Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_F10
         (352 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   0.79 
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   0.79 
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   0.79 
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           21   3.2  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           21   3.2  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   4.2  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    21   5.6  
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    20   9.8  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    20   9.8  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    20   9.8  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 0.79
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 180 VNGESLHEERSETRTGATTERVEDE 106
           V+ E+ H ERS  R+ A    ++DE
Sbjct: 254 VSSETNHNERSTPRSHAKPSLIDDE 278


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 0.79
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 180 VNGESLHEERSETRTGATTERVEDE 106
           V+ E+ H ERS  R+ A    ++DE
Sbjct: 254 VSSETNHNERSTPRSHAKPSLIDDE 278


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 0.79
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 180 VNGESLHEERSETRTGATTERVEDE 106
           V+ E+ H ERS  R+ A    ++DE
Sbjct: 254 VSSETNHNERSTPRSHAKPSLIDDE 278


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 10/19 (52%), Positives = 11/19 (57%), Gaps = 2/19 (10%)
 Frame = +3

Query: 255 QLYPYNPHH--PGTLRLCF 305
           QL PYNP H  PG   L +
Sbjct: 61  QLKPYNPEHKPPGPKDLVY 79


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 10/19 (52%), Positives = 11/19 (57%), Gaps = 2/19 (10%)
 Frame = +3

Query: 255 QLYPYNPHH--PGTLRLCF 305
           QL PYNP H  PG   L +
Sbjct: 62  QLKPYNPEHKPPGPKDLVY 80


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 9/29 (31%), Positives = 12/29 (41%)
 Frame = +3

Query: 27  HWKGNRRLGPRPHPQTR*PMHRPPGIPHL 113
           H  GN  +GP   P      H+   + HL
Sbjct: 336 HQHGNHTMGPTMGPPHHHHHHQTQSLQHL 364


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 204 VRYLSRTPGVHCCCRALQLYP 266
           V+Y +R   +  C    QLYP
Sbjct: 104 VKYSARMHAIIACQMEFQLYP 124


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 28  IGKEIVDLVLDRIRKLADQCTGLQ 99
           IGK+I +L+ + +    ++CT  Q
Sbjct: 49  IGKKIKELLPEVLNNHCNRCTSRQ 72


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
          protein.
          Length = 116

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -2

Query: 66 DAVEDQVYDFLSNGASCRNP 7
          D + +Q YD   +  SC  P
Sbjct: 39 DRLRNQYYDCFIDAGSCLTP 58


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
          protein.
          Length = 116

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -2

Query: 66 DAVEDQVYDFLSNGASCRNP 7
          D + +Q YD   +  SC  P
Sbjct: 39 DRLRNQYYDCFIDAGSCLTP 58


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,585
Number of Sequences: 438
Number of extensions: 2192
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8060325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)