Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_D21
         (207 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   0.29 
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    20   2.7  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    20   2.7  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    19   4.7  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    19   4.7  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.4 bits (48), Expect = 0.29
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 42  RDGDEAGALACNRYGCSRALLLR 110
           + GD  G  ACNR     A+L R
Sbjct: 752 KPGDHLGVFACNRSELVEAILKR 774


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 20.2 bits (40), Expect = 2.7
 Identities = 4/9 (44%), Positives = 8/9 (88%)
 Frame = +3

Query: 150 WHFIIDKDV 176
           WHF++D+ +
Sbjct: 297 WHFVVDRQL 305


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 20.2 bits (40), Expect = 2.7
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 32  EPGPDEPSAA 3
           E GPDEP+ A
Sbjct: 99  EAGPDEPAGA 108


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 19.4 bits (38), Expect = 4.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 9   TWFVRAGLGKLRDGDEAGA 65
           T F+R  +G L  G  AGA
Sbjct: 109 TQFLRYFVGNLASGGAAGA 127


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 19.4 bits (38), Expect = 4.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 9   TWFVRAGLGKLRDGDEAGA 65
           T F+R  +G L  G  AGA
Sbjct: 109 TQFLRYFVGNLASGGAAGA 127


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,520
Number of Sequences: 438
Number of extensions: 754
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  2912559
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)