Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_E24
         (217 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    22   2.2  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           21   6.9  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           21   6.9  

>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 2   YWRIC*EKCCPLVLF 46
           YWR+C     PL++F
Sbjct: 535 YWRLCWRWITPLLMF 549


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +3

Query: 93  TSPASLW*DFVRFYSTPSPLTLVSREILP 179
           T+  ++W D     +TP+P T  +   LP
Sbjct: 183 TTTTTVWTDPTATTTTPAPTTTTTWSDLP 211


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +3

Query: 93  TSPASLW*DFVRFYSTPSPLTLVSREILP 179
           T+  ++W D     +TP+P T  +   LP
Sbjct: 183 TTTTTVWTDPTATTTTPAPTTTTTWSDLP 211


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,332
Number of Sequences: 2352
Number of extensions: 3387
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 49
effective length of database: 448,731
effective search space used:  9872082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)