Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_E20
(293 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z32681-6|CAA83605.1| 257|Caenorhabditis elegans Hypothetical pr... 117 2e-27
AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical... 30 0.25
U50191-6|AAK31554.2| 235|Caenorhabditis elegans Hypothetical pr... 29 0.76
Z29115-6|CAA82365.2| 1374|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z29115-5|CAA82366.2| 1368|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z19153-7|CAA79550.2| 1374|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z19153-6|CAA79551.2| 1368|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical pr... 27 3.1
Z73103-9|CAJ43433.1| 719|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z73103-8|CAA97429.1| 721|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical p... 25 9.4
U39648-8|AAK39291.1| 270|Caenorhabditis elegans Beta carbonic a... 25 9.4
U39648-7|AAM15604.1| 429|Caenorhabditis elegans Beta carbonic a... 25 9.4
>Z32681-6|CAA83605.1| 257|Caenorhabditis elegans Hypothetical
protein F56F3.5 protein.
Length = 257
Score = 117 bits (281), Expect = 2e-27
Identities = 55/73 (75%), Positives = 64/73 (87%)
Frame = +3
Query: 75 VDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDAE 254
VDPF+RK+WYD+KAP+MF RQVG TL+NRTQGTKIASEGLKGRVFEVSL DL +++E
Sbjct: 20 VDPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVFEVSLGDL---NNSE 76
Query: 255 RSFRKFRLIAEDV 293
FRKF+LIAEDV
Sbjct: 77 ADFRKFKLIAEDV 89
>AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical
protein Y66D12A.14 protein.
Length = 2870
Score = 30.3 bits (65), Expect = 0.25
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -2
Query: 217 TSKTRPFRPSDAIFVPWVRLTRVVPTCLLVNMDGA 113
TSK +P R D I V R T CL V GA
Sbjct: 2175 TSKAQPIRSDDVISVAGTRSTETTMKCLAVQFTGA 2209
>U50191-6|AAK31554.2| 235|Caenorhabditis elegans Hypothetical
protein T14B4.8 protein.
Length = 235
Score = 28.7 bits (61), Expect = 0.76
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -2
Query: 184 AIFVPWVRLTRVVPTCLLVNMDGALTSYQSLRVKG 80
+ F+P++R R VPT +++ +G + Y +L G
Sbjct: 119 SFFIPFLRPRRTVPTFSIIDWNGEVLGYYALASDG 153
>Z29115-6|CAA82365.2| 1374|Caenorhabditis elegans Hypothetical
protein C38C10.5b protein.
Length = 1374
Score = 27.5 bits (58), Expect = 1.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 115 RRPCSPRDKWAPPLSIAPREQKL 183
R P ++ + PP I PREQKL
Sbjct: 86 RMPSKIKEAFIPPAKITPREQKL 108
>Z29115-5|CAA82366.2| 1368|Caenorhabditis elegans Hypothetical
protein C38C10.5a protein.
Length = 1368
Score = 27.5 bits (58), Expect = 1.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 115 RRPCSPRDKWAPPLSIAPREQKL 183
R P ++ + PP I PREQKL
Sbjct: 86 RMPSKIKEAFIPPAKITPREQKL 108
>Z19153-7|CAA79550.2| 1374|Caenorhabditis elegans Hypothetical
protein C38C10.5b protein.
Length = 1374
Score = 27.5 bits (58), Expect = 1.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 115 RRPCSPRDKWAPPLSIAPREQKL 183
R P ++ + PP I PREQKL
Sbjct: 86 RMPSKIKEAFIPPAKITPREQKL 108
>Z19153-6|CAA79551.2| 1368|Caenorhabditis elegans Hypothetical
protein C38C10.5a protein.
Length = 1368
Score = 27.5 bits (58), Expect = 1.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 115 RRPCSPRDKWAPPLSIAPREQKL 183
R P ++ + PP I PREQKL
Sbjct: 86 RMPSKIKEAFIPPAKITPREQKL 108
>Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical
protein E01G4.4 protein.
Length = 534
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 255 FPHHYQPGDQQGRPQKHAPLDPQMQ 181
+ ++ Q QQGRPQ++A PQ Q
Sbjct: 34 YGYNNQQQQQQGRPQQYAGYPPQRQ 58
>Z73103-9|CAJ43433.1| 719|Caenorhabditis elegans Hypothetical
protein C08F8.2b protein.
Length = 719
Score = 25.0 bits (52), Expect = 9.4
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 170 LGAIDKGGAHLSLGEHGRRFNIVPVFTGERINNLLLNTLLASFRK 36
+G++D H+SL E RR + + IN+ L SFR+
Sbjct: 70 IGSLDNTNIHMSLDEFMRRPMVRQLAKENGINDKLFMRSFKSFRE 114
>Z73103-8|CAA97429.1| 721|Caenorhabditis elegans Hypothetical
protein C08F8.2a protein.
Length = 721
Score = 25.0 bits (52), Expect = 9.4
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 170 LGAIDKGGAHLSLGEHGRRFNIVPVFTGERINNLLLNTLLASFRK 36
+G++D H+SL E RR + + IN+ L SFR+
Sbjct: 72 IGSLDNTNIHMSLDEFMRRPMVRQLAKENGINDKLFMRSFKSFRE 116
>Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical
protein K08F4.2 protein.
Length = 473
Score = 25.0 bits (52), Expect = 9.4
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -3
Query: 261 KTFPHHYQPGDQQGRPQKHAPLDPQMQFLFP 169
+T HH QP Q + HAPL Q + P
Sbjct: 278 QTQMHHMQPSMHQQQQGSHAPLYQQQRQSHP 308
>U39648-8|AAK39291.1| 270|Caenorhabditis elegans Beta carbonic
anhydrase protein1, isoform a protein.
Length = 270
Score = 25.0 bits (52), Expect = 9.4
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +3
Query: 117 PSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSL 224
P+ FT+ QVG V R G I G EVS+
Sbjct: 46 PTRFTQSQVGDMFVVRNAGNMIPDAPNYGAFSEVSV 81
>U39648-7|AAM15604.1| 429|Caenorhabditis elegans Beta carbonic
anhydrase protein1, isoform b protein.
Length = 429
Score = 25.0 bits (52), Expect = 9.4
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +3
Query: 117 PSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSL 224
P+ FT+ QVG V R G I G EVS+
Sbjct: 205 PTRFTQSQVGDMFVVRNAGNMIPDAPNYGAFSEVSV 240
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,248,727
Number of Sequences: 27780
Number of extensions: 120859
Number of successful extensions: 284
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 283
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 291481146
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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