Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_F04
         (208 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9Y6R7 Cluster: IgGFc-binding protein precursor; n=19; ...    31   6.8  
UniRef50_A0EFT0 Cluster: Chromosome undetermined scaffold_94, wh...    30   9.0  

>UniRef50_Q9Y6R7 Cluster: IgGFc-binding protein precursor; n=19;
            Theria|Rep: IgGFc-binding protein precursor - Homo
            sapiens (Human)
          Length = 5405

 Score = 30.7 bits (66), Expect = 6.8
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +3

Query: 108  EQCACSCTSIISCNTYGPAPAAI-DVWSNGRYCW 206
            E+C+CS +S ++C   G  P  + +V +  R CW
Sbjct: 5196 ERCSCSSSSGLTCQAAGCPPGRVCEVKAEARNCW 5229


>UniRef50_A0EFT0 Cluster: Chromosome undetermined scaffold_94, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_94,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1034

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 12/42 (28%), Positives = 25/42 (59%)
 Frame = -1

Query: 148 LQEMMEVHEQAHCSVVEQLFVEALVEGLQIVLFEAWFIDFLY 23
           L  ++++HEQ    ++++ F+    E +QI+L + + I F Y
Sbjct: 636 LDHLIQLHEQLLNEIIDRTFLHQKQEEIQIILLKLFEISFRY 677


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,446,790
Number of Sequences: 1657284
Number of extensions: 1506410
Number of successful extensions: 4157
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4156
length of database: 575,637,011
effective HSP length: 47
effective length of database: 497,744,663
effective search space used: 10452637923
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)