Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_F01
         (268 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    20   4.0  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    20   5.3  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    20   5.3  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          20   5.3  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    19   7.0  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       19   9.3  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.2 bits (40), Expect = 4.0
 Identities = 7/25 (28%), Positives = 11/25 (44%)
 Frame = -2

Query: 234 RDRSLVGWMSWPIAKFFVLFSNRGF 160
           R  S +GW  W + + + L     F
Sbjct: 563 RPISTLGWFFWSLLRIYELARKAAF 587


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 19.8 bits (39), Expect = 5.3
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -1

Query: 142 NFLHHKWSGHY 110
           NFL+H +  HY
Sbjct: 403 NFLNHNFDRHY 413


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 19.8 bits (39), Expect = 5.3
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -3

Query: 191 SSLFSSRIEGLQSSWAQLSSPQVE 120
           S + S  I+  + +W+ L +PQ E
Sbjct: 35  SGINSQMIDYSRPNWSYLRTPQFE 58


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 19.8 bits (39), Expect = 5.3
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -3

Query: 191 SSLFSSRIEGLQSSWAQLSSPQVE 120
           S + S  I+  + +W+ L +PQ E
Sbjct: 55  SGINSQMIDYSRPNWSYLRTPQFE 78


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 19.4 bits (38), Expect = 7.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 144 SPRRL*TLYSRREQRTLLLARTSS 215
           SPR      + R+ R L+LA TSS
Sbjct: 241 SPRARPLARTCRDNRLLVLAGTSS 264


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 19.0 bits (37), Expect = 9.3
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 163 VYNLLGLNFLHHK 125
           VYN+  L F H +
Sbjct: 456 VYNMTNLKFYHRR 468


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,399
Number of Sequences: 336
Number of extensions: 894
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  4378513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)