Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_F05
         (236 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    19   6.2  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    19   6.2  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    19   6.2  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       19   8.3  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    19   8.3  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    19   8.3  

>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 19.4 bits (38), Expect = 6.2
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 77  RYLQICMEMLY 109
           RYL IC  +LY
Sbjct: 1   RYLAICNPLLY 11


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 19.4 bits (38), Expect = 6.2
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 117 KQMYSISMHICKYLH 73
           K  +S+ +H+ KY H
Sbjct: 55  KYCHSLKLHLRKYSH 69


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 19.4 bits (38), Expect = 6.2
 Identities = 6/24 (25%), Positives = 9/24 (37%)
 Frame = -1

Query: 116 NKCTAFPCISANTCTSTCLGSVMY 45
           +KC+ +       C   C G   Y
Sbjct: 151 DKCSTYQSNGEEVCLENCTGYQQY 174


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 19.0 bits (37), Expect = 8.3
 Identities = 4/11 (36%), Positives = 9/11 (81%)
 Frame = -1

Query: 77  CTSTCLGSVMY 45
           CT++C+  ++Y
Sbjct: 306 CTNSCMNPIVY 316


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 19.0 bits (37), Expect = 8.3
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -2

Query: 220 LPLHRAKSES 191
           L LHRA+SES
Sbjct: 731 LYLHRARSES 740


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 19.0 bits (37), Expect = 8.3
 Identities = 8/28 (28%), Positives = 12/28 (42%)
 Frame = +1

Query: 31  MLLEQYITDPRHVEVQVFADMHGNAVHL 114
           +LL      PR   +    D+H   +HL
Sbjct: 887 LLLHLTPLQPRFYSISSSPDVHQGQIHL 914


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,144
Number of Sequences: 438
Number of extensions: 1067
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  3898467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)