Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_F12
         (184 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   0.21 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   0.21 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   0.28 
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    20   2.0  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    20   2.6  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    19   3.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    19   4.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    19   6.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    19   6.1  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    18   8.1  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    18   8.1  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    18   8.1  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    18   8.1  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    18   8.1  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 0.21
 Identities = 7/21 (33%), Positives = 16/21 (76%)
 Frame = +2

Query: 83  KRPMSAYMLWLNSAREQIKSE 145
           K+P++A+ML++   R ++ +E
Sbjct: 480 KKPLNAFMLYMKEMRAKVVAE 500


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 0.21
 Identities = 7/21 (33%), Positives = 16/21 (76%)
 Frame = +2

Query: 83  KRPMSAYMLWLNSAREQIKSE 145
           K+P++A+ML++   R ++ +E
Sbjct: 372 KKPLNAFMLYMKEMRAKVVAE 392


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.0 bits (47), Expect = 0.28
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -1

Query: 88  PLRLVRHFIFF-PDGKNFEIIFELVHNHL 5
           P R +  +I   P G NFEI FE  +N L
Sbjct: 307 PFRALTFWIIVAPAGSNFEIGFENYYNIL 335


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +2

Query: 50  IRKKNKMTDKPK 85
           ++K+NKMT +PK
Sbjct: 142 LKKENKMTWEPK 153


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 4/10 (40%), Positives = 8/10 (80%)
 Frame = -2

Query: 30  FLNWCTTTSC 1
           +++WC+T  C
Sbjct: 99  YVDWCSTNPC 108


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 17  HQFKNNFKIFAIRKKNKMT 73
           H+F+  F I +I +  K+T
Sbjct: 103 HRFRLKFNISSIPRHEKLT 121


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 108 CGSTVPENRSSLNIL 152
           CG  VPE  S+ N++
Sbjct: 703 CGDHVPEINSNPNLV 717


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 132 CSLALLSHSI*ADIGRFGLSVILFFFL 52
           C L   + S  +D  RFG S + + +L
Sbjct: 402 CELFQATLSSSSDTNRFGTSGLAWLYL 428


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 180 FLAISVTFSPGCSDLICS 127
           F  +S+TF+     L+CS
Sbjct: 59  FYCVSITFNVHLLFLLCS 76


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 43  FCHQEKK*NDGQAE 84
           FC+ EK  +DG  E
Sbjct: 135 FCNGEKDCSDGSDE 148


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = -2

Query: 138 LICSLALLSHSI*ADIG-RFGLSVILFFFLMAKILKLFLNWCTTTS 4
           LI S+ALL  ++  D G +  L V +   L    L L      TTS
Sbjct: 224 LISSMALLGFTLPPDSGEKLTLGVTILLSLTV-FLNLVAEKIPTTS 268


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = -2

Query: 138 LICSLALLSHSI*ADIG-RFGLSVILFFFLMAKILKLFLNWCTTTS 4
           LI S+ALL  ++  D G +  L V +   L    L L      TTS
Sbjct: 224 LISSMALLGFTLPPDSGEKLTLGVTILLSLTV-FLNLVAEKIPTTS 268


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -1

Query: 46  KNFEIIFELVHNHLV 2
           KNF    E++HN ++
Sbjct: 214 KNFLSQVEIIHNEIL 228


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory
          receptor candidate 25 protein.
          Length = 314

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -1

Query: 46 KNFEIIFELVHNHLV 2
          KNF    E++HN ++
Sbjct: 39 KNFLSQVEIIHNEIL 53


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,962
Number of Sequences: 336
Number of extensions: 872
Number of successful extensions: 23
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 40
effective length of database: 109,145
effective search space used:  2182900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)