Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_F10
(352 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 188 1e-48
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 188 1e-48
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 188 1e-48
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 188 1e-48
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 184 2e-47
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 184 2e-47
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 184 2e-47
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 182 8e-47
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 181 1e-46
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 181 1e-46
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 177 2e-45
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 173 3e-44
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 170 2e-43
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 170 2e-43
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 166 4e-42
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 161 2e-40
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 95 1e-20
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 93 4e-20
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 93 5e-20
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 91 2e-19
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 91 3e-19
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 91 3e-19
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 88 2e-18
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 88 2e-18
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 53 7e-08
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 53 7e-08
Z92826-2|CAB07319.1| 266|Caenorhabditis elegans Hypothetical pr... 29 0.71
Z81130-8|CAB03416.1| 347|Caenorhabditis elegans Hypothetical pr... 27 2.9
U41508-2|AAN39665.2| 552|Caenorhabditis elegans Set (trithorax/... 27 2.9
AY455927-3|AAR26304.1| 347|Caenorhabditis elegans phosphoglucos... 27 2.9
AL132951-1|CAC44310.2| 707|Caenorhabditis elegans Hypothetical ... 27 3.8
Z36948-1|CAA85409.1| 180|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z73908-3|CAC42305.1| 184|Caenorhabditis elegans Hypothetical pr... 26 8.7
U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical pr... 26 8.7
U13645-7|AAA20989.2| 598|Caenorhabditis elegans Hypothetical pr... 26 8.7
AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily a... 26 8.7
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 188 bits (457), Expect = 1e-48
Identities = 90/114 (78%), Positives = 94/114 (82%), Gaps = 2/114 (1%)
Frame = +1
Query: 16 ARG--AIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGK 189
ARG IGKEI+DL LDRIR+LAD CTGLQGFL+FH LLMERLSVDYGK
Sbjct: 104 ARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGK 163
Query: 190 KCKLECGIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
K KLE IYPAPQVSTAVVEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNL
Sbjct: 164 KAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNL 217
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 188 bits (457), Expect = 1e-48
Identities = 90/114 (78%), Positives = 94/114 (82%), Gaps = 2/114 (1%)
Frame = +1
Query: 16 ARG--AIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGK 189
ARG IGKEI+DL LDRIR+LAD CTGLQGFL+FH LLMERLSVDYGK
Sbjct: 103 ARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGK 162
Query: 190 KCKLECGIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
K KLE IYPAPQVSTAVVEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNL
Sbjct: 163 KAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNL 216
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 188 bits (457), Expect = 1e-48
Identities = 90/114 (78%), Positives = 94/114 (82%), Gaps = 2/114 (1%)
Frame = +1
Query: 16 ARG--AIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGK 189
ARG IGKEI+DL LDRIR+LAD CTGLQGFL+FH LLMERLSVDYGK
Sbjct: 104 ARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGK 163
Query: 190 KCKLECGIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
K KLE IYPAPQVSTAVVEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNL
Sbjct: 164 KAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNL 217
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 188 bits (457), Expect = 1e-48
Identities = 90/114 (78%), Positives = 94/114 (82%), Gaps = 2/114 (1%)
Frame = +1
Query: 16 ARG--AIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGK 189
ARG IGKEI+DL LDRIR+LAD CTGLQGFL+FH LLMERLSVDYGK
Sbjct: 104 ARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGK 163
Query: 190 KCKLECGIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
K KLE IYPAPQVSTAVVEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNL
Sbjct: 164 KAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNL 217
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 184 bits (447), Expect = 2e-47
Identities = 87/114 (76%), Positives = 93/114 (81%), Gaps = 2/114 (1%)
Frame = +1
Query: 16 ARG--AIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGK 189
ARG +GKE++D VLDRIR+LAD C+GLQGF +FH LLMERLSVDYGK
Sbjct: 102 ARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGK 161
Query: 190 KCKLECGIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
K KLE IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL
Sbjct: 162 KSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 215
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 184 bits (447), Expect = 2e-47
Identities = 87/114 (76%), Positives = 93/114 (81%), Gaps = 2/114 (1%)
Frame = +1
Query: 16 ARG--AIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGK 189
ARG +GKE++D VLDRIR+LAD C+GLQGF +FH LLMERLSVDYGK
Sbjct: 102 ARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGK 161
Query: 190 KCKLECGIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
K KLE IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL
Sbjct: 162 KSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 215
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 184 bits (447), Expect = 2e-47
Identities = 87/114 (76%), Positives = 93/114 (81%), Gaps = 2/114 (1%)
Frame = +1
Query: 16 ARG--AIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGK 189
ARG +GKE++D VLDRIR+LAD C+GLQGF +FH LLMERLSVDYGK
Sbjct: 102 ARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGK 161
Query: 190 KCKLECGIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
K KLE IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL
Sbjct: 162 KSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 215
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 182 bits (442), Expect = 8e-47
Identities = 86/114 (75%), Positives = 92/114 (80%), Gaps = 2/114 (1%)
Frame = +1
Query: 16 ARG--AIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGK 189
ARG +GKE++D VLDRIR+LAD C+GLQGF +FH LLMERLSVDYGK
Sbjct: 102 ARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGK 161
Query: 190 KCKLECGIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
K KLE IYPAPQV TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL
Sbjct: 162 KSKLEFSIYPAPQVCTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 215
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 181 bits (440), Expect = 1e-46
Identities = 85/114 (74%), Positives = 92/114 (80%), Gaps = 2/114 (1%)
Frame = +1
Query: 16 ARG--AIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGK 189
ARG +GKE++D LDRIR+LAD C+GLQGF +FH LLMERLSVDYGK
Sbjct: 102 ARGHYTVGKELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGK 161
Query: 190 KCKLECGIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
K KLE IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC+RNL
Sbjct: 162 KSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNL 215
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 181 bits (440), Expect = 1e-46
Identities = 85/114 (74%), Positives = 92/114 (80%), Gaps = 2/114 (1%)
Frame = +1
Query: 16 ARG--AIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGK 189
ARG +GKE++D LDRIR+LAD C+GLQGF +FH LLMERLSVDYGK
Sbjct: 102 ARGHYTVGKELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGK 161
Query: 190 KCKLECGIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
K KLE IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC+RNL
Sbjct: 162 KSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNL 215
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 177 bits (431), Expect = 2e-45
Identities = 83/114 (72%), Positives = 93/114 (81%), Gaps = 2/114 (1%)
Frame = +1
Query: 16 ARG--AIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGK 189
ARG IGKEI+D+V+DR+R+L + C GLQGFL+FH LLMERLSVDYGK
Sbjct: 109 ARGHYTIGKEIIDVVMDRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGK 168
Query: 190 KCKLECGIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
K KLE IYPAPQVST++VEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNL
Sbjct: 169 KSKLEFCIYPAPQVSTSMVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNL 222
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 173 bits (421), Expect = 3e-44
Identities = 80/114 (70%), Positives = 90/114 (78%), Gaps = 2/114 (1%)
Frame = +1
Query: 16 ARG--AIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGK 189
ARG +GKEI+D LDRIR+LA+ C GLQGF +FH +LMERLS +YGK
Sbjct: 101 ARGHYTVGKEIIDTTLDRIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGK 160
Query: 190 KCKLECGIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
K KLE IYPAPQ+ST+VVEPYNSILTTHTTLEHSDC+FMVDNEAIYDICRRNL
Sbjct: 161 KSKLEFSIYPAPQISTSVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNL 214
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 170 bits (414), Expect = 2e-43
Identities = 77/116 (66%), Positives = 90/116 (77%)
Frame = +1
Query: 4 CGISARGAIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 183
C R IG+E++D+V+DR+++LA+ C GLQGF+IFH LLMERLS +Y
Sbjct: 108 CYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEY 167
Query: 184 GKKCKLECGIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
GKK KLE IYPAPQVST++VEPYNSIL THTTLEHSDC FMVDNEAIYDICRRNL
Sbjct: 168 GKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVDNEAIYDICRRNL 223
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 170 bits (414), Expect = 2e-43
Identities = 77/116 (66%), Positives = 90/116 (77%)
Frame = +1
Query: 4 CGISARGAIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 183
C R IG+E++D+V+DR+++LA+ C GLQGF+IFH LLMERLS +Y
Sbjct: 80 CYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEY 139
Query: 184 GKKCKLECGIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
GKK KLE IYPAPQVST++VEPYNSIL THTTLEHSDC FMVDNEAIYDICRRNL
Sbjct: 140 GKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVDNEAIYDICRRNL 195
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 166 bits (403), Expect = 4e-42
Identities = 78/114 (68%), Positives = 90/114 (78%), Gaps = 2/114 (1%)
Frame = +1
Query: 16 ARG--AIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGK 189
ARG IGKE++D+VLDRIRK + C GLQGFL+FH LLMERLSV++GK
Sbjct: 107 ARGHYTIGKELIDVVLDRIRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGK 166
Query: 190 KCKLECGIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
K KLE +YPAPQVST+VVEPYNSILTTHTTLE SDC+FMVDNEAIYD+CR+ L
Sbjct: 167 KSKLEFSVYPAPQVSTSVVEPYNSILTTHTTLELSDCSFMVDNEAIYDLCRQKL 220
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 161 bits (390), Expect = 2e-40
Identities = 72/114 (63%), Positives = 91/114 (79%), Gaps = 2/114 (1%)
Frame = +1
Query: 16 ARG--AIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGK 189
ARG IGKE++D+V+DR+R+L ++C LQGFLIFH L+MERLS+DYGK
Sbjct: 104 ARGHYTIGKELIDVVMDRVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGK 163
Query: 190 KCKLECGIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
K KLE IYPAPQ+ST++VEPYNS+LTTHTTLEHSDC+F++DNEAIY+I + NL
Sbjct: 164 KAKLEFSIYPAPQISTSMVEPYNSLLTTHTTLEHSDCSFIMDNEAIYEITKVNL 217
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 95.1 bits (226), Expect = 1e-20
Identities = 44/107 (41%), Positives = 64/107 (59%)
Frame = +1
Query: 31 GKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKCKLECG 210
G E+VD VLD +RK A+ C LQGF + H LL+ ++ +Y + +
Sbjct: 109 GAELVDNVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFS 168
Query: 211 IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
+ P+P+VS VVEPYN+ L+ H +E++D F +DNEA+YDIC R L
Sbjct: 169 VVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTL 215
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 93.5 bits (222), Expect = 4e-20
Identities = 44/107 (41%), Positives = 63/107 (58%)
Frame = +1
Query: 31 GKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKCKLECG 210
G E+VD VLD +RK A+ C LQGF + H LL+ ++ +Y +
Sbjct: 109 GAELVDNVLDVVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFS 168
Query: 211 IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
+ P+P+VS VVEPYN+ L+ H +E++D F +DNEA+YDIC R L
Sbjct: 169 VVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTL 215
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 93.1 bits (221), Expect = 5e-20
Identities = 44/107 (41%), Positives = 63/107 (58%)
Frame = +1
Query: 31 GKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKCKLECG 210
G E+VD VLD IRK A+ C LQGF + H LL+ ++ +Y +
Sbjct: 109 GAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFS 168
Query: 211 IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
+ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L
Sbjct: 169 VVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTL 215
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 91.5 bits (217), Expect = 2e-19
Identities = 43/107 (40%), Positives = 63/107 (58%)
Frame = +1
Query: 31 GKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKCKLECG 210
G E+VD VLD IRK A+ C LQGF + H LL+ ++ ++ +
Sbjct: 109 GAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFS 168
Query: 211 IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
+ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L
Sbjct: 169 VVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTL 215
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 90.6 bits (215), Expect = 3e-19
Identities = 43/107 (40%), Positives = 62/107 (57%)
Frame = +1
Query: 31 GKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKCKLECG 210
G E+VD VLD +RK A+ LQGF + H LL+ ++ +Y +
Sbjct: 109 GAELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFS 168
Query: 211 IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
+ P+P+VS VVEPYN+ L+ H +E++D F +DNEA+YDIC R L
Sbjct: 169 VVPSPKVSDTVVEPYNATLSVHQLVENTDSTFCIDNEALYDICFRTL 215
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 90.6 bits (215), Expect = 3e-19
Identities = 43/107 (40%), Positives = 62/107 (57%)
Frame = +1
Query: 31 GKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKCKLECG 210
G E+VD VLD +RK A+ LQGF + H LL+ ++ +Y +
Sbjct: 109 GAELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFS 168
Query: 211 IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
+ P+P+VS VVEPYN+ L+ H +E++D F +DNEA+YDIC R L
Sbjct: 169 VVPSPKVSDTVVEPYNATLSVHQLVENTDSTFCIDNEALYDICFRTL 215
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 87.8 bits (208), Expect = 2e-18
Identities = 44/107 (41%), Positives = 61/107 (57%)
Frame = +1
Query: 31 GKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKCKLECG 210
G EIVD VL IR+ A+ L+GF + H LL+ +L +Y K C
Sbjct: 109 GAEIVDKVLSVIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCS 168
Query: 211 IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
I P+ +VS VVEPYN+IL+ +++ D F +DNEAI+DIC+ NL
Sbjct: 169 IIPSAKVSDTVVEPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNL 215
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 87.8 bits (208), Expect = 2e-18
Identities = 44/107 (41%), Positives = 61/107 (57%)
Frame = +1
Query: 31 GKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKCKLECG 210
G EIVD VL IR+ A+ L+GF + H LL+ +L +Y K C
Sbjct: 109 GAEIVDKVLSVIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCS 168
Query: 211 IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 351
I P+ +VS VVEPYN+IL+ +++ D F +DNEAI+DIC+ NL
Sbjct: 169 IIPSAKVSDTVVEPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNL 215
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 52.8 bits (121), Expect = 7e-08
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Frame = +1
Query: 31 GKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKCKLECG 210
G+E+ + ++D I + A+ L G L H LL+ERL + KK
Sbjct: 113 GQEVQEKIMDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYS 172
Query: 211 IYPAPQVST-AVVEPYNSILTTHTTLEHSDCAFMVDNEAIY 330
++ ST VV PYN +L+ +E+ D ++DN A++
Sbjct: 173 VFANSDTSTDVVVHPYNWVLSMQRLIENPDHVVVLDNAALH 213
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 52.8 bits (121), Expect = 7e-08
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Frame = +1
Query: 31 GKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKCKLECG 210
G+E+ + ++D I + A+ L G L H LL+ERL + KK
Sbjct: 113 GQEVQEKIMDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYS 172
Query: 211 IYPAPQVST-AVVEPYNSILTTHTTLEHSDCAFMVDNEAIY 330
++ ST VV PYN +L+ +E+ D ++DN A++
Sbjct: 173 VFANSDTSTDVVVHPYNWVLSMQRLIENPDHVVVLDNAALH 213
>Z92826-2|CAB07319.1| 266|Caenorhabditis elegans Hypothetical
protein C18D11.2 protein.
Length = 266
Score = 29.5 bits (63), Expect = 0.71
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Frame = -2
Query: 207 ALQFTLLAVVNGESL---HEERSETR-TGATTERVEDEESLEACALV-SEFADAVEDQV 46
A +F +L V+ G+ H +++E + T T+ VE S AC L +E+ADA++D++
Sbjct: 106 APKFEVLGVLEGKDQAVEHPKKTENKETENETDNVETPNS-SACILSDNEYADAIDDEI 163
>Z81130-8|CAB03416.1| 347|Caenorhabditis elegans Hypothetical
protein T23G11.2 protein.
Length = 347
Score = 27.5 bits (58), Expect = 2.9
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = -2
Query: 333 VIDGFIVDHESTIGVFQGGVGCKDRVVGLYNSSGH 229
+++ +V+ TIGV++ + CK ++ YN G+
Sbjct: 117 LLNEVLVEMAKTIGVYKLSLECKTELIPFYNKFGY 151
>U41508-2|AAN39665.2| 552|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 20,
isoform b protein.
Length = 552
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 119 EWKMRNPWRPVHWSASLRMRSRTKSTISFPMAPR 18
E + +P R H+S S + R K ISFP P+
Sbjct: 289 EGPLSDPNRVRHYSCSTNCKCRGKCAISFPEPPK 322
>AY455927-3|AAR26304.1| 347|Caenorhabditis elegans
phosphoglucosamine acetyltransferaseprotein.
Length = 347
Score = 27.5 bits (58), Expect = 2.9
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = -2
Query: 333 VIDGFIVDHESTIGVFQGGVGCKDRVVGLYNSSGH 229
+++ +V+ TIGV++ + CK ++ YN G+
Sbjct: 117 LLNEVLVEMAKTIGVYKLSLECKTELIPFYNKFGY 151
>AL132951-1|CAC44310.2| 707|Caenorhabditis elegans Hypothetical
protein Y67H2A.1 protein.
Length = 707
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 7/43 (16%)
Frame = +1
Query: 184 GKKCKLECGIYPA-------PQVSTAVVEPYNSILTTHTTLEH 291
GK+ L+CG++P P V +E + +L TH L+H
Sbjct: 33 GKRVMLDCGVHPGLHGVDALPFVDFVEIENIDLLLITHFHLDH 75
>Z36948-1|CAA85409.1| 180|Caenorhabditis elegans Hypothetical
protein D2089.2 protein.
Length = 180
Score = 26.6 bits (56), Expect = 5.0
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 126 WWHRFWFHFSPHGA 167
WW FWF+F +GA
Sbjct: 146 WWMTFWFNFLYYGA 159
>Z73908-3|CAC42305.1| 184|Caenorhabditis elegans Hypothetical
protein F53B2.8 protein.
Length = 184
Score = 25.8 bits (54), Expect = 8.7
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +3
Query: 3 LRDFGTRRHWKGNRRLGPR-PHPQT-R*PMHRPPGIPHLPLVRWWHR 137
LR + H +G+ GP+ P + R P RPP +P+L LV H+
Sbjct: 124 LRSIKEKPH-QGSEAQGPKVPRARKIRVPAPRPPRLPYLALVANLHK 169
>U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical protein
C16A3.3 protein.
Length = 1743
Score = 25.8 bits (54), Expect = 8.7
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -2
Query: 159 EERSETRTGATTERVEDEESLEACALVSEFADAVEDQVYD 40
EE SE E VEDEE E + E D ED+ D
Sbjct: 1422 EEESEEEEEEDEEEVEDEEVDEDASDEEEEVDGEEDESDD 1461
>U13645-7|AAA20989.2| 598|Caenorhabditis elegans Hypothetical
protein C05D10.3 protein.
Length = 598
Score = 25.8 bits (54), Expect = 8.7
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 5/49 (10%)
Frame = -2
Query: 327 DGFIVDHESTIGVFQ-----GGVGCKDRVVGLYNSSGHLGCGIDTALQF 196
D + DHE + V Q G C D V+G+ N L CG L F
Sbjct: 99 DQYYSDHERQLRVEQVLTQMGLKKCADTVIGIPNQLKGLSCGEKKRLSF 147
>AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily
assigned gene nameprotein 80 protein.
Length = 4900
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 183 VVNGESLHEERSETRTGATTERVEDEE 103
+V+ E E+RS +GA ER D+E
Sbjct: 884 IVSSEQHEEDRSSATSGADYERSSDQE 910
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 183 VVNGESLHEERSETRTGATTERVEDEE 103
+V+ E E+RS +GA ER D+E
Sbjct: 1542 IVSSEQHEEDRSSATSGADYERSSDQE 1568
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,606,758
Number of Sequences: 27780
Number of extensions: 171212
Number of successful extensions: 560
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 560
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 472561672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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