Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_F04
         (208 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein pr...    31   0.90 
AC006950-2|AAD15624.1|  735|Homo sapiens IgG Fc binding protein ...    31   0.90 

>D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein
            protein.
          Length = 5405

 Score = 30.7 bits (66), Expect = 0.90
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +3

Query: 108  EQCACSCTSIISCNTYGPAPAAI-DVWSNGRYCW 206
            E+C+CS +S ++C   G  P  + +V +  R CW
Sbjct: 5196 ERCSCSSSSGLTCQAAGCPPGRVCEVKAEARNCW 5229


>AC006950-2|AAD15624.1|  735|Homo sapiens IgG Fc binding protein [AA
           4671-5405] protein.
          Length = 735

 Score = 30.7 bits (66), Expect = 0.90
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +3

Query: 108 EQCACSCTSIISCNTYGPAPAAI-DVWSNGRYCW 206
           E+C+CS +S ++C   G  P  + +V +  R CW
Sbjct: 526 ERCSCSSSSGLTCQAAGCPPGRVCEVKAEARNCW 559


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,996,150
Number of Sequences: 237096
Number of extensions: 244716
Number of successful extensions: 740
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 76,859,062
effective HSP length: 47
effective length of database: 65,715,550
effective search space used: 1380026550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)