309
Score = 25.4 bits (53), Expect = 6.6
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +1
Query: 25 KIGYNPAAVAFVPISGWHGDNMLEPS 102
K+G F+ +SGW +N+L+P+
Sbjct: 78 KVGRLSVFFGFIFLSGWFMENLLQPT 103
>AB080022-1|BAB85224.1| 1951|Caenorhabditis elegans plexin A
protein.
Length = 1951
Score = 25.4 bits (53), Expect = 6.6
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -3
Query: 210 GASRRKDGVEGLNKAFTFSLSFFTLNQPSLEPWHFGGRLQHV-ISVPAR 67
G K +E A ++ T N+P L FGG +HV I P++
Sbjct: 446 GGQLHKILIESKRSAEKYATEMLTDNEPILSDMEFGGDGKHVYILTPSK 494
>Z70286-4|CAA94291.2| 533|Caenorhabditis elegans Hypothetical
protein K08C7.2 protein.
Length = 533
Score = 25.0 bits (52), Expect = 8.7
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 5/34 (14%)
Frame = +2
Query: 14 PTSRKLVTIR-----LPSLSYPFLAGTEITCWSR 100
P ++KL+ + LPSL + L G ++TC+ R
Sbjct: 3 PNNKKLLIVGAGASGLPSLRHALLYGIDVTCFER 36
>AJ582070-1|CAE46540.1| 533|Caenorhabditis elegans flavin
monooxygenase protein.
Length = 533
Score = 25.0 bits (52), Expect = 8.7
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 5/34 (14%)
Frame = +2
Query: 14 PTSRKLVTIR-----LPSLSYPFLAGTEITCWSR 100
P ++KL+ + LPSL + L G ++TC+ R
Sbjct: 3 PNNKKLLIVGAGASGLPSLRHALLYGIDVTCFER 36
>AF016687-8|AAK72065.1| 737|Caenorhabditis elegans Hypothetical
protein T21D12.9c protein.
Length = 737
Score = 25.0 bits (52), Expect = 8.7
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = +2
Query: 29 LVTIRLPSLSYPFLAGTEITCWSRPPKCHGSRDGWLSVKKERLKVNALLRPSTPSFRLLA 208
L ++ + LSY + I+ WS PK WLS+ R++ PS SFR+L
Sbjct: 290 LTSLEVLDLSYNQIQSFHISSWSHTPKLK-----WLSLHSNRIQ----SLPS-GSFRVLR 339
Query: 209 PLTRL 223
L L
Sbjct: 340 QLEEL 344
>AF016687-7|AAK72063.1| 881|Caenorhabditis elegans Hypothetical
protein T21D12.9a protein.
Length = 881
Score = 25.0 bits (52), Expect = 8.7
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = +2
Query: 29 LVTIRLPSLSYPFLAGTEITCWSRPPKCHGSRDGWLSVKKERLKVNALLRPSTPSFRLLA 208
L ++ + LSY + I+ WS PK WLS+ R++ PS SFR+L
Sbjct: 290 LTSLEVLDLSYNQIQSFHISSWSHTPKLK-----WLSLHSNRIQ----SLPS-GSFRVLR 339
Query: 209 PLTRL 223
L L
Sbjct: 340 QLEEL 344
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.139 0.438
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,657,254
Number of Sequences: 27780
Number of extensions: 154459
Number of successful extensions: 493
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 491
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 270584450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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