Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_D22
(357 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 232 8e-64
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 225 9e-62
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 158 2e-41
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 154 3e-40
DQ435335-1|ABD92650.1| 135|Apis mellifera OBP18 protein. 26 0.12
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 1.9
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 1.9
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 4.4
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 5.8
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 232 bits (568), Expect = 8e-64
Identities = 107/116 (92%), Positives = 112/116 (96%)
Frame = +1
Query: 10 LQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNLG 189
LQDVYKIGGIGTVPVGRVETG+LKPG VV FAPA +TTEVKSVEMHHEALQEAVPGDN+G
Sbjct: 250 LQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSVEMHHEALQEAVPGDNVG 309
Query: 190 FSVLNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHT 357
F+V NVSVKELRRGYVAGDSKNNPP+GAADFTAQVIVLNHPGQISNGYTPVLDCHT
Sbjct: 310 FNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHT 365
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 225 bits (551), Expect = 9e-62
Identities = 104/116 (89%), Positives = 110/116 (94%)
Frame = +1
Query: 10 LQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNLG 189
LQDVYKIGGIGTVPVGRVETGILKPG +V FAPA +TTEVKSVEMHHEAL EA+PGDN+G
Sbjct: 250 LQDVYKIGGIGTVPVGRVETGILKPGMLVTFAPAALTTEVKSVEMHHEALTEALPGDNVG 309
Query: 190 FSVLNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHT 357
F+V N+SVKELRRGYVAGDSKN PPRGAADFTAQVIVLNHPGQISNGYTPVLDCHT
Sbjct: 310 FNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHT 365
Score = 21.4 bits (43), Expect = 3.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 182 LSPGTASCRASWCISTDLTSVVMLAGAKTTTVPG 81
L PG A ++T++ SV M A T +PG
Sbjct: 272 LKPGMLVTFAPAALTTEVKSVEMHHEALTEALPG 305
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 158 bits (383), Expect = 2e-41
Identities = 74/82 (90%), Positives = 78/82 (95%)
Frame = +1
Query: 10 LQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNLG 189
LQDVYKIGGIGTVPVGRVETG+LKPG VV FAPA +TTEVKSVEMHHEALQEAVPGDN+G
Sbjct: 193 LQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSVEMHHEALQEAVPGDNVG 252
Query: 190 FSVLNVSVKELRRGYVAGDSKN 255
F+V NVSVKELRRGYVAGDSKN
Sbjct: 253 FNVKNVSVKELRRGYVAGDSKN 274
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 154 bits (373), Expect = 3e-40
Identities = 69/76 (90%), Positives = 73/76 (96%)
Frame = +1
Query: 130 KSVEMHHEALQEAVPGDNLGFSVLNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNH 309
KSVEMHHEAL EA+PGDN+GF+V N+SVKELRRGYVAGDSKN PPRGAADFTAQVIVLNH
Sbjct: 1 KSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNH 60
Query: 310 PGQISNGYTPVLDCHT 357
PGQISNGYTPVLDCHT
Sbjct: 61 PGQISNGYTPVLDCHT 76
>DQ435335-1|ABD92650.1| 135|Apis mellifera OBP18 protein.
Length = 135
Score = 26.2 bits (55), Expect = 0.12
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = +1
Query: 22 YKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNLGFSVL 201
++IG VP+ R+ET I F NI E + V++ E L + G + G +
Sbjct: 22 FQIGLRAVVPICRIETSI-DQQKEDDFRDGNIDVEDEKVQLFSECLIKKFNGYDDGGNFN 80
Query: 202 NVSVKEL 222
V ++E+
Sbjct: 81 EVVIREI 87
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.2 bits (45), Expect = 1.9
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 199 LNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPG 315
L S ++LR ++A + + P+G Q++VLN G
Sbjct: 280 LFASTRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAG 318
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 22.2 bits (45), Expect = 1.9
Identities = 8/39 (20%), Positives = 20/39 (51%)
Frame = -2
Query: 143 ISTDLTSVVMLAGAKTTTVPGFRIPVSTLPTGTVPIPPI 27
+ T++T+ + ++ G +P+++LP + I I
Sbjct: 831 VVTNVTTTINTPTTSVISMSGTTVPITSLPASSTSINSI 869
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.0 bits (42), Expect = 4.4
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +3
Query: 252 KQPTQGSCRLHSASHCAKSPRSNIKRIHTCIGLP 353
K TQ S + + + P S +R HT G+P
Sbjct: 1048 KTYTQYSVVVQAFNKVGSGPMSEERRQHTAEGVP 1081
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 20.6 bits (41), Expect = 5.8
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 255 QPTQGSCRLHSASHCAKSPRS 317
Q TQ LH S A+SP S
Sbjct: 665 QHTQSQLHLHLTSPPARSPSS 685
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.316 0.136 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,510
Number of Sequences: 438
Number of extensions: 2051
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8308335
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.6 bits)
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