Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_F01
         (268 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    71   7e-15
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   1.5  
Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS...    22   4.5  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    21   5.9  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         21   5.9  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    21   7.8  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    21   7.8  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    21   7.8  

>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 70.9 bits (166), Expect = 7e-15
 Identities = 29/36 (80%), Positives = 33/36 (91%)
 Frame = +2

Query: 161 NPLFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQ 268
           NPLFEKR KN+ IGQ++QP RDLSRFV+WPKYIRIQ
Sbjct: 35  NPLFEKRVKNYGIGQNVQPKRDLSRFVKWPKYIRIQ 70


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 97  DREKSSGRSTCGEES*AQEDCKPS 168
           DR ++ GRS C   S +  D +PS
Sbjct: 884 DRSEAGGRSLCTNGSSSGRDSQPS 907


>Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein
          RS11 protein.
          Length = 151

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +1

Query: 19 GHVSIRGR*IT 51
          GH+SIRGR +T
Sbjct: 59 GHISIRGRILT 69


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +1

Query: 157 CKPSIREENKEL 192
           C+P++ E+NK+L
Sbjct: 340 CRPTVDEKNKQL 351


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 175  EENKELCYWPGHPANQRSIPFRAMAE 252
            E +   CY P +   Q SIP +++A+
Sbjct: 1850 EADNGSCYIPYNLVTQHSIPDKSVAD 1875


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +2

Query: 188 NFAIGQDIQPTRDLSRFVRWPKY 256
           NFA   +  P    S F  WPK+
Sbjct: 635 NFAKTGNPNPNTASSEFPEWPKH 657


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +2

Query: 188 NFAIGQDIQPTRDLSRFVRWPKY 256
           NFA   +  P    S F  WPK+
Sbjct: 635 NFAKTGNPNPNTASSEFPEWPKH 657


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +2

Query: 188 NFAIGQDIQPTRDLSRFVRWPKY 256
           NFA   +  P    S F  WPK+
Sbjct: 521 NFAKTGNPNPNTASSEFPEWPKH 543


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 240,751
Number of Sequences: 2352
Number of extensions: 3191
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 14857014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)