Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_F01
         (268 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal prot...    69   7e-13
AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p pro...    69   7e-13
AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,...    69   7e-13
AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,...    69   7e-13
AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,...    69   7e-13
AY119103-1|AAM50963.1|  853|Drosophila melanogaster RE06730p pro...    27   4.8  
AE014297-2882|AAF55818.1|  853|Drosophila melanogaster CG3822-PA...    27   4.8  

>X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal protein
           L7a protein.
          Length = 271

 Score = 69.3 bits (162), Expect = 7e-13
 Identities = 29/36 (80%), Positives = 32/36 (88%)
 Frame = +2

Query: 161 NPLFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQ 268
           N LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+Q
Sbjct: 34  NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQ 69


>AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p
           protein.
          Length = 271

 Score = 69.3 bits (162), Expect = 7e-13
 Identities = 29/36 (80%), Positives = 32/36 (88%)
 Frame = +2

Query: 161 NPLFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQ 268
           N LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+Q
Sbjct: 34  NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQ 69


>AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,
           isoform D protein.
          Length = 271

 Score = 69.3 bits (162), Expect = 7e-13
 Identities = 29/36 (80%), Positives = 32/36 (88%)
 Frame = +2

Query: 161 NPLFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQ 268
           N LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+Q
Sbjct: 34  NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQ 69


>AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,
           isoform C protein.
          Length = 271

 Score = 69.3 bits (162), Expect = 7e-13
 Identities = 29/36 (80%), Positives = 32/36 (88%)
 Frame = +2

Query: 161 NPLFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQ 268
           N LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+Q
Sbjct: 34  NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQ 69


>AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,
           isoform A protein.
          Length = 271

 Score = 69.3 bits (162), Expect = 7e-13
 Identities = 29/36 (80%), Positives = 32/36 (88%)
 Frame = +2

Query: 161 NPLFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQ 268
           N LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+Q
Sbjct: 34  NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQ 69


>AY119103-1|AAM50963.1|  853|Drosophila melanogaster RE06730p
           protein.
          Length = 853

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +3

Query: 207 TSSQPEIYPVSCDGRN 254
           TS Q +I+P+SCDG++
Sbjct: 320 TSQQIDIHPISCDGQS 335


>AE014297-2882|AAF55818.1|  853|Drosophila melanogaster CG3822-PA
           protein.
          Length = 853

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +3

Query: 207 TSSQPEIYPVSCDGRN 254
           TS Q +I+P+SCDG++
Sbjct: 320 TSQQIDIHPISCDGQS 335


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,223,124
Number of Sequences: 53049
Number of extensions: 149542
Number of successful extensions: 241
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 241
length of database: 24,988,368
effective HSP length: 67
effective length of database: 21,434,085
effective search space used: 450115785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)