Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_E06
         (203 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    22   3.0  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    22   3.0  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    21   7.0  

>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -2

Query: 172 ATVVSLAFPYSLCYFNVLKFSTDTR 98
           A V  + F  ++C+ NV+ +S+  R
Sbjct: 323 AAVTQVFFSLTICFGNVMMYSSYNR 347


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -2

Query: 172 ATVVSLAFPYSLCYFNVLKFSTDTR 98
           A V  + F  ++C+ NV+ +S+  R
Sbjct: 323 AAVTQVFFSLTICFGNVMMYSSYNR 347


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = -2

Query: 199 VYPYRRCAPATVVSLAFPYSLCYFNVLKFS 110
           V P+ +       + A PYS CY     FS
Sbjct: 25  VGPFTQLPVTPPGAAALPYSACYVGNYLFS 54


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,923
Number of Sequences: 2352
Number of extensions: 3530
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 45
effective length of database: 458,139
effective search space used: 10079058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)