Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_F10
         (352 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    91   1e-20
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    91   1e-20
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    91   1e-20
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    91   1e-20
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   4.4  
AY645023-1|AAT92559.1|   99|Anopheles gambiae wingless protein.        22   5.8  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    22   7.6  

>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 91.1 bits (216), Expect = 1e-20
 Identities = 42/107 (39%), Positives = 62/107 (57%)
 Frame = +1

Query: 31  GKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKCKLECG 210
           G E+VD VLD +RK  + C  LQGF + H            LL+ ++  +Y  +      
Sbjct: 5   GAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYS 64

Query: 211 IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
           + P+P+VS  VVEPYN+ L+ H  +E++D  + +DNEA+YDIC R L
Sbjct: 65  VVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTL 111


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 91.1 bits (216), Expect = 1e-20
 Identities = 42/107 (39%), Positives = 62/107 (57%)
 Frame = +1

Query: 31  GKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKCKLECG 210
           G E+VD VLD +RK  + C  LQGF + H            LL+ ++  +Y  +      
Sbjct: 5   GAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYS 64

Query: 211 IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
           + P+P+VS  VVEPYN+ L+ H  +E++D  + +DNEA+YDIC R L
Sbjct: 65  VVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTL 111


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 91.1 bits (216), Expect = 1e-20
 Identities = 42/107 (39%), Positives = 62/107 (57%)
 Frame = +1

Query: 31  GKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKCKLECG 210
           G E+VD VLD +RK  + C  LQGF + H            LL+ ++  +Y  +      
Sbjct: 5   GAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYS 64

Query: 211 IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
           + P+P+VS  VVEPYN+ L+ H  +E++D  + +DNEA+YDIC R L
Sbjct: 65  VVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTL 111


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 91.1 bits (216), Expect = 1e-20
 Identities = 42/107 (39%), Positives = 62/107 (57%)
 Frame = +1

Query: 31  GKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKCKLECG 210
           G E+VD VLD +RK  + C  LQGF + H            LL+ ++  +Y  +      
Sbjct: 5   GAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYS 64

Query: 211 IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
           + P+P+VS  VVEPYN+ L+ H  +E++D  + +DNEA+YDIC R L
Sbjct: 65  VVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTL 111


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 98  WRPVHWSASLRMRSRTKSTISFPMAPRA 15
           WR V+W  S+    R KS  +  +A RA
Sbjct: 274 WRGVYWWTSVIADLRRKSKAASRVAQRA 301


>AY645023-1|AAT92559.1|   99|Anopheles gambiae wingless protein.
          Length = 99

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 10/19 (52%), Positives = 12/19 (63%), Gaps = 2/19 (10%)
 Frame = +3

Query: 255 QLYPYNPHH--PGTLRLCF 305
           QL PYNP H  PG+  L +
Sbjct: 2   QLKPYNPEHKPPGSKDLVY 20


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +3

Query: 228 GVHCCCR 248
           G HCCCR
Sbjct: 285 GQHCCCR 291


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 403,042
Number of Sequences: 2352
Number of extensions: 7865
Number of successful extensions: 27
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 25364985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)