Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_D24
         (184 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   1.0  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   1.4  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   1.8  
AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.      21   1.8  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    20   2.4  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    19   4.1  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    19   5.5  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    19   7.2  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    19   7.2  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    19   7.2  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    19   7.2  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        19   7.2  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        19   7.2  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        19   7.2  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    18   9.5  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    18   9.5  

>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 1.0
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +3

Query: 141 EQFSLCWNNFHANM 182
           + + L WNN+ +NM
Sbjct: 9   QHYCLRWNNYQSNM 22


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = +1

Query: 115 QSPPSWRRTNNSHYVGTIST 174
           ++P +      +HY+GT++T
Sbjct: 160 ETPKNTSAVRYTHYIGTLAT 179


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +3

Query: 129 MASDEQFSLCWNNFHANM 182
           M   + F L WNN+ +++
Sbjct: 1   MVDTQHFCLRWNNYQSSI 18


>AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.
          Length = 39

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +3

Query: 129 MASDEQFSLCWNNFHANM 182
           M   + F L WNN+ +++
Sbjct: 1   MVDTQHFCLRWNNYQSSI 18


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +3

Query: 147 FSLCWNNFHA 176
           F +CW  FHA
Sbjct: 294 FFICWAPFHA 303


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +1

Query: 127 SWRRTNNSHY 156
           SWR TNN  Y
Sbjct: 218 SWRITNNLFY 227


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +3

Query: 39  TNIFIYLSNVSNIGIIEYK 95
           TN  +Y+++    G+I Y+
Sbjct: 202 TNTMVYIADEKGEGLIMYQ 220


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 5/9 (55%), Positives = 6/9 (66%)
 Frame = +3

Query: 147 FSLCWNNFH 173
           F +CW  FH
Sbjct: 269 FFICWAPFH 277


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 5/9 (55%), Positives = 6/9 (66%)
 Frame = +3

Query: 147 FSLCWNNFH 173
           F +CW  FH
Sbjct: 279 FFICWAPFH 287


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -1

Query: 154 NENCSSDAMMAATVGTLS*ALYSII 80
           N N   DA++  TV + +  L  I+
Sbjct: 308 NNNVYKDALIVCTVNSCTSMLSGIV 332


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -1

Query: 154 NENCSSDAMMAATVGTLS*ALYSII 80
           N N   DA++  TV + +  L  I+
Sbjct: 361 NNNVYKDALIVCTVNSCTSMLSGIV 385


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 123 RRLWEPYPKLCTL 85
           RRL E Y  +C L
Sbjct: 209 RRLKETYSNMCAL 221


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 123 RRLWEPYPKLCTL 85
           RRL E Y  +C L
Sbjct: 209 RRLKETYSNMCAL 221


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 123 RRLWEPYPKLCTL 85
           RRL E Y  +C L
Sbjct: 209 RRLKETYSNMCAL 221


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +2

Query: 29  PVRNKYFYLPI 61
           P +N Y +LP+
Sbjct: 823 PQQNPYMFLPV 833


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +3

Query: 57  LSNVSNIGIIEYKA 98
           +SN   +G+ EY+A
Sbjct: 324 ISNKRRLGLTEYQA 337


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,401
Number of Sequences: 438
Number of extensions: 1383
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 40
effective length of database: 128,823
effective search space used:  2576460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)