Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_F04
         (208 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    20   2.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    19   5.5  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    19   5.5  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    19   5.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    19   7.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    19   7.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    19   7.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    19   7.2  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    19   7.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    18   9.6  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    18   9.6  

>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +3

Query: 153 YGPAPAAIDVWSNGRY 200
           Y P P+  D W N  Y
Sbjct: 27  YSPPPSYCDPWYNPYY 42


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +2

Query: 179 CLVKWPLL 202
           C +KWPLL
Sbjct: 524 CGMKWPLL 531


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 8/26 (30%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
 Frame = +3

Query: 132 SIISCNTYGPAPAAIDVWSNG-RYCW 206
           S++  N Y P P  + +  N   YC+
Sbjct: 263 SVLFQNVYKPLPIVLSIVKNCLSYCF 288


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 8/26 (30%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
 Frame = +3

Query: 132 SIISCNTYGPAPAAIDVWSNG-RYCW 206
           S++  N Y P P  + +  N   YC+
Sbjct: 263 SVLFQNVYKPLPIVLSIVKNCLSYCF 288


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 100 EQLFVEALVEGLQI 59
           E+LFV  + EGL I
Sbjct: 493 EKLFVTPMYEGLLI 506


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 100 EQLFVEALVEGLQI 59
           E+LFV  + EGL I
Sbjct: 493 EKLFVTPMYEGLLI 506


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 100 EQLFVEALVEGLQI 59
           E+LFV  + EGL I
Sbjct: 493 EKLFVTPMYEGLLI 506


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 100 EQLFVEALVEGLQI 59
           E+LFV  + EGL I
Sbjct: 493 EKLFVTPMYEGLLI 506


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 15  DDTYKKSINHA 47
           D TY++S  HA
Sbjct: 129 DKTYRRSYTHA 139


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -1

Query: 115 HCSVVEQLFVEALVEGLQIVL 53
           +CS+   +  E L+EG   +L
Sbjct: 415 YCSLAIFVLCELLIEGTTSIL 435


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 67  LQIVLFEAWFIDFLY 23
           +Q +   A +IDFLY
Sbjct: 134 IQTLKLAARYIDFLY 148


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,025
Number of Sequences: 336
Number of extensions: 403
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 44
effective length of database: 107,801
effective search space used:  2587224
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)