Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_D20
(262 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161 75 6e-15
01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129 64 2e-11
02_04_0074 - 19474786-19474812,19475174-19475400,19476362-194764... 63 3e-11
07_01_1001 - 8460467-8460799 59 4e-10
07_03_0321 + 16757414-16757743 58 7e-10
01_06_0098 - 26416768-26416998 31 0.096
07_03_0809 - 21669632-21669637,21669871-21670131,21670573-216707... 28 0.90
12_01_0731 - 6516894-6517473,6517485-6519574 27 1.6
05_01_0239 - 1785699-1785980,1786061-1786284,1786380-1786526,178... 27 1.6
03_05_1124 + 30559633-30559674,30559781-30559890,30559973-305600... 27 2.7
06_03_1190 - 28274801-28275163,28275662-28275853,28275965-282760... 26 3.6
06_03_1115 - 27725583-27725864,27726189-27726251,27726345-27727214 26 3.6
01_01_0223 + 1901898-1901983,1902079-1902154,1902256-1902308,190... 26 3.6
12_01_0993 - 10069179-10070057,10070708-10071049 26 4.8
09_01_0170 - 2459344-2459493,2459720-2459784,2459905-2459963,246... 26 4.8
02_02_0390 - 9640749-9641312 26 4.8
01_02_0089 - 10997882-10997957,10998139-10998423,10998519-109985... 26 4.8
11_01_0471 - 3648871-3649078,3649841-3649926,3650111-3650155,365... 25 6.3
12_01_0736 + 6582371-6585370 25 8.4
12_01_0718 + 6339982-6342981 25 8.4
12_01_0715 - 6230393-6231559,6233234-6234553 25 8.4
12_01_0708 - 6137865-6140909 25 8.4
05_06_0207 + 26377836-26378201,26379785-26379906,26380025-263802... 25 8.4
05_01_0146 - 953957-956278,956468-956786,957185-957213 25 8.4
04_03_0630 - 18182681-18182931,18183397-18183463,18184899-181849... 25 8.4
03_06_0259 + 32712976-32714335,32714454-32714587,32714904-327151... 25 8.4
01_06_1102 - 34541341-34541561,34541691-34541769,34541880-345419... 25 8.4
>05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161
Length = 113
Score = 75.4 bits (177), Expect = 6e-15
Identities = 35/65 (53%), Positives = 51/65 (78%)
Frame = +1
Query: 34 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEALRG 213
M+ +AAYLLAVLGG SP+A D++ IL SVG+EA+ E+L+ ++SEL GK++ E+I A R
Sbjct: 1 MKLIAAYLLAVLGGNTSPSADDIKNILESVGVEANDERLEFLLSELEGKDITEVIAAGRE 60
Query: 214 KLSSM 228
K +S+
Sbjct: 61 KFASV 65
>01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129
Length = 114
Score = 63.7 bits (148), Expect = 2e-11
Identities = 28/65 (43%), Positives = 47/65 (72%)
Frame = +1
Query: 34 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEALRG 213
M++++AYL+A L G +SP A D+ IL SVG E D+ K++ ++S+++GK++ ELI R
Sbjct: 1 MKFISAYLMAYLAGNSSPTAEDLTTILESVGCEIDNAKMELLLSQVSGKDITELIACGRE 60
Query: 214 KLSSM 228
K +S+
Sbjct: 61 KFASV 65
>02_04_0074 -
19474786-19474812,19475174-19475400,19476362-19476496,
19478662-19479193
Length = 306
Score = 62.9 bits (146), Expect = 3e-11
Identities = 28/66 (42%), Positives = 47/66 (71%)
Frame = +1
Query: 31 KMRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEALR 210
+M++++AYLLA L G +P+A D+ IL SVG E D K++ ++S+L GK++ E+I + R
Sbjct: 193 RMKFISAYLLATLAGNPNPSAEDLTTILESVGAEVDHGKMELLLSQLAGKDITEIIASGR 252
Query: 211 GKLSSM 228
K +S+
Sbjct: 253 EKFASV 258
>07_01_1001 - 8460467-8460799
Length = 110
Score = 59.3 bits (137), Expect = 4e-10
Identities = 26/57 (45%), Positives = 39/57 (68%)
Frame = +1
Query: 34 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEA 204
MR+VAAYL+A +GG ASP DV IL +VG + D +KL + ++ GK++ E++ A
Sbjct: 1 MRFVAAYLMATIGGNASPTKDDVRAILGAVGADVDEDKLGYLFDQVAGKDLSEILAA 57
>07_03_0321 + 16757414-16757743
Length = 109
Score = 58.4 bits (135), Expect = 7e-10
Identities = 26/57 (45%), Positives = 39/57 (68%)
Frame = +1
Query: 34 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEA 204
MR+VAAYL+A +GG ASP DV IL +VG + D +KL + ++ GK++ E++ A
Sbjct: 1 MRFVAAYLMATIGGNASPTKDDVRAILGAVGADIDEDKLGYLFDQVAGKDLAEILAA 57
>01_06_0098 - 26416768-26416998
Length = 76
Score = 31.5 bits (68), Expect = 0.096
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 85 PAAADVEKILSSVGIEADSEKLKKVISELNGKN 183
P V KI+ +V IEADS + K ++ L GK+
Sbjct: 16 PPPPAVVKIIETVHIEADSAEFKSIVQRLTGKD 48
>07_03_0809 -
21669632-21669637,21669871-21670131,21670573-21670752,
21671458-21672819
Length = 602
Score = 28.3 bits (60), Expect = 0.90
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 70 GGKA-SPAAADVEKILSSVGIEADSEKLKKVISELNGKNVE 189
GG+ SPA D+ L+ G E DS + ++S+LNG E
Sbjct: 45 GGQGDSPATQDLLSKLNGSGGEGDSPATQDLLSKLNGSGGE 85
>12_01_0731 - 6516894-6517473,6517485-6519574
Length = 889
Score = 27.5 bits (58), Expect = 1.6
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 62 PCWAAKRPQLLLMSKRSSALWG 127
PCW +K PQLL++ +S+ G
Sbjct: 714 PCWMSKLPQLLVLVLKSNRFSG 735
>05_01_0239 -
1785699-1785980,1786061-1786284,1786380-1786526,
1786667-1786775,1786880-1786981,1787090-1787164,
1787277-1787453,1787534-1787623,1787717-1787844,
1787909-1788356
Length = 593
Score = 27.5 bits (58), Expect = 1.6
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +2
Query: 209 AASSLPCRRVAPP 247
A S LPCRRVAPP
Sbjct: 18 ALSRLPCRRVAPP 30
>03_05_1124 + 30559633-30559674,30559781-30559890,30559973-30560030,
30560455-30560718,30560803-30560940,30561264-30561315,
30561525-30561604,30561929-30561988,30562084-30562164,
30562299-30562376,30563548-30563676,30563896-30564039,
30564145-30564290,30564402-30564558,30564657-30564715,
30564800-30564959,30565054-30565203,30565309-30565445,
30565531-30565677,30565995-30566052,30566417-30566518,
30566590-30566627,30566846-30566972,30567053-30567223,
30567313-30567444,30567575-30567681,30567815-30567875,
30567970-30568147,30568245-30568450,30568781-30568879,
30569021-30569236,30569333-30569472,30569559-30569660,
30569747-30569861,30570129-30570194,30570323-30570480,
30570594-30570690,30570931-30571137,30571435-30571505,
30571648-30571747,30571836-30571892,30571969-30572025,
30572108-30572188,30572319-30572401,30572504-30572651
Length = 1722
Score = 26.6 bits (56), Expect = 2.7
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +1
Query: 91 AADVEKILSSVGIEADSEKLKKVISELNGK--NVEELIEALRGKLSSM 228
A D+EK L V + +S++L + I E + K ++E+IE L LSS+
Sbjct: 1239 AEDLEKRLLEV--QKESDELSREILEKDSKLNQLQEMIERLETNLSSL 1284
>06_03_1190 -
28274801-28275163,28275662-28275853,28275965-28276088,
28276177-28276320,28276524-28276640,28277189-28277308,
28277433-28277521,28277609-28277685,28278250-28278322,
28278578-28279012,28280247-28280442,28281270-28281490,
28281591-28281703,28282552-28283146,28283236-28283418,
28283548-28283712,28283808-28284029
Length = 1142
Score = 26.2 bits (55), Expect = 3.6
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +2
Query: 38 VTWPRIYSPCWAAKRPQLLLMSKRSSALW 124
+ WPR W A P L S++S W
Sbjct: 132 IRWPRSRDEVWKANIPHTHLASEKSDQRW 160
>06_03_1115 - 27725583-27725864,27726189-27726251,27726345-27727214
Length = 404
Score = 26.2 bits (55), Expect = 3.6
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1
Query: 79 ASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAL 207
A AAA E ++ +E+ + KKV+++ NG+ ++ + E L
Sbjct: 317 AGAAAATAEAAMTERSVESVLFRGKKVMAQTNGERLDGVAEQL 359
>01_01_0223 +
1901898-1901983,1902079-1902154,1902256-1902308,
1902400-1902887,1902983-1903143,1903234-1903531,
1903619-1903773
Length = 438
Score = 26.2 bits (55), Expect = 3.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 235 PPAWKRACRVKPQLTL 188
PP WK A R KPQL +
Sbjct: 82 PPMWKLAFRFKPQLPI 97
>12_01_0993 - 10069179-10070057,10070708-10071049
Length = 406
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 113 RIFSTSAAAGDALPPNTA 60
R F++SAAAGDA P N +
Sbjct: 384 RAFNSSAAAGDAYPINVS 401
>09_01_0170 -
2459344-2459493,2459720-2459784,2459905-2459963,
2460441-2460487,2460793-2460894,2461810-2461935,
2462035-2462169,2463396-2463512,2463583-2463714
Length = 310
Score = 25.8 bits (54), Expect = 4.8
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +1
Query: 67 LGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEALRGK 216
L GK + A + I ++ E VIS KNV+E + LR K
Sbjct: 8 LEGKVAVVTASTQGIGLAIAERLGLEGAAVVISSRKKKNVDEAVVGLRAK 57
>02_02_0390 - 9640749-9641312
Length = 187
Score = 25.8 bits (54), Expect = 4.8
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -1
Query: 253 RARRRHPPAWKRACRV-KPQLTLQHFC 176
R RR HP +R RV P+L LQH+C
Sbjct: 125 RGRRLHP---RRHVRVLHPRLPLQHYC 148
>01_02_0089 -
10997882-10997957,10998139-10998423,10998519-10998589,
10998685-10998761,10998858-10998963,10999062-10999189,
10999291-10999423,11000005-11000133,11000220-11000375,
11000770-11000846,11000938-11000998,11001249-11001383,
11001642-11001765,11001852-11001917,11002010-11002112,
11002603-11002652,11003795-11003895
Length = 625
Score = 25.8 bits (54), Expect = 4.8
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 67 LGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEALR-GKL 219
+GG P + + IL I K+ V+ EL GK+ L+EAL+ GK+
Sbjct: 217 IGGDVFPGSTLSDHILRFNNIP--QVKMMVVLGELGGKDEYSLVEALKQGKV 266
>11_01_0471 -
3648871-3649078,3649841-3649926,3650111-3650155,
3650306-3650815,3651700-3653757
Length = 968
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 97 DVEKILSSVGIEADSEKLKKVISELNGKNVEELIEALR 210
DV + LSS ++ + L V+ L +NVEE++ L+
Sbjct: 322 DVLRALSSPNVDVRRKVLDLVLDLLTPRNVEEVVMYLK 359
>12_01_0736 + 6582371-6585370
Length = 999
Score = 25.0 bits (52), Expect = 8.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 62 PCWAAKRPQLLLMSKRSSALWG 127
PCW +K PQL ++ +S+ G
Sbjct: 726 PCWMSKLPQLQVLVLKSNRFIG 747
>12_01_0718 + 6339982-6342981
Length = 999
Score = 25.0 bits (52), Expect = 8.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 62 PCWAAKRPQLLLMSKRSSALWG 127
PCW +K PQL ++ +S+ G
Sbjct: 726 PCWMSKLPQLQVLVLKSNRFIG 747
>12_01_0715 - 6230393-6231559,6233234-6234553
Length = 828
Score = 25.0 bits (52), Expect = 8.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 62 PCWAAKRPQLLLMSKRSSALWG 127
PCW +K PQL ++ +S+ G
Sbjct: 653 PCWMSKLPQLQVLVLKSNKFIG 674
>12_01_0708 - 6137865-6140909
Length = 1014
Score = 25.0 bits (52), Expect = 8.4
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +2
Query: 62 PCWAAKRPQLLLMSKRSSALWG 127
PCW +K P+L +++ +S+ G
Sbjct: 742 PCWMSKLPKLQVLALKSNKFTG 763
>05_06_0207 +
26377836-26378201,26379785-26379906,26380025-26380220,
26380642-26380759,26380869-26380916,26380995-26381095,
26381178-26381285
Length = 352
Score = 25.0 bits (52), Expect = 8.4
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 100 VEKILSSVGIEADSEKLKKVISELNGKNV-EELIEALRGKLS 222
V+ LSS G E D+EK+ +I + + LI AL G +S
Sbjct: 276 VQSYLSSSGEEPDAEKVNNLIKSIEKYTLASHLIWALWGIIS 317
>05_01_0146 - 953957-956278,956468-956786,957185-957213
Length = 889
Score = 25.0 bits (52), Expect = 8.4
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 76 KASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEALRGKL 219
K +++V ++ + A+SE+ K +E KN+E + L+GKL
Sbjct: 269 KVEILSSEVVRLKGLLDSTAESEESKNRETEELVKNLESEVSVLKGKL 316
>04_03_0630 -
18182681-18182931,18183397-18183463,18184899-18184964,
18185057-18185178,18185263-18185425,18186082-18186329,
18186418-18186751,18186857-18187000,18187079-18187144
Length = 486
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +1
Query: 67 LGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEE 192
+G ASPAAA+++ + + I A + V +E+ + +E
Sbjct: 52 IGRPASPAAAEMDTVTTMEAINAKIVSMDIVRAEIKAVDAQE 93
>03_06_0259 +
32712976-32714335,32714454-32714587,32714904-32715144,
32715254-32715462,32715522-32715583,32715690-32715801,
32715916-32716208,32716400-32716520
Length = 843
Score = 25.0 bits (52), Expect = 8.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 62 PCWAAKRPQLLLMSKRSSALWG 127
P W + PQL ++S R+++L G
Sbjct: 171 PAWIGELPQLAVLSLRNNSLGG 192
>01_06_1102 -
34541341-34541561,34541691-34541769,34541880-34541929,
34542291-34542576
Length = 211
Score = 25.0 bits (52), Expect = 8.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -2
Query: 123 HRAEDLFDISSSWGRFAAQHGE 58
H+A + F +++SW + AA H E
Sbjct: 84 HKAAETFVLANSWRKAAAAHHE 105
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,980,386
Number of Sequences: 37544
Number of extensions: 115038
Number of successful extensions: 494
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 494
length of database: 14,793,348
effective HSP length: 65
effective length of database: 12,352,988
effective search space used: 259412748
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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