Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_E22
(322 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 43 4e-05
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 37 0.003
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 36 0.007
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 34 0.026
Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical pr... 32 0.080
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 32 0.080
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 32 0.080
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 31 0.14
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 31 0.14
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 31 0.24
U64601-10|AAP40523.1| 91|Caenorhabditis elegans Hypothetical p... 30 0.43
U64601-9|AAB04578.1| 314|Caenorhabditis elegans Hypothetical pr... 30 0.43
AF228528-1|AAF34189.1| 314|Caenorhabditis elegans calumenin-lik... 30 0.43
Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 28 1.7
Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 28 1.7
Z81543-2|CAB04424.1| 309|Caenorhabditis elegans Hypothetical pr... 27 2.3
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 27 2.3
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 27 2.3
U41992-3|AAL02507.1| 134|Caenorhabditis elegans Hypothetical pr... 27 3.0
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 27 3.0
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 27 3.0
Z71177-8|CAA94866.2| 525|Caenorhabditis elegans Hypothetical pr... 27 4.0
U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily ass... 27 4.0
L15313-1|AAA28202.1| 305|Caenorhabditis elegans Hypothetical pr... 27 4.0
AL033508-3|CAA22054.1| 315|Caenorhabditis elegans Hypothetical ... 27 4.0
AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical... 27 4.0
Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical pr... 26 5.3
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 26 5.3
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 26 7.0
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 25 9.2
U42830-2|AAC48274.1| 243|Caenorhabditis elegans Hypothetical pr... 25 9.2
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 25 9.2
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 43.2 bits (97), Expect = 4e-05
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 158 DGQYEDERQCDKFYECLDGVATTKICPDGLVFDPTIRKINKCDQPFNV-DCGHRTE 322
DG + F+ C +G+A + CP LVF+P I+ CD P NV DC ++E
Sbjct: 182 DGNISKSECSNVFFSCSEGIAHRRNCPANLVFNPA---ISSCDWPKNVMDCSEKSE 234
Score = 39.5 bits (88), Expect = 5e-04
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +2
Query: 146 CPNKDGQYEDERQCDKFYECLDGVATTKICPDGLVFDPTIRKINKCDQPFNVD 304
C DG + R F C +G+ CPDGL+F K CD +NVD
Sbjct: 239 CGEVDGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFS---EKNQMCDYEWNVD 288
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/39 (30%), Positives = 16/39 (41%)
Frame = +2
Query: 155 KDGQYEDERQCDKFYECLDGVATTKICPDGLVFDPTIRK 271
KDG Y + C G C L++DPT +K
Sbjct: 123 KDGVYSSGTCSSSYIICNSGSPRFLSCSTPLIYDPTNKK 161
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 37.1 bits (82), Expect = 0.003
Identities = 21/66 (31%), Positives = 29/66 (43%)
Frame = +2
Query: 110 TAVAALASAQFKCPNKDGQYEDERQCDKFYECLDGVATTKICPDGLVFDPTIRKINKCDQ 289
T + FKC KDG + C KF C++G++ CP+GL F CD+
Sbjct: 554 TRAPTTTTPAFKC-TKDGFFGVPSDCLKFIRCVNGISYNFECPNGLSFHADTM---MCDR 609
Query: 290 PFNVDC 307
P C
Sbjct: 610 PDPSKC 615
Score = 31.5 bits (68), Expect = 0.14
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +2
Query: 113 AVAALASAQFKCPNK-DGQYEDERQCDKFYECLDGVATTKICPDGLVFDPTIR 268
A AS C K DG Y + C F CL + + CP GL + +++
Sbjct: 470 ATTTTASNTNVCSGKSDGFYPNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLK 522
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 35.9 bits (79), Expect = 0.007
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +2
Query: 143 KCPNKDGQYEDERQCDKFYECLDGVATTKICPDGLVFDPTIRKINKCDQP 292
+C D C+ FY C+ G CP G VF+P ++ CD P
Sbjct: 1244 ECSEHGSFIADANNCEVFYRCVWGRKVVMTCPSGTVFNPL---LSVCDWP 1290
Score = 31.5 bits (68), Expect = 0.14
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 131 SAQFKCPN-KDGQYEDERQCDKFYECLDGVATTKICPDGLVFD 256
S F C +DG Y D D FY C + + + CP G VF+
Sbjct: 188 SIDFDCNGLEDGNYADGCN-DVFYSCSNNMVFQRYCPPGTVFN 229
Score = 30.7 bits (66), Expect = 0.24
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 134 AQFKCPNK-DGQYEDERQCDKFYECLDGVATTKICPDGLVFDPTIRKINK-CDQ 289
A+F C +K DG Y ++F C+ G A CPD LVF+ + + CD+
Sbjct: 95 AEFDCTSKQDGIYSIGCS-NQFISCVAGGAYMAKCPDSLVFNERTQDCRESCDE 147
Score = 29.9 bits (64), Expect = 0.43
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = +2
Query: 146 CPNK-DGQYEDERQCDKFYECLDG-VATTKICPDGLVFDPTIRKINKCDQPFNV 301
C K DG Y +ER C +C G + C L F+ + KCD P V
Sbjct: 1182 CDGKEDGLYRNERDCSAILQCFGGELFEHPSCQSSLAFN---QLTGKCDYPQKV 1232
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 33.9 bits (74), Expect = 0.026
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +2
Query: 125 LASAQFKCPN-KDGQYEDERQCDKFYECLDGVATTKICPDGLVFDPTIRKINKCDQPFNV 301
+A F C + DG + FY C +G CP L+F+P + +CD NV
Sbjct: 567 IALDDFSCKHLADGNHASGLCKSVFYICANGQVVATTCPANLIFNP---YVGECDYSTNV 623
Query: 302 -DC 307
DC
Sbjct: 624 RDC 626
Score = 33.1 bits (72), Expect = 0.046
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 146 CPNKDGQYEDERQCDKFYECLDGVATTKICPDGLVFDPTIRKINKCDQ 289
CP+ DG Y K+ +C++ V + CP+GL FD R + +C++
Sbjct: 43 CPDGDGLYAVGCS-SKYLQCVNNVEYEQSCPEGLYFD---RLLARCER 86
Score = 31.9 bits (69), Expect = 0.11
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 122 ALASAQFKCPNK-DGQYEDERQCDKFYECLDGVATTKICPDGLVFD 256
A F C K +G+Y E F+ C DG A CP LVF+
Sbjct: 425 AEVKVDFDCTGKPNGKYIKEACTKSFFTCHDGRAFANDCPGDLVFN 470
Score = 30.3 bits (65), Expect = 0.32
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 158 DGQYEDERQCDK-FYECLDGVATTKICPDGLVFDPTIRKINKCDQPFNV-DC 307
D + D +C F++C +G K CP+ L++ + N CD P +V DC
Sbjct: 208 DMHFTDNVKCSPYFWQCSNGKLFRKTCPEKLIY---VLDQNLCDFPESVKDC 256
Score = 30.3 bits (65), Expect = 0.32
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 146 CPNKDGQYEDERQCDKFYECLDGVATTKICPDGLVFDPTI 265
C N+DG + + F C +GV C D LVFD +
Sbjct: 353 CKNRDGIFGIKECHASFLSCDNGVGRVIQCADNLVFDTRV 392
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 161 GQYE-DERQCDK-FYECLDGVATTKICPDGLVFDPTIRKINKCDQPFN 298
G Y D+ C++ +Y+C +G++ + CP V+ P ++ +CD N
Sbjct: 118 GDYALDKTVCNENYYQCANGISYMRKCPYQQVYVPILK---RCDYHTN 162
>Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical
protein C07G2.1b protein.
Length = 160
Score = 32.3 bits (70), Expect = 0.080
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +2
Query: 146 CPNK-DGQYEDERQCDKFYECLDGVATTKICPDGLVFDPTIRKINKCDQPFNV-DCG 310
C K DG Y +F C G++ CP L++DP +I C+ +NV CG
Sbjct: 61 CSTKEDGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDP---RIVACEYSYNVPQCG 114
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 32.3 bits (70), Expect = 0.080
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +2
Query: 146 CPNK-DGQYEDERQCDKFYECLDGVATTKICPDGLVFDPTIRKINKCDQPFNV-DCG 310
C K DG Y +F C G++ CP L++DP +I C+ +NV CG
Sbjct: 61 CSTKEDGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDP---RIVACEYSYNVPQCG 114
Score = 26.2 bits (55), Expect = 5.3
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 185 CDKFYE-CLDGVATTKICPDGLVFDPTIRKINKCDQ 289
C + Y+ C++G IC +GL F P + DQ
Sbjct: 537 CSQHYKNCVNGQEAIFICENGLFFSPEQARCAPADQ 572
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 32.3 bits (70), Expect = 0.080
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +2
Query: 146 CPNK-DGQYEDERQCDKFYECLDGVATTKICPDGLVFDPTIRKINKCDQPFNV-DCG 310
C K DG Y +F C G++ CP L++DP +I C+ +NV CG
Sbjct: 61 CSTKEDGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDP---RIVACEYSYNVPQCG 114
Score = 26.2 bits (55), Expect = 5.3
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 185 CDKFYE-CLDGVATTKICPDGLVFDPTIRKINKCDQ 289
C + Y+ C++G IC +GL F P + DQ
Sbjct: 537 CSQHYKNCVNGQEAIFICENGLFFSPEQARCAPADQ 572
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 31.5 bits (68), Expect = 0.14
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +2
Query: 146 CPNK-DGQYEDERQCDKFYECLDGVATTKICPDGLVFDPTIRKINKCDQPFNV 301
C K DG + + F C G+A CP LVF+PTI CD P +V
Sbjct: 247 CEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTIL---VCDWPRDV 296
Score = 29.9 bits (64), Expect = 0.43
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +2
Query: 119 AALASAQFKCPNKDGQYEDERQCDKFYECLDGVATTKICPDGLVF-DPTIRKINKCDQPF 295
A L + Q C +DG + + F C +G A CP GL F + T+R CD
Sbjct: 300 AGLPTPQPTC-EEDGYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVR----CDYES 354
Query: 296 NV 301
NV
Sbjct: 355 NV 356
Score = 27.9 bits (59), Expect = 1.7
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +2
Query: 101 IVLTAVAALASAQF--KCPNK-DGQYEDERQCDKFYECLDGVATTKICPDGLVFD 256
+ L A A A+ QF C N DG Y +F C G+A CP L+++
Sbjct: 7 LTLLAFATAANGQFLQDCTNALDGLYALGECEPQFLTCSGGIARIMDCPADLIYN 61
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 31.5 bits (68), Expect = 0.14
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +2
Query: 146 CPNK-DGQYEDERQCDKFYECLDGVATTKICPDGLVFDPTIRKINKCDQPFNV 301
C K DG + + F C G+A CP LVF+PTI CD P +V
Sbjct: 247 CEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTIL---VCDWPRDV 296
Score = 29.9 bits (64), Expect = 0.43
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +2
Query: 119 AALASAQFKCPNKDGQYEDERQCDKFYECLDGVATTKICPDGLVF-DPTIRKINKCDQPF 295
A L + Q C +DG + + F C +G A CP GL F + T+R CD
Sbjct: 300 AGLPTPQPTC-EEDGYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVR----CDYES 354
Query: 296 NV 301
NV
Sbjct: 355 NV 356
Score = 27.9 bits (59), Expect = 1.7
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +2
Query: 101 IVLTAVAALASAQF--KCPNK-DGQYEDERQCDKFYECLDGVATTKICPDGLVFD 256
+ L A A A+ QF C N DG Y +F C G+A CP L+++
Sbjct: 7 LTLLAFATAANGQFLQDCTNALDGLYALGECEPQFLTCSGGIARIMDCPADLIYN 61
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 30.7 bits (66), Expect = 0.24
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 153 TKMANTKTKGNATNSTSV*TASPPPRFAPTDLCSILPSGKSTSVTSPSTLTADT 314
T T+T T +T+ T +P PT + + KST+ T+ +T T T
Sbjct: 258 TPTTTTQTTTKPTTTTTTPTTTPTTTTTPTTTTTTAKTTKSTTTTTKTTKTTST 311
>U64601-10|AAP40523.1| 91|Caenorhabditis elegans Hypothetical
protein M03F4.7b protein.
Length = 91
Score = 29.9 bits (64), Expect = 0.43
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 95 VFIVLTAVAALASAQFKCPNKDGQYEDERQCDKFYE 202
+F+ L A ALAS P+KDG++ ++ DK Y+
Sbjct: 5 LFVGLLAATALASHHSSDPSKDGEHFKGKEHDKKYD 40
>U64601-9|AAB04578.1| 314|Caenorhabditis elegans Hypothetical
protein M03F4.7a protein.
Length = 314
Score = 29.9 bits (64), Expect = 0.43
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 95 VFIVLTAVAALASAQFKCPNKDGQYEDERQCDKFYE 202
+F+ L A ALAS P+KDG++ ++ DK Y+
Sbjct: 5 LFVGLLAATALASHHSSDPSKDGEHFKGKEHDKKYD 40
>AF228528-1|AAF34189.1| 314|Caenorhabditis elegans calumenin-like
protein protein.
Length = 314
Score = 29.9 bits (64), Expect = 0.43
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 95 VFIVLTAVAALASAQFKCPNKDGQYEDERQCDKFYE 202
+F+ L A ALAS P+KDG++ ++ DK Y+
Sbjct: 5 LFVGLLAATALASHHSSDPSKDGEHFKGKEHDKKYD 40
>Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 27.9 bits (59), Expect = 1.7
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 116 VAALASAQFKCPNKDGQYEDER-QCDKFYECLDGVATTK 229
V+ +S QF+C +DG+ D+ +C+ Y+C DG T+
Sbjct: 576 VSRCSSVQFEC-KRDGKCIDKALECNHKYDCEDGSDETE 613
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +2
Query: 137 QFKCPNKDGQ-YEDERQCDKFYECLDG 214
QFKC GQ E+ +C++ Y+C DG
Sbjct: 435 QFKCGT--GQCIEESLKCNRKYDCADG 459
>Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 27.9 bits (59), Expect = 1.7
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 116 VAALASAQFKCPNKDGQYEDER-QCDKFYECLDGVATTK 229
V+ +S QF+C +DG+ D+ +C+ Y+C DG T+
Sbjct: 576 VSRCSSVQFEC-KRDGKCIDKALECNHKYDCEDGSDETE 613
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +2
Query: 137 QFKCPNKDGQ-YEDERQCDKFYECLDG 214
QFKC GQ E+ +C++ Y+C DG
Sbjct: 435 QFKCGT--GQCIEESLKCNRKYDCADG 459
>Z81543-2|CAB04424.1| 309|Caenorhabditis elegans Hypothetical
protein F49B2.2 protein.
Length = 309
Score = 27.5 bits (58), Expect = 2.3
Identities = 10/32 (31%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 227 KICPDGLVFDPTIRKINKC-DQPFNVDCGHRT 319
++C DGL++D IR I+ + ++ C H +
Sbjct: 154 RLCTDGLLYDEVIRSISILKSEKLHITCNHNS 185
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 2.3
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 153 TKMANTKTKGNATNSTSV*TASPPPRFAPTDLCSILP-SGKSTSVTSPSTLTADT 314
T + +T T+ +T++T+ S T+ + L S STS T PST T T
Sbjct: 397 TMLTSTTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTSTVTT 451
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 2.3
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 153 TKMANTKTKGNATNSTSV*TASPPPRFAPTDLCSILP-SGKSTSVTSPSTLTADT 314
T + +T T+ +T++T+ S T+ + L S STS T PST T T
Sbjct: 397 TMLTSTTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTSTVTT 451
>U41992-3|AAL02507.1| 134|Caenorhabditis elegans Hypothetical
protein F32E10.8 protein.
Length = 134
Score = 27.1 bits (57), Expect = 3.0
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +2
Query: 140 FKCPNKDGQYEDERQCDKFYECLDGVATTKIC 235
F+C + R CDK+ +C DG + C
Sbjct: 90 FRCTDSSSCIAPNRVCDKYKDCRDGSDERENC 121
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 27.1 bits (57), Expect = 3.0
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 183 NATNSTSV*TASPPPRFAPTDLCSIL-PSGKSTS 281
NAT+ST+ T SP P PT ++L P+ K+ S
Sbjct: 316 NATSSTTSPTTSPTPEPEPTTTATVLAPTLKNLS 349
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 27.1 bits (57), Expect = 3.0
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 183 NATNSTSV*TASPPPRFAPTDLCSIL-PSGKSTS 281
NAT+ST+ T SP P PT ++L P+ K+ S
Sbjct: 298 NATSSTTSPTTSPTPEPEPTTTATVLAPTLKNLS 331
>Z71177-8|CAA94866.2| 525|Caenorhabditis elegans Hypothetical
protein AC3.2 protein.
Length = 525
Score = 26.6 bits (56), Expect = 4.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 202 LVEFVALPFVFVLAIFVRAFKLSAC 128
++ FV FV VL +F+ AFK C
Sbjct: 486 VIAFVLFVFVAVLHVFIYAFKFLCC 510
>U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily
assigned gene nameprotein 162 protein.
Length = 2643
Score = 26.6 bits (56), Expect = 4.0
Identities = 14/56 (25%), Positives = 21/56 (37%)
Frame = +2
Query: 116 VAALASAQFKCPNKDGQYEDERQCDKFYECLDGVATTKICPDGLVFDPTIRKINKC 283
VA + K P Y ++ CD F +C D C + + + K KC
Sbjct: 38 VAPMRECDAKSPGGPKCYPEQWYCDGFPDCQDSSDEPSTCKRTCLENEFVCKTGKC 93
>L15313-1|AAA28202.1| 305|Caenorhabditis elegans Hypothetical
protein ZK353.4 protein.
Length = 305
Score = 26.6 bits (56), Expect = 4.0
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 153 TKMANTKTKGNATNSTSV*TASPPPRF 233
TKMANT + N T SV SP F
Sbjct: 170 TKMANTSSSANRTGEISVEIVSPSKYF 196
>AL033508-3|CAA22054.1| 315|Caenorhabditis elegans Hypothetical
protein Y106G6G.4 protein.
Length = 315
Score = 26.6 bits (56), Expect = 4.0
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +3
Query: 165 NTKTKGNATNSTSV*TASPPPRFAPTDLCSILPSGKSTSVTSPSTLTADT 314
NT T ATNST + + PP T + +G +T VTS + LT T
Sbjct: 162 NTTTAPPATNSTQIISTLRPPLNRSTSSTDVKENG-TTHVTS-ANLTGTT 209
>AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical
protein Y54G2A.13 protein.
Length = 610
Score = 26.6 bits (56), Expect = 4.0
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +3
Query: 153 TKMANTKTKGNATNSTSV*TASPPPRFAPTDLCSILP--SGKSTSVTSPST 299
T + T T NAT V T +PPP T ++ P S + S T +T
Sbjct: 137 TPLTTTFTLENATTKEKVTTPTPPPPTTTTPTTTLKPTTSPEKHSTTEEAT 187
>Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical
protein W04G5.9 protein.
Length = 405
Score = 26.2 bits (55), Expect = 5.3
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 162 ANTKTKGNATNSTSV*TASPPPR-FAPTDLCSILPSGKSTSVTSPSTLTADT 314
A TK T ST+ T SPP P S +T+ TSPSTL T
Sbjct: 137 APTKASTARTISTTETTTSPPTTTVTPRTTRSSTARTVATTKTSPSTLRTTT 188
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 26.2 bits (55), Expect = 5.3
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Frame = +3
Query: 159 MANTKTKGNATNSTSV*TASPPPRFAPTDLCSILPS-----GKSTSVTSPSTLTADT 314
+AN K +T T+ TASP P D LP+ GKS+S ST D+
Sbjct: 146 LANGDGKPLSTEGTNTTTASPNGSLNPDDDDDGLPNVGDDDGKSSSANKTSTTAPDS 202
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 25.8 bits (54), Expect = 7.0
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 189 TNSTSV*TASPP-PRFAPTDLCSILPSGKSTSVTSPSTLTADT 314
T+ V T SP +PT L + PS TS T+P+ LT T
Sbjct: 608 TSKAPVVTTSPTLAPTSPTKLPTSPPSTVGTSPTAPANLTTPT 650
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 25.8 bits (54), Expect = 7.0
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 189 TNSTSV*TASPP-PRFAPTDLCSILPSGKSTSVTSPSTLTADT 314
T+ V T SP +PT L + PS TS T+P+ LT T
Sbjct: 664 TSKAPVVTTSPTLAPTSPTKLPTSPPSTVGTSPTAPANLTTPT 706
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 25.4 bits (53), Expect = 9.2
Identities = 9/36 (25%), Positives = 21/36 (58%)
Frame = +2
Query: 128 ASAQFKCPNKDGQYEDERQCDKFYECLDGVATTKIC 235
++ QF+C + + +D + CD+ ++C D + +C
Sbjct: 3188 SNGQFQCTSGEC-IDDAKVCDRNFDCTDRSDESSLC 3222
>U42830-2|AAC48274.1| 243|Caenorhabditis elegans Hypothetical
protein C53B7.3 protein.
Length = 243
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = +2
Query: 98 FIVLTAVAALASAQFKCPNKDGQYEDERQCDKFYECLDG 214
F +L A+ LASA + R C YEC G
Sbjct: 3 FTILLALFGLASAATYYSSTPSYSNSYRSCSSSYECSSG 41
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 25.4 bits (53), Expect = 9.2
Identities = 9/36 (25%), Positives = 21/36 (58%)
Frame = +2
Query: 128 ASAQFKCPNKDGQYEDERQCDKFYECLDGVATTKIC 235
++ QF+C + + +D + CD+ ++C D + +C
Sbjct: 3188 SNGQFQCTSGEC-IDDAKVCDRNFDCTDRSDESSLC 3222
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,951,357
Number of Sequences: 27780
Number of extensions: 101347
Number of successful extensions: 453
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 452
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 376873630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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