Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_E13
         (179 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC004544-1|AAH04544.2|  278|Homo sapiens CYHR1 protein protein.        47   9e-06
AK160381-1|BAD18724.1|  289|Homo sapiens FLJ00352 protein protein.     47   9e-06

>BC004544-1|AAH04544.2|  278|Homo sapiens CYHR1 protein protein.
          Length = 278

 Score = 47.2 bits (107), Expect = 9e-06
 Identities = 19/41 (46%), Positives = 29/41 (70%)
 Frame = +3

Query: 12  KLYYESSRFPAFAQQWVVKAYVNKNQRDPTQSTDRTITYQV 134
           +LYYE+ RF    Q WV+KA VN ++R+P  S  RT+++Q+
Sbjct: 163 RLYYETPRFTVLNQTWVLKARVNDSERNPNLSCKRTLSFQL 203


>AK160381-1|BAD18724.1|  289|Homo sapiens FLJ00352 protein protein.
          Length = 289

 Score = 47.2 bits (107), Expect = 9e-06
 Identities = 19/41 (46%), Positives = 29/41 (70%)
 Frame = +3

Query: 12  KLYYESSRFPAFAQQWVVKAYVNKNQRDPTQSTDRTITYQV 134
           +LYYE+ RF    Q WV+KA VN ++R+P  S  RT+++Q+
Sbjct: 174 RLYYETPRFTVLNQTWVLKARVNDSERNPNLSCKRTLSFQL 214


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,716,535
Number of Sequences: 237096
Number of extensions: 409996
Number of successful extensions: 1339
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1339
length of database: 76,859,062
effective HSP length: 39
effective length of database: 67,612,318
effective search space used: 1352246360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)