Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_E05
         (177 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   0.78 
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   1.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    19   7.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    19   7.3  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    18   9.6  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    18   9.6  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    18   9.6  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    18   9.6  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    18   9.6  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    18   9.6  

>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 0.78
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 93  IDESTVTYSVNSTDLQKWK 149
           IDE+++TY+ +    Q WK
Sbjct: 75  IDENSMTYAADIFFAQTWK 93


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 93  IDESTVTYSVNSTDLQKW 146
           ID+ T+ YSV  T  ++W
Sbjct: 73  IDDVTMEYSVQLTFREQW 90


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = -2

Query: 77  ELNHQAWVSKQKETIDTRASCRYSD 3
           E++  +W+   +   D   SCR +D
Sbjct: 256 EVDQLSWLGSGQYISDFVGSCRKTD 280


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = -2

Query: 77  ELNHQAWVSKQKETIDTRASCRYSD 3
           E++  +W+   +   D   SCR +D
Sbjct: 294 EVDQLSWLGSGQYISDFVGSCRKTD 318


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +3

Query: 96  DESTVTYSVNSTDLQKW 146
           DES++ Y V     Q+W
Sbjct: 101 DESSLKYEVEFLLQQQW 117


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +3

Query: 96  DESTVTYSVNSTDLQKW 146
           DES++ Y V     Q+W
Sbjct: 101 DESSLKYEVEFLLQQQW 117


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +3

Query: 96  DESTVTYSVNSTDLQKW 146
           DES++ Y V     Q+W
Sbjct: 152 DESSLKYEVEFLLQQQW 168


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +3

Query: 96  DESTVTYSVNSTDLQKW 146
           DES++ Y V     Q+W
Sbjct: 101 DESSLKYEVEFLLQQQW 117


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 90  FIDESTVTYSVNS 128
           F+D+STV  S N+
Sbjct: 328 FVDQSTVFLSWNA 340


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +2

Query: 53  KPKLGDLVP 79
           KP LGD+ P
Sbjct: 382 KPNLGDIKP 390


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,290
Number of Sequences: 438
Number of extensions: 941
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 38
effective length of database: 129,699
effective search space used:  2593980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)