Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_D22
(357 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 201 1e-52
03_01_0547 + 4093196-4093657,4094267-4095148 201 1e-52
03_01_0544 + 4082528-4082989,4083585-4084466 201 1e-52
03_01_0543 + 4076981-4077442,4078145-4079026 201 1e-52
02_04_0462 + 23131433-23132836 54 2e-08
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 53 6e-08
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 50 7e-07
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 49 1e-06
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 37 0.004
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 37 0.004
11_06_0516 + 24502645-24504507 31 0.35
08_02_1414 + 26901937-26902597,26903361-26903397,26903733-269037... 29 1.1
04_04_0436 + 25186144-25187915,25188020-25188077,25188472-25188888 28 2.5
03_03_0225 - 15587557-15588774 28 2.5
07_03_1080 + 23815232-23817040 27 4.3
03_05_0728 - 27174157-27174408,27175316-27175364,27175454-271755... 27 5.7
01_02_0020 - 10269252-10269314,10269442-10269483,10269759-102702... 27 5.7
07_03_0823 + 21765960-21766064,21766166-21766327,21766616-217667... 26 7.6
05_02_0052 + 6124880-6124956,6125097-6125250,6125327-6125920,612... 26 7.6
01_06_1829 + 40186268-40186492,40186599-40186988,40187495-40187980 26 7.6
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 201 bits (491), Expect = 1e-52
Identities = 89/116 (76%), Positives = 105/116 (90%)
Frame = +1
Query: 10 LQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNLG 189
LQDVYKIGGIGTVPVGRVETG+LKPG VV F P+ +TTEVKSVEMHHEALQEA+PGDN+G
Sbjct: 238 LQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVG 297
Query: 190 FSVLNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHT 357
F+V NV+VK+L+RGYVA +SK++P + AA FT+QVI++NHPGQI NGY PVLDCHT
Sbjct: 298 FNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHT 353
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 201 bits (491), Expect = 1e-52
Identities = 89/116 (76%), Positives = 105/116 (90%)
Frame = +1
Query: 10 LQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNLG 189
LQDVYKIGGIGTVPVGRVETG+LKPG VV F P+ +TTEVKSVEMHHEALQEA+PGDN+G
Sbjct: 238 LQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVG 297
Query: 190 FSVLNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHT 357
F+V NV+VK+L+RGYVA +SK++P + AA FT+QVI++NHPGQI NGY PVLDCHT
Sbjct: 298 FNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHT 353
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 201 bits (491), Expect = 1e-52
Identities = 89/116 (76%), Positives = 105/116 (90%)
Frame = +1
Query: 10 LQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNLG 189
LQDVYKIGGIGTVPVGRVETG+LKPG VV F P+ +TTEVKSVEMHHEALQEA+PGDN+G
Sbjct: 238 LQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVG 297
Query: 190 FSVLNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHT 357
F+V NV+VK+L+RGYVA +SK++P + AA FT+QVI++NHPGQI NGY PVLDCHT
Sbjct: 298 FNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHT 353
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 201 bits (491), Expect = 1e-52
Identities = 89/116 (76%), Positives = 105/116 (90%)
Frame = +1
Query: 10 LQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNLG 189
LQDVYKIGGIGTVPVGRVETG+LKPG VV F P+ +TTEVKSVEMHHEALQEA+PGDN+G
Sbjct: 238 LQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVG 297
Query: 190 FSVLNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHT 357
F+V NV+VK+L+RGYVA +SK++P + AA FT+QVI++NHPGQI NGY PVLDCHT
Sbjct: 298 FNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHT 353
>02_04_0462 + 23131433-23132836
Length = 467
Score = 54.4 bits (125), Expect = 2e-08
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 5/115 (4%)
Frame = +1
Query: 10 LQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTE--VKSVEMHHEALQEAVPGDN 183
++DV+ I G GTV GR+E G +K G V T V VEM + + +A+ GDN
Sbjct: 283 VEDVFSITGRGTVATGRIERGTVKVGDTVDIVGIRETRNCTVTGVEMFQKTMDDAMAGDN 342
Query: 184 LGFSVLNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQIS---NGYTP 339
+G + + ++ RG V + P D V+ + G+ S GY P
Sbjct: 343 VGLLLRGMQKDDIERGMVLAKPASITPHTKFDAVVYVLKKDEGGRHSPFFPGYRP 397
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 53.2 bits (122), Expect = 6e-08
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Frame = +1
Query: 16 DVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNLGFS 195
D YK +GTV +G++E+G + G ++ P +V SV + ++ A PG+N+
Sbjct: 189 DKYK--DMGTVVMGKIESGTISEGDNMLVMPNKANVKVISVHCDEDRVRSAAPGENVRVK 246
Query: 196 VLNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLN--HPGQISNGYTPVLDCHT 357
+ + ++ G+V K NP ++F AQ+ +L + GY VL H+
Sbjct: 247 LSGIEEDDITAGFVLSSIK-NPVSAISEFRAQLQILELLDNAIFTAGYKAVLHIHS 301
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 49.6 bits (113), Expect = 7e-07
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Frame = +1
Query: 10 LQDVYKIGGIGTVPVGRVETGILKPG---TVVVFAPAN-ITTEVKSVEMHHEALQEAVPG 177
++DV+ I G GTV GRVE G +K G ++ P+ + T V VEM + L G
Sbjct: 272 IEDVFSIQGRGTVVTGRVEQGTIKTGEDVEILGLTPSGPLKTTVTGVEMFKKILDHGEAG 331
Query: 178 DNLGFSVLNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVL 303
DN+G + + +++RG V K + F A++ VL
Sbjct: 332 DNVGLLLRGLKRGDVQRGQVV--CKPGTVKTYQKFEAEIYVL 371
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 48.8 bits (111), Expect = 1e-06
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Frame = +1
Query: 16 DVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNLGFS 195
D YK +GTV +G++E+G ++ G ++ P +V + + ++ A P +N+
Sbjct: 234 DKYK--DMGTVVMGKIESGTIREGDSLLVMPNKTNVKVIGISLDEHKVRRAGPAENVRVK 291
Query: 196 VLNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLN--HPGQISNGYTPVLDCHT 357
+ + +++ G+V S NP +F AQ+ +L + GY VL H+
Sbjct: 292 LSGIEDEDIMAGFVL-SSIGNPVGAVTEFNAQLQILELLDNAIFTAGYKAVLHIHS 346
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 37.1 bits (82), Expect = 0.004
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 16 DVYKIGGIGTVPV-GRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNLGF 192
DV K G G++ETG ++ G+ V+ +P VKS+E + A GDN+
Sbjct: 486 DVIKSQSTGQFAAFGKLETGAIRIGSKVLISPCGEVAAVKSIERDSNSCDIARAGDNVAV 545
Query: 193 SVLNVSVKELRRG 231
S+ + +L G
Sbjct: 546 SLQGIDGSKLILG 558
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 37.1 bits (82), Expect = 0.004
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 16 DVYKIGGIGTVPV-GRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNLGF 192
DV K G G++ETG ++ G+ V+ +P VKS+E + A GDN+
Sbjct: 486 DVIKSQSTGQFAAFGKLETGAIRIGSKVLISPCGEVAAVKSIERDSNSCDIARAGDNVAV 545
Query: 193 SVLNVSVKELRRG 231
S+ + +L G
Sbjct: 546 SLQGIDGSKLILG 558
>11_06_0516 + 24502645-24504507
Length = 620
Score = 30.7 bits (66), Expect = 0.35
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = +1
Query: 136 VEMHHEALQEAVPGDNLGFSVLNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPG 315
VE HEAL AV D V+ S++E+ R GD + PP + V++ G
Sbjct: 114 VEQVHEALL-AVDAD---IEVIKASIREVYRFPCDGDERRGPPPPSTAPATGVVMTRRMG 169
Query: 316 QISNG 330
+I G
Sbjct: 170 EIRRG 174
>08_02_1414 +
26901937-26902597,26903361-26903397,26903733-26903791,
26904198-26904388,26904591-26904680,26904833-26904926,
26905008-26905159,26905250-26905347,26905400-26905459,
26905460-26905598,26905686-26905784,26905883-26906018,
26906352-26906413
Length = 625
Score = 29.1 bits (62), Expect = 1.1
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
Frame = +1
Query: 52 VGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNLGFSVLNVSVKELRRG 231
+G + + P T+V +P T KSVE +E L A G ++G + +
Sbjct: 252 LGTISMDKVTPSTIVGPSPVAGITVDKSVEFSYEELSNATQGFSIGNKIGQGGFGAVYYA 311
Query: 232 YVAGDS---KNNPPRGAADFTAQVIVLNH 309
+ G+ K + +F A++ VL H
Sbjct: 312 ELRGEKAAIKKMDMQATHEFLAELKVLTH 340
>04_04_0436 + 25186144-25187915,25188020-25188077,25188472-25188888
Length = 748
Score = 27.9 bits (59), Expect = 2.5
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 118 TTEVKSVEMHHEALQEAVPGDNLGFSVLNVSVKEL-RRGYVAGDSKNNPPRGAADFTAQV 294
T ++ ++E + L+ V G + L E+ RRG +++ PR +A + QV
Sbjct: 139 TKKITALETECQRLRTMVQKRLPGPAALAKMKDEVERRGSNCVENRRRKPRSSAQSSPQV 198
Query: 295 IVLNHPGQISNGY 333
+ HP +S GY
Sbjct: 199 VTPRHP--VSEGY 209
>03_03_0225 - 15587557-15588774
Length = 405
Score = 27.9 bits (59), Expect = 2.5
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +3
Query: 75 PKAWYCCRFCPC*HHY*SQVRGNAPRGSTRSCTR 176
P+ W C FC H Y ++ G A + SC +
Sbjct: 167 PEFWTACPFCSYVHQYQRELVGRALKCPNESCRK 200
>07_03_1080 + 23815232-23817040
Length = 602
Score = 27.1 bits (57), Expect = 4.3
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 71 PVSTLPTGTVPIPPILYTS 15
P S+ PTGT P PP+ +S
Sbjct: 123 PASSTPTGTAPTPPLSTSS 141
>03_05_0728 - 27174157-27174408,27175316-27175364,27175454-27175536,
27175673-27175753,27175838-27175894,27176103-27176202,
27176280-27176350,27176427-27176567,27176657-27176863,
27177442-27177612,27177735-27177815,27177887-27177940,
27178040-27178154,27178302-27178441,27178976-27179197,
27179278-27179376,27179461-27179580,27179776-27179981,
27180072-27180249,27180426-27180486,27180587-27180696,
27180765-27180896,27181124-27181165,27181592-27181762,
27181806-27181808,27181848-27181974,27182130-27182164,
27182982-27183083,27183167-27183224,27183314-27183415,
27183513-27183659,27183744-27183880,27183973-27184122,
27184234-27184393,27184930-27185075,27185162-27185305,
27185535-27185663,27186376-27186420,27187103-27187192,
27187473-27187475
Length = 1506
Score = 26.6 bits (56), Expect = 5.7
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 61 VETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNLGFSVLNVSVKEL 222
+E L G VVV +P N ++ E+H +A +N FSV + K +
Sbjct: 1422 IEGSQLTSGKVVVDSPTNDIWQIGRYEVHRSLASDA--SENHSFSVQQTAPKRM 1473
>01_02_0020 -
10269252-10269314,10269442-10269483,10269759-10270244,
10270338-10270421,10270491-10270556,10270718-10270810,
10270901-10271987,10273338-10273362,10273881-10273899
Length = 654
Score = 26.6 bits (56), Expect = 5.7
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -2
Query: 98 TTTVPGFRIPVSTLPTGTVPIPP 30
T+T+P F +P T+P+ +PP
Sbjct: 538 TSTMPMFGVPGQTIPSSASSVPP 560
>07_03_0823 +
21765960-21766064,21766166-21766327,21766616-21766741,
21766831-21766956,21767519-21767698,21768204-21768452
Length = 315
Score = 26.2 bits (55), Expect = 7.6
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +3
Query: 180 QSRFQRFKRICQGIAPWLRCRRFEKQPTQGSCRLHSASHC 299
+S+ + + +G+ WL C + + PT +C + +A HC
Sbjct: 15 KSKLTSTQDVLRGLVDWL-CSQL-RNPTHPNCSVPTAMHC 52
>05_02_0052 +
6124880-6124956,6125097-6125250,6125327-6125920,
6126344-6126757,6126835-6126846
Length = 416
Score = 26.2 bits (55), Expect = 7.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 227 RRNSLTDTFKTLKPRLSPGTASCRAS 150
RR L D+FK L+ L P T +AS
Sbjct: 255 RREKLNDSFKALRDVLPPATKKDKAS 280
>01_06_1829 + 40186268-40186492,40186599-40186988,40187495-40187980
Length = 366
Score = 26.2 bits (55), Expect = 7.6
Identities = 10/19 (52%), Positives = 14/19 (73%), Gaps = 2/19 (10%)
Frame = -1
Query: 51 GYCSNTADF--VYVLQASC 1
G+CSNT DF +Y + A+C
Sbjct: 304 GFCSNTRDFATLYTMHANC 322
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.136 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,418,052
Number of Sequences: 37544
Number of extensions: 201069
Number of successful extensions: 596
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 594
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 542368620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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