Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_F10
         (352 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    23   0.91 
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   1.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   1.6  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   3.7  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   3.7  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   3.7  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           20   6.4  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    20   8.5  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    20   8.5  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    20   8.5  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    20   8.5  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    20   8.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    20   8.5  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            20   8.5  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    20   8.5  

>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 23.0 bits (47), Expect = 0.91
 Identities = 9/20 (45%), Positives = 11/20 (55%), Gaps = 2/20 (10%)
 Frame = +3

Query: 108 HLPLVR--WWHRFWFHFSPH 161
           HL + R  WWH     F+PH
Sbjct: 87  HLMIHRPNWWHELETKFNPH 106


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +1

Query: 16  ARGAIGKEIVDLVLDRIRKLADQCTG 93
           A+G  G  IVD+ LD  R L   CTG
Sbjct: 396 AKGLGGIAIVDITLDDFRGL---CTG 418


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 349  SYVGRCHRWLHC 314
            +Y G C R+LHC
Sbjct: 1286 AYPGDCTRYLHC 1297



 Score = 20.6 bits (41), Expect = 4.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 70   CGCGRGPSLR 41
            CGCG+ P L+
Sbjct: 2672 CGCGKHPLLK 2681


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 196 YTSCRSQRRVAP*GEK*NQN 137
           Y+S  SQ +VAP GE  N +
Sbjct: 484 YSSESSQNQVAPTGENSNSS 503


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 84  MHRPPGIP 107
           MHRPPG P
Sbjct: 431 MHRPPGDP 438


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 196 YTSCRSQRRVAP*GEK*NQN 137
           Y+S  SQ +VAP GE  N +
Sbjct: 432 YSSESSQNQVAPTGENSNSS 451


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +1

Query: 268 TTHTTLEHSDCAFMVDNEAIYDICR 342
           T H    +++    V  E IY+ CR
Sbjct: 35  TEHNYTHNNEMYHSVKEEPIYESCR 59



 Score = 19.8 bits (39), Expect = 8.5
 Identities = 7/20 (35%), Positives = 9/20 (45%)
 Frame = -3

Query: 101 PWRPVHWSASLRMRSRTKST 42
           PW   H  +S     RT+ T
Sbjct: 170 PWMKAHGDSSATGNKRTRQT 189


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 7/20 (35%), Positives = 9/20 (45%)
 Frame = -3

Query: 101 PWRPVHWSASLRMRSRTKST 42
           PW   H  +S     RT+ T
Sbjct: 170 PWMKAHGDSSATGNKRTRQT 189


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 5/18 (27%), Positives = 11/18 (61%)
 Frame = +1

Query: 295 DCAFMVDNEAIYDICRRN 348
           DC  +     ++++CR+N
Sbjct: 71  DCYMLFREPQLHNLCRKN 88


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 5/18 (27%), Positives = 11/18 (61%)
 Frame = +1

Query: 295 DCAFMVDNEAIYDICRRN 348
           DC  +     ++++CR+N
Sbjct: 71  DCYMLFREPQLHNLCRKN 88


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 317 MKPSMTSADVTW 352
           +KPS    DVTW
Sbjct: 127 IKPSKPKYDVTW 138


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 7/20 (35%), Positives = 9/20 (45%)
 Frame = -3

Query: 101 PWRPVHWSASLRMRSRTKST 42
           PW   H  +S     RT+ T
Sbjct: 170 PWMKAHGDSSATGNKRTRQT 189


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +3

Query: 81  PMHRPPG 101
           PMH PPG
Sbjct: 196 PMHSPPG 202


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 9/28 (32%), Positives = 11/28 (39%)
 Frame = +3

Query: 27  HWKGNRRLGPRPHPQTR*PMHRPPGIPH 110
           H  G+   G    PQ   P   P  +PH
Sbjct: 76  HLSGDMTHGASISPQNTPPAGYPMDVPH 103


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 9/28 (32%), Positives = 11/28 (39%)
 Frame = +3

Query: 27  HWKGNRRLGPRPHPQTR*PMHRPPGIPH 110
           H  G+   G    PQ   P   P  +PH
Sbjct: 76  HLSGDMTHGASISPQNTPPAGYPMDVPH 103


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,922
Number of Sequences: 336
Number of extensions: 1766
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6981810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)