Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_F04
         (208 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismuta...    21   4.0  
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    21   5.3  

>AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismutase
           1 protein.
          Length = 206

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 157 P*VLQEMMEVHEQAH 113
           P + +E+ME+H Q H
Sbjct: 48  PVICREIMELHHQKH 62


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 159 PAPAAIDVWSNGRYCW 206
           PA +A D+W+  ++ W
Sbjct: 285 PARSADDLWTRCKFMW 300


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,173
Number of Sequences: 2352
Number of extensions: 1759
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 563,979
effective HSP length: 46
effective length of database: 455,787
effective search space used: 10027314
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)