Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_F07
         (149 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   0.64 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   2.6  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    19   3.4  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          19   6.0  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    19   6.0  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    19   6.0  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    19   6.0  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    19   6.0  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    19   6.0  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    19   6.0  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           19   6.0  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    18   7.9  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    18   7.9  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    18   7.9  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    18   7.9  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.8 bits (44), Expect = 0.64
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +3

Query: 15  YSVCLYSY*SIIINMSLLG 71
           Y +C Y + +I+ ++S+LG
Sbjct: 47  YCICGYIFSAILFSLSILG 65


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -2

Query: 70  PSKDIFIMML*YEYRQTLYT 11
           PS D+F     Y  RQTLYT
Sbjct: 101 PSFDLFY----YPSRQTLYT 116


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 19.4 bits (38), Expect = 3.4
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 107 PFLSRPRPV 81
           PFL RP PV
Sbjct: 305 PFLKRPYPV 313


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 149 YSPSR*NLSRYTPVPFLS 96
           Y PS  N  +Y   P++S
Sbjct: 47  YPPSDWNCPQYNAPPYMS 64


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -2

Query: 133 EIYLVILPSRSCPVLVPSYPGPSKDI-FIMML*YEYRQTLY 14
           E YL+ +P +   ++    P P  D+ F + +    R+TLY
Sbjct: 176 EWYLIGMPGKKNTIVYACCPEPYVDVTFTIKI---RRRTLY 213


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -2

Query: 133 EIYLVILPSRSCPVLVPSYPGPSKDI-FIMML*YEYRQTLY 14
           E YL+ +P +   ++    P P  D+ F + +    R+TLY
Sbjct: 176 EWYLIGMPGKKNTIVYACCPEPYVDVTFTIKI---RRRTLY 213


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -2

Query: 133 EIYLVILPSRSCPVLVPSYPGPSKDI-FIMML*YEYRQTLY 14
           E YL+ +P +   ++    P P  D+ F + +    R+TLY
Sbjct: 176 EWYLIGMPGKKNTIVYACCPEPYVDVTFTIKI---RRRTLY 213


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -2

Query: 133 EIYLVILPSRSCPVLVPSYPGPSKDI-FIMML*YEYRQTLY 14
           E YL+ +P +   ++    P P  D+ F + +    R+TLY
Sbjct: 176 EWYLIGMPGKKNTIVYACCPEPYVDVTFTIKI---RRRTLY 213


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -2

Query: 133 EIYLVILPSRSCPVLVPSYPGPSKDI-FIMML*YEYRQTLY 14
           E YL+ +P +   ++    P P  D+ F + +    R+TLY
Sbjct: 176 EWYLIGMPGKKNTIVYACCPEPYVDVTFTIKI---RRRTLY 213


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 9/41 (21%), Positives = 21/41 (51%)
 Frame = -2

Query: 124 LVILPSRSCPVLVPSYPGPSKDIFIMML*YEYRQTLYTHLV 2
           ++I+P+     +VP +    +   I+   ++Y+Q +   LV
Sbjct: 127 ILIIPTCVAMFIVPYFQDRREMPLIVWFPFDYKQPVVFDLV 167


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 149 YSPSR*NLSRYTPVPFLS 96
           Y PS  N  +Y   P++S
Sbjct: 38  YPPSDWNCPQYNAPPYMS 55


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu
          protein.
          Length = 322

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 5/12 (41%), Positives = 8/12 (66%)
 Frame = -3

Query: 39 NMNIDKRYTHTS 4
          N N ++ YTH +
Sbjct: 32 NQNTEQNYTHNN 43


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
          transcription factor Fushitarazu protein.
          Length = 290

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 5/12 (41%), Positives = 8/12 (66%)
 Frame = -3

Query: 39 NMNIDKRYTHTS 4
          N N ++ YTH +
Sbjct: 32 NQNTEQNYTHNN 43


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 131 NLSRYTPVPFLSRPRPV 81
           ++S +  +PF S  RP+
Sbjct: 40  SVSTFFKIPFYSTLRPI 56


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 131 NLSRYTPVPFLSRPRPV 81
           ++S +  +PF S  RP+
Sbjct: 40  SVSTFFKIPFYSTLRPI 56


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,921
Number of Sequences: 336
Number of extensions: 598
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 30
effective length of database: 112,505
effective search space used:  2137595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)