Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_E13
(179 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 26 0.048
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 20 2.4
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 20 2.4
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 20 3.1
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 19 4.1
AF134820-1|AAD40235.1| 166|Apis mellifera putative Ets-family p... 19 4.1
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 19 7.2
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 19 7.2
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 19 7.2
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 19 7.2
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 19 7.2
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 19 7.2
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 18 9.6
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 25.8 bits (54), Expect = 0.048
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 163 TAGHTLRTHATWYVMVRSVLCVGSRWFLFTYAFTTHCW 50
T+G RTH Y+++ +L + FL + +T H W
Sbjct: 146 TSGIVGRTHTVGYIIIGFLLAGIVQPFLIHWIWTPHGW 183
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 20.2 bits (40), Expect = 2.4
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = -2
Query: 73 YAFTTHCWA 47
Y T HCWA
Sbjct: 253 YKSTLHCWA 261
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 20.2 bits (40), Expect = 2.4
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = -2
Query: 73 YAFTTHCWA 47
Y T HCWA
Sbjct: 253 YKSTLHCWA 261
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -1
Query: 62 DPLLGERWEPRRLVV 18
DPL RW RR+ V
Sbjct: 129 DPLRYGRWVTRRIAV 143
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 19.4 bits (38), Expect = 4.1
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +3
Query: 33 RFPAFAQQWVVKAYVNKNQRDPTQSTDRTITYQVACVR 146
RF FA+ V D T +TD ++ V+ VR
Sbjct: 389 RFQVFAENGVSALAGKSEYVDITVTTDASVPSLVSNVR 426
>AF134820-1|AAD40235.1| 166|Apis mellifera putative Ets-family
protein protein.
Length = 166
Score = 19.4 bits (38), Expect = 4.1
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 167 EHSGAHAADTRYLVRDG 117
EH AA +YL+R G
Sbjct: 53 EHDPGLAAVLQYLIRSG 69
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 18.6 bits (36), Expect = 7.2
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -2
Query: 127 YVMVRSVLCVGSRWFLFTYAF 65
Y M+ S+ GS W + AF
Sbjct: 128 YAMLGSLFGCGSIWTMTMIAF 148
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 18.6 bits (36), Expect = 7.2
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +2
Query: 95 PDAEHGPD 118
PD+EHG D
Sbjct: 542 PDSEHGYD 549
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 18.6 bits (36), Expect = 7.2
Identities = 6/12 (50%), Positives = 6/12 (50%)
Frame = -2
Query: 91 RWFLFTYAFTTH 56
RW TY T H
Sbjct: 60 RWIRLTYGQTNH 71
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 18.6 bits (36), Expect = 7.2
Identities = 6/12 (50%), Positives = 6/12 (50%)
Frame = -2
Query: 91 RWFLFTYAFTTH 56
RW TY T H
Sbjct: 98 RWIRLTYGQTNH 109
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 18.6 bits (36), Expect = 7.2
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -2
Query: 127 YVMVRSVLCVGSRWFLFTYAF 65
Y M+ S+ GS W + AF
Sbjct: 94 YAMLGSLFGCGSIWTMTMIAF 114
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 18.6 bits (36), Expect = 7.2
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -2
Query: 127 YVMVRSVLCVGSRWFLFTYAF 65
Y M+ S+ GS W + AF
Sbjct: 4 YAMLGSLFGCGSIWTMTMIAF 24
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 18.2 bits (35), Expect = 9.6
Identities = 5/12 (41%), Positives = 9/12 (75%)
Frame = -2
Query: 163 TAGHTLRTHATW 128
T ++R+H+TW
Sbjct: 1671 TVIRSIRSHSTW 1682
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,852
Number of Sequences: 438
Number of extensions: 658
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 39
effective length of database: 129,261
effective search space used: 2585220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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