BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_F10
(352 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 161 1e-40
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 160 2e-40
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 160 2e-40
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 133 3e-32
03_01_0034 + 318432-318825,318902-319851 96 6e-21
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 96 8e-21
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 96 8e-21
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 96 8e-21
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 96 8e-21
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 96 8e-21
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 79 7e-16
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 75 1e-14
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 64 2e-11
12_01_0468 + 3661177-3661626 29 0.78
01_06_0638 - 30768546-30768779,30768908-30769017,30769301-307694... 28 2.4
12_01_0269 + 1965126-1965169,1965398-1966064,1966181-1966693 27 4.1
05_01_0162 - 1095020-1095202,1096114-1096188,1096939-1097039,109... 27 4.1
09_01_0060 - 942762-943448,943840-943867,944044-944077,944383-94... 27 5.5
03_05_0204 - 21961332-21961715,21962030-21962374 27 5.5
03_01_0650 - 4762354-4763247 27 5.5
02_05_0490 + 29456825-29457499,29458771-29459057,29460922-294610... 27 5.5
02_03_0147 - 15738479-15738650,15739015-15739256 27 5.5
08_02_1406 - 26854845-26855606 26 7.2
01_07_0180 + 41832357-41832680,41833024-41833367,41833789-418339... 26 7.2
11_06_0648 + 25873779-25874279,25874418-25875548 26 9.6
04_03_0868 - 20420298-20420915 26 9.6
02_01_0251 - 1652356-1652522,1652564-1652608,1652658-1652733,165... 26 9.6
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 161 bits (391), Expect = 1e-40
Identities = 77/114 (67%), Positives = 90/114 (78%), Gaps = 2/114 (1%)
Frame = +1
Query: 16 ARG--AIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGK 189
ARG +GKEIVDL LDR+RKLAD CTGLQGFL+F+ LL+ERLSVDYGK
Sbjct: 104 ARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGK 163
Query: 190 KCKLECGIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
K KL IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+L
Sbjct: 164 KSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSL 217
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 160 bits (389), Expect = 2e-40
Identities = 77/114 (67%), Positives = 90/114 (78%), Gaps = 2/114 (1%)
Frame = +1
Query: 16 ARG--AIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGK 189
ARG IGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL+ERLSVDYGK
Sbjct: 104 ARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGK 163
Query: 190 KCKLECGIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
K KL +YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+L
Sbjct: 164 KSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSL 217
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 160 bits (389), Expect = 2e-40
Identities = 77/114 (67%), Positives = 90/114 (78%), Gaps = 2/114 (1%)
Frame = +1
Query: 16 ARG--AIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGK 189
ARG IGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL+ERLSVDYGK
Sbjct: 104 ARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGK 163
Query: 190 KCKLECGIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
K KL +YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+L
Sbjct: 164 KSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSL 217
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 133 bits (322), Expect = 3e-32
Identities = 70/135 (51%), Positives = 89/135 (65%), Gaps = 23/135 (17%)
Frame = +1
Query: 16 ARG--AIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGK 189
ARG +G+E+VDL LDR+RKLAD CTGLQGFL+F+ LL+ERLSVDYG+
Sbjct: 164 ARGHYTVGREVVDLCLDRLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGR 223
Query: 190 KCKLECGIYPAPQ---------------------VSTAVVEPYNSILTTHTTLEHSDCAF 306
K KL IYP+PQ +STAVVEPYNS+L+TH+ +EH+D
Sbjct: 224 KSKLGFTIYPSPQYFFMSSSCMHIMSDTQISQCKISTAVVEPYNSVLSTHSLIEHTDVVV 283
Query: 307 MVDNEAIYDICRRNL 351
++DNEAIYDIC+R+L
Sbjct: 284 LLDNEAIYDICKRSL 298
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 96.3 bits (229), Expect = 6e-21
Identities = 43/107 (40%), Positives = 65/107 (60%)
Frame = +1
Query: 31 GKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKCKLECG 210
G E++D VLD +RK A+ C LQGF + H LL+ ++ +Y + L
Sbjct: 109 GAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFS 168
Query: 211 IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L
Sbjct: 169 VFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTL 215
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 95.9 bits (228), Expect = 8e-21
Identities = 43/107 (40%), Positives = 65/107 (60%)
Frame = +1
Query: 31 GKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKCKLECG 210
G E++D VLD +RK A+ C LQGF + H LL+ ++ +Y + L
Sbjct: 109 GAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFS 168
Query: 211 IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L
Sbjct: 169 VFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTL 215
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 95.9 bits (228), Expect = 8e-21
Identities = 43/107 (40%), Positives = 65/107 (60%)
Frame = +1
Query: 31 GKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKCKLECG 210
G E++D VLD +RK A+ C LQGF + H LL+ ++ +Y + L
Sbjct: 289 GAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFS 348
Query: 211 IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L
Sbjct: 349 VFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTL 395
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 95.9 bits (228), Expect = 8e-21
Identities = 43/107 (40%), Positives = 65/107 (60%)
Frame = +1
Query: 31 GKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKCKLECG 210
G E++D VLD +RK A+ C LQGF + H LL+ ++ +Y + L
Sbjct: 109 GAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFS 168
Query: 211 IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L
Sbjct: 169 VFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTL 215
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 95.9 bits (228), Expect = 8e-21
Identities = 43/107 (40%), Positives = 65/107 (60%)
Frame = +1
Query: 31 GKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKCKLECG 210
G E++D VLD +RK A+ C LQGF + H LL+ ++ +Y + L
Sbjct: 109 GAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFS 168
Query: 211 IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L
Sbjct: 169 VFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTL 215
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 95.9 bits (228), Expect = 8e-21
Identities = 43/107 (40%), Positives = 65/107 (60%)
Frame = +1
Query: 31 GKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKCKLECG 210
G E++D VLD +RK A+ C LQGF + H LL+ ++ +Y + L
Sbjct: 109 GAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFS 168
Query: 211 IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L
Sbjct: 169 VFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTL 215
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 79.4 bits (187), Expect = 7e-16
Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 16/123 (13%)
Frame = +1
Query: 31 GKEIVDLVLDRIRKLADQCTGLQ----------------GFLIFHXXXXXXXXXXXXLLM 162
G E++D VLD +RK A+ C LQ GF + H LL+
Sbjct: 109 GAELIDSVLDVVRKEAENCDCLQDNRVIRQLGSIDNEQSGFQVCHSLGGGTGSGMGTLLI 168
Query: 163 ERLSVDYGKKCKLECGIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICR 342
++ +Y + L ++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC
Sbjct: 169 SKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICF 228
Query: 343 RNL 351
R L
Sbjct: 229 RTL 231
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 75.4 bits (177), Expect = 1e-14
Identities = 43/128 (33%), Positives = 65/128 (50%), Gaps = 21/128 (16%)
Frame = +1
Query: 31 GKEIVDLVLDRIRKLADQCTGLQG---------------------FLIFHXXXXXXXXXX 147
G E++D VLD +RK A+ C LQG F + H
Sbjct: 109 GAELIDSVLDVVRKEAENCDCLQGCRRLLEVHPLTCCESRNMMHGFQVCHSLGGGTGSGM 168
Query: 148 XXLLMERLSVDYGKKCKLECGIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 327
LL+ ++ +Y + L ++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+
Sbjct: 169 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 228
Query: 328 YDICRRNL 351
YDIC R L
Sbjct: 229 YDICFRTL 236
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 64.5 bits (150), Expect = 2e-11
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Frame = +1
Query: 31 GKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKCKLECG 210
G+++VD ++D I + AD L+GF++ H L+E L+ Y KK
Sbjct: 111 GEQVVDDIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYS 170
Query: 211 IYP-APQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
++P + S VV+PYNS+LT ++DC ++DN A+ I L
Sbjct: 171 VFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERL 218
>12_01_0468 + 3661177-3661626
Length = 149
Score = 29.5 bits (63), Expect = 0.78
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 171 ESLHEERSETRTGATTERVEDEESLEACALVSEFADAVEDQ 49
E LH + E E VE+EE +E +V E + +E++
Sbjct: 56 EQLHSDEEEEEEEEEEEEVEEEEDIEEEEVVEEEEEEIEEE 96
>01_06_0638 -
30768546-30768779,30768908-30769017,30769301-30769490,
30769842-30769914,30770007-30770063,30770147-30770211,
30770278-30770488,30770568-30770650,30771123-30771158,
30771611-30771713,30771813-30771899,30772210-30772403
Length = 480
Score = 27.9 bits (59), Expect = 2.4
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 99 LEACALVSEFADAVEDQVYDFLS 31
+ A AL+ E D VED + DFLS
Sbjct: 103 IHALALLDEIPDDVEDDIVDFLS 125
>12_01_0269 + 1965126-1965169,1965398-1966064,1966181-1966693
Length = 407
Score = 27.1 bits (57), Expect = 4.1
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = +3
Query: 54 PRPHPQTR*PMHRPPGIPHLPLVRWWHRFWFHFSPHGATLR 176
P P P P PP P P R HR W F+PHG R
Sbjct: 330 PSPSPPFPSPPSPPPP-PTSPSPRQ-HRGWAIFAPHGGHAR 368
>05_01_0162 -
1095020-1095202,1096114-1096188,1096939-1097039,
1097467-1097577,1097704-1097807,1098260-1098493,
1098583-1099304
Length = 509
Score = 27.1 bits (57), Expect = 4.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 54 PRPHPQTR*PMHRPPGIPHLP 116
PRPHP R H PP P P
Sbjct: 129 PRPHPDIRILAHAPPPAPPPP 149
>09_01_0060 -
942762-943448,943840-943867,944044-944077,944383-944437
Length = 267
Score = 26.6 bits (56), Expect = 5.5
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -1
Query: 136 RCHHRTSGR*GIPGGLCIGQRVCGCGRG 53
RCH RT R G G GQRV G G
Sbjct: 87 RCHRRTRWRAGGEGSSGGGQRVSSFGSG 114
>03_05_0204 - 21961332-21961715,21962030-21962374
Length = 242
Score = 26.6 bits (56), Expect = 5.5
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 93 PPGIPHLPLVRWWHRFWFHFSPHGA 167
PP +P P R RFW HF H A
Sbjct: 81 PPLLPADPYHRAMARFWAHFIDHKA 105
>03_01_0650 - 4762354-4763247
Length = 297
Score = 26.6 bits (56), Expect = 5.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 249 LYNSSGHLGCGIDTALQFTLLAVVNGESLHEERSETRTGATT 124
L HLG + A+ L A+ +G L + + +T++ ATT
Sbjct: 170 LRRGGAHLGPPLHAAVDAKLHAICHGMDLPQPQPQTQSNATT 211
>02_05_0490 + 29456825-29457499,29458771-29459057,29460922-29461039,
29461451-29461972,29462058-29462170,29463033-29463053,
29463726-29463960,29464218-29464381,29464695-29464776,
29465077-29465166,29465625-29465858,29466347-29466418,
29466857-29467000,29467573-29467659,29467940-29468098,
29469216-29469476,29469789-29469836
Length = 1103
Score = 26.6 bits (56), Expect = 5.5
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -2
Query: 252 GLYNSSGHLGCGIDTALQFTLLAVVNGESLHEERSETRTGATTERVEDEESLEACA 85
G +NS H+ D +LQF +LAV+ S+ ++ T +T +D S E A
Sbjct: 914 GRFNSK-HITAENDPSLQFAILAVITIASISLQKMMLYTPSTKSSDDDTISDENSA 968
>02_03_0147 - 15738479-15738650,15739015-15739256
Length = 137
Score = 26.6 bits (56), Expect = 5.5
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3
Query: 21 RRHWKGNRRLGPRPHPQTR 77
RR W G RR G R P+TR
Sbjct: 44 RREWCGQRRRGRRSPPRTR 62
>08_02_1406 - 26854845-26855606
Length = 253
Score = 26.2 bits (55), Expect = 7.2
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1
Query: 115 GR*GIPGGLCIGQRVCGCG 59
GR G+P C GQ VCG G
Sbjct: 195 GRDGVPPCCCCGQCVCGGG 213
>01_07_0180 +
41832357-41832680,41833024-41833367,41833789-41833945,
41834119-41834430,41834537-41834908
Length = 502
Score = 26.2 bits (55), Expect = 7.2
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +3
Query: 93 PPGIPHLPLVRWWHRFWFHF 152
PP +P PL R RFW HF
Sbjct: 85 PPLLPADPLRRAMARFWVHF 104
>11_06_0648 + 25873779-25874279,25874418-25875548
Length = 543
Score = 25.8 bits (54), Expect = 9.6
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
Frame = -2
Query: 279 GVGCKDRVVGLYNS-------SGHLGCGIDT-ALQFTLLAVVNGESLHEERSETRTGATT 124
G G ++ ++G Y +G L +D +L +L V+ G+ + + E T
Sbjct: 361 GPGHQENIIGTYGYLAPECVIAGTLNPTVDVYSLGVVMLEVLTGKKPYFSKEEWEKEKTE 420
Query: 123 ERVEDEESLEAC 88
ERVE EE E C
Sbjct: 421 ERVE-EEKREEC 431
>04_03_0868 - 20420298-20420915
Length = 205
Score = 25.8 bits (54), Expect = 9.6
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 42 RRLGPRPHPQTR*PMHRPP 98
+RLGPRP Q+R P H P
Sbjct: 19 QRLGPRPATQSRPPPHLLP 37
>02_01_0251 -
1652356-1652522,1652564-1652608,1652658-1652733,
1652976-1653041,1653120-1653238,1653334-1653508,
1653604-1653881,1654253-1654436,1654455-1654550,
1654872-1655012,1655091-1655123
Length = 459
Score = 25.8 bits (54), Expect = 9.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 123 ERVEDEESLEACALVSEFADAVEDQVY 43
E + +EE+ A + SE +DAVE+ Y
Sbjct: 154 EYIHEEENQSAVPITSEESDAVENYTY 180
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,854,314
Number of Sequences: 37544
Number of extensions: 224610
Number of successful extensions: 736
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 518263348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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