Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_F05
         (236 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    23   1.5  
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      23   2.0  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    21   6.0  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    21   6.0  
AF458073-1|AAL68639.1|  166|Anopheles gambiae D7-related 5 prote...    21   8.0  

>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 40  EQYITDPRHVEVQVFADMHGN 102
           +QY + P H  VQ   ++H N
Sbjct: 324 QQYHSHPHHTPVQFKTELHDN 344


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -2

Query: 181 IPAQALLQ*SFGAVF 137
           IP +ALL  +FGAVF
Sbjct: 353 IPQRALLSCAFGAVF 367


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 6/17 (35%), Positives = 15/17 (88%)
 Frame = +1

Query: 139 RRHQKIIEEAPAPGLSE 189
           R+ ++IIE++ +PG+++
Sbjct: 136 RKRRRIIEDSASPGVNK 152


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 221 TAASPSEKRVSSDNPGAGASS 159
           T ASPS   V++ + G G S+
Sbjct: 749 TRASPSSPIVATSSSGGGGSN 769


>AF458073-1|AAL68639.1|  166|Anopheles gambiae D7-related 5 protein
           protein.
          Length = 166

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 179 PGAGASSMIFWCRLCTEQSLS 117
           PG   S   F C L TE +L+
Sbjct: 106 PGTERSGYFFSCMLRTESALN 126


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 260,565
Number of Sequences: 2352
Number of extensions: 4416
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 52
effective length of database: 441,675
effective search space used: 11483550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)