Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_D23
(253 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 111 6e-26
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 111 6e-26
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 111 8e-26
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 109 4e-25
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 109 4e-25
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 106 2e-24
03_01_0034 + 318432-318825,318902-319851 105 7e-24
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 102 3e-23
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 48 8e-07
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 48 8e-07
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 45 7e-06
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 42 5e-05
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 39 5e-04
07_01_1133 - 10550799-10551137,10552195-10552254,10555693-105574... 32 0.074
11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591 31 0.097
10_01_0300 - 3257584-3258825 30 0.22
11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644 29 0.39
08_02_0235 + 14627648-14628889 29 0.39
08_01_0749 + 7063297-7064370 29 0.39
07_01_1086 - 9930311-9931993 29 0.39
05_03_0216 + 10370531-10371922,10378656-10378808 29 0.39
04_01_0187 - 2153546-2154520,2154581-2155858 29 0.39
12_02_0931 + 24512496-24512567,24512705-24512806,24512939-245129... 29 0.69
03_02_0319 - 7421357-7421757,7421768-7421843,7424695-7424796,742... 29 0.69
10_07_0032 + 12096290-12097042,12097056-12098066,12110194-12110454 28 0.91
10_04_0010 - 7487455-7489490,7489569-7489980 28 0.91
03_02_1029 - 13488535-13493037 28 0.91
07_03_0689 + 20711313-20711906,20713224-20713860,20713946-20714049 27 1.6
02_04_0648 - 24716249-24717841 27 1.6
06_01_0893 - 6834350-6834464,6835042-6835218,6835301-6835350,683... 27 2.1
05_01_0158 - 1067721-1067827,1067951-1068008,1068276-1068334,106... 27 2.1
07_03_1330 + 25848372-25849157 27 2.8
10_05_0013 + 7986281-7986434,7986664-7986743,7987583-7987656,798... 26 3.7
08_01_0820 - 7957563-7957646,7958036-7958134,7958233-7959729 26 4.8
02_05_0027 - 25172106-25172618 26 4.8
11_02_0049 - 7751779-7751925,7752046-7752189,7752398-7752489,775... 25 6.4
01_04_0116 + 16189250-16189411,16189577-16190104 25 6.4
01_01_0430 + 3258438-3259200,3259929-3261454 25 6.4
07_03_1690 - 28716998-28717091,28717203-28717897,28718264-287184... 25 8.4
07_03_0104 + 13434954-13435145,13436220-13436288,13436386-134365... 25 8.4
07_01_0253 + 1888831-1889399,1890121-1890526,1890980-1891195,189... 25 8.4
06_03_0232 - 18507872-18508792 25 8.4
05_04_0357 + 20602830-20602848,20604210-20604250,20605770-206065... 25 8.4
02_01_0792 + 5935644-5935861,5936892-5936940 25 8.4
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 111 bits (268), Expect = 6e-26
Identities = 49/57 (85%), Positives = 51/57 (89%)
Frame = +3
Query: 81 MREIVHIQAGQCGNQIGAKFWEISSDEHGIDPTGAYHGDSDLQLERINVYYNEASGG 251
MREI+HIQ GQCGNQIGAKFWE+ DEHGID TG Y GDSDLQLERINVYYNEASGG
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGG 57
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 111 bits (268), Expect = 6e-26
Identities = 49/57 (85%), Positives = 51/57 (89%)
Frame = +3
Query: 81 MREIVHIQAGQCGNQIGAKFWEISSDEHGIDPTGAYHGDSDLQLERINVYYNEASGG 251
MREI+HIQ GQCGNQIGAKFWE+ DEHGID TG Y GDSDLQLERINVYYNEASGG
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGG 57
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 111 bits (267), Expect = 8e-26
Identities = 48/57 (84%), Positives = 51/57 (89%)
Frame = +3
Query: 81 MREIVHIQAGQCGNQIGAKFWEISSDEHGIDPTGAYHGDSDLQLERINVYYNEASGG 251
MREI+HIQ GQCGNQIGAKFWE+ DEHG+D TG Y GDSDLQLERINVYYNEASGG
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEASGG 57
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 109 bits (261), Expect = 4e-25
Identities = 47/58 (81%), Positives = 51/58 (87%)
Frame = +3
Query: 78 KMREIVHIQAGQCGNQIGAKFWEISSDEHGIDPTGAYHGDSDLQLERINVYYNEASGG 251
KMREI+HIQ GQCGNQIG+KFWE+ DEHGIDPTG Y G SDLQLER+NVYYNEAS G
Sbjct: 180 KMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCG 237
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 109 bits (261), Expect = 4e-25
Identities = 47/57 (82%), Positives = 51/57 (89%)
Frame = +3
Query: 81 MREIVHIQAGQCGNQIGAKFWEISSDEHGIDPTGAYHGDSDLQLERINVYYNEASGG 251
MREI+HIQ GQCGNQIGAKFWE+ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCG 57
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 106 bits (255), Expect = 2e-24
Identities = 46/57 (80%), Positives = 50/57 (87%)
Frame = +3
Query: 81 MREIVHIQAGQCGNQIGAKFWEISSDEHGIDPTGAYHGDSDLQLERINVYYNEASGG 251
MREI+HIQ GQCGNQIG+KFWE+ DEHGIDPTG Y G SDLQLER+NVYYNEAS G
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCG 57
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 105 bits (251), Expect = 7e-24
Identities = 46/57 (80%), Positives = 49/57 (85%)
Frame = +3
Query: 81 MREIVHIQAGQCGNQIGAKFWEISSDEHGIDPTGAYHGDSDLQLERINVYYNEASGG 251
MREI+HIQ GQCGNQIGAKFWE+ EHGID TG Y GDSDLQLER+NVYYNEAS G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQLERVNVYYNEASCG 57
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 102 bits (245), Expect = 3e-23
Identities = 44/57 (77%), Positives = 48/57 (84%)
Frame = +3
Query: 81 MREIVHIQAGQCGNQIGAKFWEISSDEHGIDPTGAYHGDSDLQLERINVYYNEASGG 251
MREI+HIQ GQCGNQIGAKFWE+ EHG+DPTG Y G S QLERINVY+NEASGG
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLERINVYFNEASGG 57
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 48.4 bits (110), Expect = 8e-07
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +3
Query: 81 MREIVHIQAGQCGNQIGAKFWEISSDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGG 251
MREI+ I GQ G Q+G WE+ EHGI+P G D+ + + + N +++E G
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAG 59
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 48.4 bits (110), Expect = 8e-07
Identities = 23/53 (43%), Positives = 32/53 (60%)
Frame = +3
Query: 84 REIVHIQAGQCGNQIGAKFWEISSDEHGIDPTGAYHGDSDLQLERINVYYNEA 242
REI+ IQ GQCGNQIG +FW+ EHGI G + +R +V++ +A
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQA 55
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 45.2 bits (102), Expect = 7e-06
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 81 MREIVHIQAGQCGNQIGAKFWEISSDEHGIDPTGAYHGDSDL--QLERINVYYNEASGG 251
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E G
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAG 59
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 42.3 bits (95), Expect = 5e-05
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = +3
Query: 81 MREIVHIQAGQCGNQIGAKFWEISSDEHGIDPTGAYHGDS 200
MREI+ I GQ G Q+G WE+ EHGI P G D+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRDA 40
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 39.1 bits (87), Expect = 5e-04
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +3
Query: 81 MREIVHIQAGQCGNQIGAKFWEISSDEHGIDPTGAYHGDSDL--QLERINVYYNEASGG 251
MRE + I GQ G Q+G WE+ EHGI G D + + N +++E G
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAG 59
>07_01_1133 -
10550799-10551137,10552195-10552254,10555693-10557401,
10557534-10557616,10577533-10578074
Length = 910
Score = 31.9 bits (69), Expect = 0.074
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 117 GNQIGAKFWEISSDEHG--IDPTGAYHGDSDLQLERIN 224
G+Q +KFW+ +E G ++ + AYH +D Q ER+N
Sbjct: 540 GSQFTSKFWQKLQEEMGTHLNFSTAYHPQTDGQTERVN 577
>11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591
Length = 573
Score = 31.5 bits (68), Expect = 0.097
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 117 GNQIGAKFWEISSDEHG--IDPTGAYHGDSDLQLERIN 224
G+Q +KFW+ +E G ++ + AYH +D Q ER+N
Sbjct: 331 GSQFTSKFWQKLQEELGTRLNFSTAYHPQTDGQTERVN 368
>10_01_0300 - 3257584-3258825
Length = 413
Score = 30.3 bits (65), Expect = 0.22
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 117 GNQIGAKFWEISSDEHG--IDPTGAYHGDSDLQLERIN 224
G+Q + FW+ +E G ++ + AYH +D Q ER+N
Sbjct: 121 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDRQTERVN 158
>11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644
Length = 581
Score = 29.5 bits (63), Expect = 0.39
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 117 GNQIGAKFWEISSDEHG--IDPTGAYHGDSDLQLERIN 224
G+Q + FW+ +E G ++ + AYH +D Q ER+N
Sbjct: 289 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 326
>08_02_0235 + 14627648-14628889
Length = 413
Score = 29.5 bits (63), Expect = 0.39
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 117 GNQIGAKFWEISSDEHG--IDPTGAYHGDSDLQLERIN 224
G+Q + FW+ +E G ++ + AYH +D Q ER+N
Sbjct: 121 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 158
>08_01_0749 + 7063297-7064370
Length = 357
Score = 29.5 bits (63), Expect = 0.39
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 117 GNQIGAKFWEISSDEHG--IDPTGAYHGDSDLQLERIN 224
G+Q +KFW+ E G ++ + AYH +D Q ER+N
Sbjct: 65 GSQFTSKFWQKLQLEMGTRLNFSTAYHPQTDGQTERVN 102
>07_01_1086 - 9930311-9931993
Length = 560
Score = 29.5 bits (63), Expect = 0.39
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 117 GNQIGAKFWEISSDEHG--IDPTGAYHGDSDLQLERIN 224
G+Q + FW+ +E G ++ + AYH +D Q ER+N
Sbjct: 268 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 305
>05_03_0216 + 10370531-10371922,10378656-10378808
Length = 514
Score = 29.5 bits (63), Expect = 0.39
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 117 GNQIGAKFWEISSDEHG--IDPTGAYHGDSDLQLERIN 224
G+Q + FW+ +E G ++ + AYH +D Q ER+N
Sbjct: 254 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 291
>04_01_0187 - 2153546-2154520,2154581-2155858
Length = 750
Score = 29.5 bits (63), Expect = 0.39
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 117 GNQIGAKFWEISSDEHG--IDPTGAYHGDSDLQLERIN 224
G+Q + FW+ +E G ++ + AYH +D Q ER+N
Sbjct: 504 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 541
>12_02_0931 +
24512496-24512567,24512705-24512806,24512939-24512984,
24513292-24513355,24513997-24514348,24514497-24514749,
24515069-24515311,24515399-24515518,24515710-24516158
Length = 566
Score = 28.7 bits (61), Expect = 0.69
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 81 MREIVHIQAGQCGNQIGAKFWEISSDEHGI 170
MRE V +Q G N +G+ FW + G+
Sbjct: 1 MREAVTVQVGGFANYVGSHFWNFQDELLGL 30
>03_02_0319 -
7421357-7421757,7421768-7421843,7424695-7424796,
7424911-7424982
Length = 216
Score = 28.7 bits (61), Expect = 0.69
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 81 MREIVHIQAGQCGNQIGAKFWEISSDEHGI 170
MRE V +Q G N +G+ FW + G+
Sbjct: 1 MREAVTVQVGGFANYVGSHFWNFQDELLGL 30
>10_07_0032 + 12096290-12097042,12097056-12098066,12110194-12110454
Length = 674
Score = 28.3 bits (60), Expect = 0.91
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 117 GNQIGAKFWEISSDEHG--IDPTGAYHGDSDLQLERIN 224
G+Q + FW+ +E G ++ + AYH +D Q ER+N
Sbjct: 406 GSQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLN 443
>10_04_0010 - 7487455-7489490,7489569-7489980
Length = 815
Score = 28.3 bits (60), Expect = 0.91
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 117 GNQIGAKFWEISSDEHG--IDPTGAYHGDSDLQLERIN 224
G+Q + FW+ +E G ++ + AYH +D Q ER+N
Sbjct: 568 GSQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLN 605
>03_02_1029 - 13488535-13493037
Length = 1500
Score = 28.3 bits (60), Expect = 0.91
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 117 GNQIGAKFWEISSDEHG--IDPTGAYHGDSDLQLERIN 224
G+Q + FW+ +E G ++ + AYH +D Q ER+N
Sbjct: 1208 GSQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLN 1245
>07_03_0689 + 20711313-20711906,20713224-20713860,20713946-20714049
Length = 444
Score = 27.5 bits (58), Expect = 1.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 207 ASLSRRGTHRWGRCRAHRS 151
A L HRW R RAHRS
Sbjct: 80 AQLGSSQLHRWSRARAHRS 98
>02_04_0648 - 24716249-24717841
Length = 530
Score = 27.5 bits (58), Expect = 1.6
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +3
Query: 129 GAKFWEISSDEHGIDPTGAYHG 194
G +++E+ DEHGI+P ++G
Sbjct: 366 GLRYFELMCDEHGIEPEIEHYG 387
>06_01_0893 -
6834350-6834464,6835042-6835218,6835301-6835350,
6836348-6836416,6836495-6836593,6836681-6836759,
6837604-6837704,6838645-6838713,6839548-6839588,
6839793-6841159,6841472-6841575,6841914-6842351,
6843040-6843567
Length = 1078
Score = 27.1 bits (57), Expect = 2.1
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 96 HIQAGQCGNQIGAKFWEISSDEHG 167
H+ C Q+G+ F E+SS +G
Sbjct: 392 HVNKDDCNTQLGSSFSEVSSSMYG 415
>05_01_0158 -
1067721-1067827,1067951-1068008,1068276-1068334,
1069009-1069087,1069177-1069233,1069531-1069580,
1069805-1069886,1070431-1070487,1070741-1070828,
1071171-1071247,1071325-1071443,1071719-1071950
Length = 354
Score = 27.1 bits (57), Expect = 2.1
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +1
Query: 100 SRPDNAETRLELSSGRSAPMSTASTPPVRTTATQTCSWSASMCITMR 240
+R + E L LSS AP +STPPVRTT ++ ++ IT +
Sbjct: 64 ARGADQEDGLSLSSEIEAP---SSTPPVRTTDKESTKPASETGITKK 107
>07_03_1330 + 25848372-25849157
Length = 261
Score = 26.6 bits (56), Expect = 2.8
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 106 PDNAETRLELSSGRSAPMSTASTPPVRTTATQTCSWSASMCITMR 240
PD ETR+ L ++ ++ S P T++ T S SAS T R
Sbjct: 211 PDAEETRVNLIPANTSATASTSRPSTSTSSPST-STSASHSATRR 254
>10_05_0013 +
7986281-7986434,7986664-7986743,7987583-7987656,
7988186-7988252
Length = 124
Score = 26.2 bits (55), Expect = 3.7
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 152 LR*ARHRPHRCVPRRLRL 205
+R +R PHRC+PRR L
Sbjct: 18 VRLSRRCPHRCIPRRAYL 35
>08_01_0820 - 7957563-7957646,7958036-7958134,7958233-7959729
Length = 559
Score = 25.8 bits (54), Expect = 4.8
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +3
Query: 117 GNQIGAKFWEISSDEHGIDP--TGAYHGDSDL 206
G Q+G+ + S DE I+P GAY DS L
Sbjct: 417 GQQLGSSSDDFSEDERNINPDVDGAYAFDSHL 448
>02_05_0027 - 25172106-25172618
Length = 170
Score = 25.8 bits (54), Expect = 4.8
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 95 AHPGRTMRKPDWS*VLGDQLR 157
AH + PDWS +LGD+ R
Sbjct: 83 AHGSLPVNIPDWSKILGDEYR 103
>11_02_0049 -
7751779-7751925,7752046-7752189,7752398-7752489,
7752745-7752811,7753148-7753264,7753318-7753462,
7753574-7753689,7753789-7753865,7753995-7754076,
7754180-7754317,7754781-7754999
Length = 447
Score = 25.4 bits (53), Expect = 6.4
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 117 GNQIGAKFWEISSDEHGIDPTGAYHG 194
G +IGA E S++H ID HG
Sbjct: 4 GQEIGASAGEKGSEQHAIDVRPGEHG 29
>01_04_0116 + 16189250-16189411,16189577-16190104
Length = 229
Score = 25.4 bits (53), Expect = 6.4
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +1
Query: 103 RPDNAETRLELSSGRSAPMSTASTPPVRTTATQTCSWSASMCITMRP 243
R A TR S RS P +S R+T+++ CS + S+C T P
Sbjct: 71 RDHGASTRSSTVS-RSPPTLRSSLEE-RSTSSRRCSGTTSLCPTHTP 115
>01_01_0430 + 3258438-3259200,3259929-3261454
Length = 762
Score = 25.4 bits (53), Expect = 6.4
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +1
Query: 40 ILVLSNLFSSDISK*GKSCTSRPDNAETRLELSSGRSAPMSTASTPPVRT--TATQTCSW 213
+L+L L + +++ C+ PD A L+L RS ++TAS R+ T C W
Sbjct: 17 VLMLLLLLQARLAQSLPPCS--PDQATALLQLK--RSFTVNTASATAFRSWRAGTDCCHW 72
Query: 214 SASMC 228
+ C
Sbjct: 73 AGVRC 77
>07_03_1690 -
28716998-28717091,28717203-28717897,28718264-28718446,
28718552-28719585,28719805-28719978,28720051-28720168,
28720339-28720521,28720647-28720739,28720981-28721166,
28722247-28722507
Length = 1006
Score = 25.0 bits (52), Expect = 8.4
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 141 WEISSDEHGIDPTGAYHGDSDLQLERINVYYNEASG 248
WE SSD D + + DLQ + +YN+ SG
Sbjct: 408 WEDSSDVKESDMSEDENRSPDLQRTSDSCFYNKVSG 443
>07_03_0104 +
13434954-13435145,13436220-13436288,13436386-13436523,
13436612-13436729,13437214-13437296,13438305-13438400,
13438552-13438720,13438798-13438940,13439027-13439113,
13439197-13439382,13439956-13440123,13441028-13441148,
13441453-13441522,13441694-13441781,13441866-13442018
Length = 626
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +1
Query: 121 TRLELSSGRSAPMSTASTPPVRTTATQTCSWS 216
T E+ S S + T S PP + Q C WS
Sbjct: 160 TPSEVMSSLSHAIGTVSMPPKWSLGYQQCRWS 191
>07_01_0253 +
1888831-1889399,1890121-1890526,1890980-1891195,
1891441-1891548,1892085-1892359,1892462-1892714
Length = 608
Score = 25.0 bits (52), Expect = 8.4
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +2
Query: 167 HRPHRCVPRRLRLAAGAHQCVLQ 235
H P PRRLRLAA A LQ
Sbjct: 20 HTPKPSPPRRLRLAAAAAASRLQ 42
>06_03_0232 - 18507872-18508792
Length = 306
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 150 SSDEHGIDPTGAYHGDSDLQLERINVYYNEAS 245
S DE +DP AY ++ E + Y+NE S
Sbjct: 218 SEDEVYVDPLEAYEAARNVAGEGPSTYFNEES 249
>05_04_0357 +
20602830-20602848,20604210-20604250,20605770-20606519,
20606603-20606834,20607412-20607491,20607981-20608106
Length = 415
Score = 25.0 bits (52), Expect = 8.4
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -2
Query: 249 LRRPHCNTH*CAPAASLSRRGTHRWGRC 166
LRR HCN + P + + G+ G C
Sbjct: 111 LRRSHCNQNSEGPGVTSDKAGSANAGHC 138
>02_01_0792 + 5935644-5935861,5936892-5936940
Length = 88
Score = 25.0 bits (52), Expect = 8.4
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +1
Query: 133 LSSGRSAPMSTASTPPVRTTATQTCSWSASMCITMRPP 246
L G P AST RT C W+ +TM+ P
Sbjct: 34 LGGGGRLPQCAASTTQCRTKGGGRCRWAT---VTMKAP 68
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,705,119
Number of Sequences: 37544
Number of extensions: 144626
Number of successful extensions: 530
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 529
length of database: 14,793,348
effective HSP length: 62
effective length of database: 12,465,620
effective search space used: 261778020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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