Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_E23
         (293 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011369-1|AAR96161.1|  261|Drosophila melanogaster RE57333p pro...   167   3e-42
AE014296-2240|AAF49846.1|  261|Drosophila melanogaster CG11276-P...   167   3e-42
AE014296-2239|AAF49847.1|  261|Drosophila melanogaster CG11276-P...   167   3e-42
D16257-1|BAA03786.1|  261|Drosophila melanogaster ribosomal prot...   161   1e-40
AY060712-1|AAL28260.1|  280|Drosophila melanogaster GH15448p pro...    27   4.0  
AF435962-1|AAL31972.1|  280|Drosophila melanogaster mitochondria...    27   4.0  
AE014297-2185|AAF55297.1|  485|Drosophila melanogaster CG6901-PA...    27   4.0  
AE013599-3422|AAF46869.1|  280|Drosophila melanogaster CG4207-PA...    27   4.0  
AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin pro...    27   5.4  
AJ245406-1|CAB76253.1| 4001|Drosophila melanogaster kettin protein.    27   5.4  
AJ238575-1|CAB43710.1|  187|Drosophila melanogaster titin protein.     27   5.4  
AF045775-1|AAC23966.1|  880|Drosophila melanogaster titin protein.     27   5.4  
AE014296-406|AAF47604.1| 4796|Drosophila melanogaster CG1915-PA,...    27   5.4  
AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC...    27   5.4  
AB026845-1|BAA90301.2| 4796|Drosophila melanogaster kettin protein.    27   5.4  
BT009966-1|AAQ22435.1| 1091|Drosophila melanogaster RE68041p pro...    26   7.1  
AY119597-1|AAM50251.1|  712|Drosophila melanogaster LD19808p pro...    26   7.1  
AY118354-1|AAM48383.1| 1351|Drosophila melanogaster RE01412p pro...    26   7.1  
AJ291605-1|CAC20097.1| 1351|Drosophila melanogaster gamma tubuli...    26   7.1  
AF158179-1|AAD48780.1| 1711|Drosophila melanogaster Chiffon-2 pr...    26   7.1  
AF158178-1|AAD48779.1| 1695|Drosophila melanogaster Chiffon prot...    26   7.1  
AE014296-2088|AAF49966.3| 1093|Drosophila melanogaster CG5661-PA...    26   7.1  
AE014296-2076|AAF49973.2| 1351|Drosophila melanogaster CG5688-PA...    26   7.1  
AE014134-2711|AAG22437.1| 1695|Drosophila melanogaster CG5813-PB...    26   7.1  
AE014134-2710|AAF53530.1| 1711|Drosophila melanogaster CG5813-PA...    26   7.1  
Y16899-1|CAA76529.1|  712|Drosophila melanogaster optomotor-blin...    26   9.4  
BT022156-1|AAY51551.1|  427|Drosophila melanogaster IP01408p pro...    26   9.4  
AE014298-1177|AAF46373.1|  699|Drosophila melanogaster CG11202-P...    26   9.4  

>BT011369-1|AAR96161.1|  261|Drosophila melanogaster RE57333p
           protein.
          Length = 261

 Score =  167 bits (405), Expect = 3e-42
 Identities = 77/88 (87%), Positives = 81/88 (92%)
 Frame = +2

Query: 29  MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 208
           MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E
Sbjct: 1   MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60

Query: 209 VLKIVKQRLIKVDGKVRTDATYPAGFMD 292
           V KIV QRL+KVDGKVRTD TYPAG+MD
Sbjct: 61  VTKIVMQRLVKVDGKVRTDPTYPAGYMD 88


>AE014296-2240|AAF49846.1|  261|Drosophila melanogaster CG11276-PB,
           isoform B protein.
          Length = 261

 Score =  167 bits (405), Expect = 3e-42
 Identities = 77/88 (87%), Positives = 81/88 (92%)
 Frame = +2

Query: 29  MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 208
           MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E
Sbjct: 1   MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60

Query: 209 VLKIVKQRLIKVDGKVRTDATYPAGFMD 292
           V KIV QRL+KVDGKVRTD TYPAG+MD
Sbjct: 61  VTKIVMQRLVKVDGKVRTDPTYPAGYMD 88


>AE014296-2239|AAF49847.1|  261|Drosophila melanogaster CG11276-PA,
           isoform A protein.
          Length = 261

 Score =  167 bits (405), Expect = 3e-42
 Identities = 77/88 (87%), Positives = 81/88 (92%)
 Frame = +2

Query: 29  MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 208
           MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E
Sbjct: 1   MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60

Query: 209 VLKIVKQRLIKVDGKVRTDATYPAGFMD 292
           V KIV QRL+KVDGKVRTD TYPAG+MD
Sbjct: 61  VTKIVMQRLVKVDGKVRTDPTYPAGYMD 88


>D16257-1|BAA03786.1|  261|Drosophila melanogaster ribosomal protein
           S4 protein.
          Length = 261

 Score =  161 bits (391), Expect = 1e-40
 Identities = 75/88 (85%), Positives = 79/88 (89%)
 Frame = +2

Query: 29  MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 208
           MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+ FLRNRLKYAL G E
Sbjct: 1   MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLTFLRNRLKYALNGAE 60

Query: 209 VLKIVKQRLIKVDGKVRTDATYPAGFMD 292
           V KIV QRL+KV GKVRTD TYPAG+MD
Sbjct: 61  VTKIVMQRLVKVYGKVRTDPTYPAGYMD 88


>AY060712-1|AAL28260.1|  280|Drosophila melanogaster GH15448p
           protein.
          Length = 280

 Score = 27.1 bits (57), Expect = 4.0
 Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +2

Query: 47  KHLKRLNAPK-AWMLDKLGGVYAPRPS 124
           K+L+R + P+  W+L+KL  VY P P+
Sbjct: 153 KYLRRWDYPRFEWILEKLDLVYKPPPT 179


>AF435962-1|AAL31972.1|  280|Drosophila melanogaster mitochondrial
           ribosomal proteinS15 protein.
          Length = 280

 Score = 27.1 bits (57), Expect = 4.0
 Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +2

Query: 47  KHLKRLNAPK-AWMLDKLGGVYAPRPS 124
           K+L+R + P+  W+L+KL  VY P P+
Sbjct: 153 KYLRRWDYPRFEWILEKLDLVYKPPPT 179


>AE014297-2185|AAF55297.1|  485|Drosophila melanogaster CG6901-PA
           protein.
          Length = 485

 Score = 27.1 bits (57), Expect = 4.0
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -3

Query: 270 VASVRTFPSTLMRRCFTILSTSLPVS 193
           VASV  F   L+ RCF   S SLP++
Sbjct: 273 VASVMPFLKMLLFRCFVAFSFSLPLT 298


>AE013599-3422|AAF46869.1|  280|Drosophila melanogaster CG4207-PA
           protein.
          Length = 280

 Score = 27.1 bits (57), Expect = 4.0
 Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +2

Query: 47  KHLKRLNAPK-AWMLDKLGGVYAPRPS 124
           K+L+R + P+  W+L+KL  VY P P+
Sbjct: 153 KYLRRWDYPRFEWILEKLDLVYKPPPT 179


>AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin
           protein.
          Length = 16215

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -3

Query: 174 RRKITSGKHSRSLWGPVEGRGAYTPPSLSNIHALG 70
           R ++T+ +  +   G   G GAY PPSL++++A G
Sbjct: 49  RSQVTTQRQVQQHHGGSIG-GAYVPPSLTHVYAQG 82


>AJ245406-1|CAB76253.1| 4001|Drosophila melanogaster kettin protein.
          Length = 4001

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -3

Query: 174 RRKITSGKHSRSLWGPVEGRGAYTPPSLSNIHALG 70
           R ++T+ +  +   G   G GAY PPSL++++A G
Sbjct: 49  RSQVTTQRQVQQHHGGSIG-GAYVPPSLTHVYAQG 82


>AJ238575-1|CAB43710.1|  187|Drosophila melanogaster titin protein.
          Length = 187

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -3

Query: 174 RRKITSGKHSRSLWGPVEGRGAYTPPSLSNIHALG 70
           R ++T+ +  +   G   G GAY PPSL++++A G
Sbjct: 49  RSQVTTQRQVQQHHGGSIG-GAYVPPSLTHVYAQG 82


>AF045775-1|AAC23966.1|  880|Drosophila melanogaster titin protein.
          Length = 880

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -3

Query: 174 RRKITSGKHSRSLWGPVEGRGAYTPPSLSNIHALG 70
           R ++T+ +  +   G   G GAY PPSL++++A G
Sbjct: 49  RSQVTTQRQVQQHHGGSIG-GAYVPPSLTHVYAQG 82


>AE014296-406|AAF47604.1| 4796|Drosophila melanogaster CG1915-PA,
           isoform A protein.
          Length = 4796

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -3

Query: 174 RRKITSGKHSRSLWGPVEGRGAYTPPSLSNIHALG 70
           R ++T+ +  +   G   G GAY PPSL++++A G
Sbjct: 49  RSQVTTQRQVQQHHGGSIG-GAYVPPSLTHVYAQG 82


>AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC,
           isoform C protein.
          Length = 18074

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -3

Query: 174 RRKITSGKHSRSLWGPVEGRGAYTPPSLSNIHALG 70
           R ++T+ +  +   G   G GAY PPSL++++A G
Sbjct: 49  RSQVTTQRQVQQHHGGSIG-GAYVPPSLTHVYAQG 82


>AB026845-1|BAA90301.2| 4796|Drosophila melanogaster kettin protein.
          Length = 4796

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -3

Query: 174 RRKITSGKHSRSLWGPVEGRGAYTPPSLSNIHALG 70
           R ++T+ +  +   G   G GAY PPSL++++A G
Sbjct: 49  RSQVTTQRQVQQHHGGSIG-GAYVPPSLTHVYAQG 82


>BT009966-1|AAQ22435.1| 1091|Drosophila melanogaster RE68041p
           protein.
          Length = 1091

 Score = 26.2 bits (55), Expect = 7.1
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
 Frame = +3

Query: 42  QRST*SV*TPLKHG---CWTSWAACT 110
           Q S+ S+   L+HG   CW+ W+AC+
Sbjct: 836 QLSSNSLDNELEHGEWGCWSEWSACS 861


>AY119597-1|AAM50251.1|  712|Drosophila melanogaster LD19808p
           protein.
          Length = 712

 Score = 26.2 bits (55), Expect = 7.1
 Identities = 21/65 (32%), Positives = 32/65 (49%)
 Frame = -3

Query: 276 GYVASVRTFPSTLMRRCFTILSTSLPVSAYLSRFRRKITSGKHSRSLWGPVEGRGAYTPP 97
           G V S  + P+T ++R +TI  T      Y  RF ++I + +  + L G  EG G  T  
Sbjct: 141 GVVNSGNSTPTTSLKRSYTIWQTD-----YAQRFIKRIQT-ELKQYLEGKKEGGGGSTSA 194

Query: 96  SLSNI 82
           S  +I
Sbjct: 195 SPHHI 199


>AY118354-1|AAM48383.1| 1351|Drosophila melanogaster RE01412p protein.
          Length = 1351

 Score = 26.2 bits (55), Expect = 7.1
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 131  PHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLI 238
            P   R CL L +       Y L  NEVL+I +++ I
Sbjct: 996  PFMARRCLQLSVMAPLNAYYGLLRNEVLRIFQEQRI 1031


>AJ291605-1|CAC20097.1| 1351|Drosophila melanogaster gamma tubulin
            ring protein protein.
          Length = 1351

 Score = 26.2 bits (55), Expect = 7.1
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 131  PHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLI 238
            P   R CL L +       Y L  NEVL+I +++ I
Sbjct: 996  PFMARRCLQLSVMAPLNAYYGLLRNEVLRIFQEQRI 1031


>AF158179-1|AAD48780.1| 1711|Drosophila melanogaster Chiffon-2
           protein.
          Length = 1711

 Score = 26.2 bits (55), Expect = 7.1
 Identities = 21/65 (32%), Positives = 32/65 (49%)
 Frame = -3

Query: 276 GYVASVRTFPSTLMRRCFTILSTSLPVSAYLSRFRRKITSGKHSRSLWGPVEGRGAYTPP 97
           G V S  + P+T ++R +TI  T      Y  RF ++I + +  + L G  EG G  T  
Sbjct: 141 GVVNSGNSTPTTSLKRSYTIWQTD-----YAQRFIKRIQT-ELKQYLEGKKEGGGGSTSA 194

Query: 96  SLSNI 82
           S  +I
Sbjct: 195 SPHHI 199


>AF158178-1|AAD48779.1| 1695|Drosophila melanogaster Chiffon
           protein.
          Length = 1695

 Score = 26.2 bits (55), Expect = 7.1
 Identities = 21/65 (32%), Positives = 32/65 (49%)
 Frame = -3

Query: 276 GYVASVRTFPSTLMRRCFTILSTSLPVSAYLSRFRRKITSGKHSRSLWGPVEGRGAYTPP 97
           G V S  + P+T ++R +TI  T      Y  RF ++I + +  + L G  EG G  T  
Sbjct: 141 GVVNSGNSTPTTSLKRSYTIWQTD-----YAQRFIKRIQT-ELKQYLEGKKEGGGGSTSA 194

Query: 96  SLSNI 82
           S  +I
Sbjct: 195 SPHHI 199


>AE014296-2088|AAF49966.3| 1093|Drosophila melanogaster CG5661-PA
           protein.
          Length = 1093

 Score = 26.2 bits (55), Expect = 7.1
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
 Frame = +3

Query: 42  QRST*SV*TPLKHG---CWTSWAACT 110
           Q S+ S+   L+HG   CW+ W+AC+
Sbjct: 838 QLSSNSLDNELEHGEWGCWSEWSACS 863


>AE014296-2076|AAF49973.2| 1351|Drosophila melanogaster CG5688-PA
            protein.
          Length = 1351

 Score = 26.2 bits (55), Expect = 7.1
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 131  PHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLI 238
            P   R CL L +       Y L  NEVL+I +++ I
Sbjct: 996  PFMARRCLQLSVMAPLNAYYGLLRNEVLRIFQEQRI 1031


>AE014134-2711|AAG22437.1| 1695|Drosophila melanogaster CG5813-PB,
           isoform B protein.
          Length = 1695

 Score = 26.2 bits (55), Expect = 7.1
 Identities = 21/65 (32%), Positives = 32/65 (49%)
 Frame = -3

Query: 276 GYVASVRTFPSTLMRRCFTILSTSLPVSAYLSRFRRKITSGKHSRSLWGPVEGRGAYTPP 97
           G V S  + P+T ++R +TI  T      Y  RF ++I + +  + L G  EG G  T  
Sbjct: 141 GVVNSGNSTPTTSLKRSYTIWQTD-----YAQRFIKRIQT-ELKQYLEGKKEGGGGSTSA 194

Query: 96  SLSNI 82
           S  +I
Sbjct: 195 SPHHI 199


>AE014134-2710|AAF53530.1| 1711|Drosophila melanogaster CG5813-PA,
           isoform A protein.
          Length = 1711

 Score = 26.2 bits (55), Expect = 7.1
 Identities = 21/65 (32%), Positives = 32/65 (49%)
 Frame = -3

Query: 276 GYVASVRTFPSTLMRRCFTILSTSLPVSAYLSRFRRKITSGKHSRSLWGPVEGRGAYTPP 97
           G V S  + P+T ++R +TI  T      Y  RF ++I + +  + L G  EG G  T  
Sbjct: 141 GVVNSGNSTPTTSLKRSYTIWQTD-----YAQRFIKRIQT-ELKQYLEGKKEGGGGSTSA 194

Query: 96  SLSNI 82
           S  +I
Sbjct: 195 SPHHI 199


>Y16899-1|CAA76529.1|  712|Drosophila melanogaster
           optomotor-blind-related gene-1 protein.
          Length = 712

 Score = 25.8 bits (54), Expect = 9.4
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -3

Query: 159 SGKHSRSLWGPVEGRGAYTPPSLSNIHALGAFKRFK 52
           +G HS +   P  G  A T  S   + A  A K+FK
Sbjct: 124 AGVHSEASMAPTAGGTAVTTTSAGGVSASTASKKFK 159


>BT022156-1|AAY51551.1|  427|Drosophila melanogaster IP01408p
           protein.
          Length = 427

 Score = 25.8 bits (54), Expect = 9.4
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = -3

Query: 276 GYVASVRTFPSTLMRRCFTILSTSLPVSAYL-SRFRRKITSGKHSRSLWGPVEGRGAYTP 100
           G  +S  T+PS      +++  T    S  L S+F     SG H  S W      G++ P
Sbjct: 338 GVGSSNATYPSA----AYSMPQTPATSSEQLRSQFASAAASGSHHPSTWDSYNFAGSFFP 393

Query: 99  PS 94
           P+
Sbjct: 394 PA 395


>AE014298-1177|AAF46373.1|  699|Drosophila melanogaster CG11202-PA
           protein.
          Length = 699

 Score = 25.8 bits (54), Expect = 9.4
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -3

Query: 159 SGKHSRSLWGPVEGRGAYTPPSLSNIHALGAFKRFK 52
           +G HS +   P  G  A T  S   + A  A K+FK
Sbjct: 124 AGVHSEASMAPTAGGTAVTTTSAGGVSASTASKKFK 159


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,515,978
Number of Sequences: 53049
Number of extensions: 244283
Number of successful extensions: 655
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 506778984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)