Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_D20
(262 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic ri... 91 4e-19
CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein. 91 4e-19
CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein. 91 4e-19
BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, larg... 91 4e-19
BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, larg... 91 4e-19
BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, larg... 91 4e-19
BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, larg... 91 4e-19
AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2 pr... 91 4e-19
Z22551-1|CAA80271.1| 1356|Homo sapiens 156 kDa Protein protein. 28 6.2
L25616-1|AAB65853.1| 1300|Homo sapiens kinectin protein. 28 6.2
D13629-1|BAA02794.2| 1307|Homo sapiens KIAA0004 protein. 28 6.2
BC117132-1|AAI17133.1| 1306|Homo sapiens kinectin 1 (kinesin rec... 28 6.2
BC112337-1|AAI12338.1| 1306|Homo sapiens kinectin 1 (kinesin rec... 28 6.2
BC050555-1|AAH50555.1| 873|Homo sapiens KTN1 protein protein. 28 6.2
AY536375-1|AAT66048.1| 820|Homo sapiens rhabdomyosarcoma antige... 28 6.2
AY264265-1|AAP20418.1| 1357|Homo sapiens kinectin variant 1 prot... 28 6.2
CR457252-1|CAG33533.1| 430|Homo sapiens FLJ10276 protein. 27 8.2
BC037280-1|AAH37280.1| 953|Homo sapiens coatomer protein comple... 27 8.2
BC028381-1|AAH28381.1| 430|Homo sapiens BSDC1 protein protein. 27 8.2
AL109945-6|CAI22890.1| 474|Homo sapiens BSD domain containing 1... 27 8.2
AL109945-5|CAI22889.1| 430|Homo sapiens BSD domain containing 1... 27 8.2
AK001138-1|BAA91517.1| 430|Homo sapiens protein ( Homo sapiens ... 27 8.2
AF111807-1|AAL39009.1| 953|Homo sapiens MSTP026 protein. 27 8.2
AF084457-1|AAD41240.1| 953|Homo sapiens beta-cop homolog protein. 27 8.2
>M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P2 mRNA, complete cds. ).
Length = 115
Score = 91.5 bits (217), Expect = 4e-19
Identities = 43/65 (66%), Positives = 55/65 (84%)
Frame = +1
Query: 34 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEALRG 213
MRYVA+YLLA LGG +SP+A D++KIL SVGIEAD ++L KVISELNGKN+E++I G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 214 KLSSM 228
KL+S+
Sbjct: 61 KLASV 65
>CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 91.5 bits (217), Expect = 4e-19
Identities = 43/65 (66%), Positives = 55/65 (84%)
Frame = +1
Query: 34 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEALRG 213
MRYVA+YLLA LGG +SP+A D++KIL SVGIEAD ++L KVISELNGKN+E++I G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 214 KLSSM 228
KL+S+
Sbjct: 61 KLASV 65
>CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 91.5 bits (217), Expect = 4e-19
Identities = 43/65 (66%), Positives = 55/65 (84%)
Frame = +1
Query: 34 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEALRG 213
MRYVA+YLLA LGG +SP+A D++KIL SVGIEAD ++L KVISELNGKN+E++I G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 214 KLSSM 228
KL+S+
Sbjct: 61 KLASV 65
>BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 91.5 bits (217), Expect = 4e-19
Identities = 43/65 (66%), Positives = 55/65 (84%)
Frame = +1
Query: 34 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEALRG 213
MRYVA+YLLA LGG +SP+A D++KIL SVGIEAD ++L KVISELNGKN+E++I G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 214 KLSSM 228
KL+S+
Sbjct: 61 KLASV 65
>BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 91.5 bits (217), Expect = 4e-19
Identities = 43/65 (66%), Positives = 55/65 (84%)
Frame = +1
Query: 34 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEALRG 213
MRYVA+YLLA LGG +SP+A D++KIL SVGIEAD ++L KVISELNGKN+E++I G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 214 KLSSM 228
KL+S+
Sbjct: 61 KLASV 65
>BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 91.5 bits (217), Expect = 4e-19
Identities = 43/65 (66%), Positives = 55/65 (84%)
Frame = +1
Query: 34 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEALRG 213
MRYVA+YLLA LGG +SP+A D++KIL SVGIEAD ++L KVISELNGKN+E++I G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 214 KLSSM 228
KL+S+
Sbjct: 61 KLASV 65
>BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 91.5 bits (217), Expect = 4e-19
Identities = 43/65 (66%), Positives = 55/65 (84%)
Frame = +1
Query: 34 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEALRG 213
MRYVA+YLLA LGG +SP+A D++KIL SVGIEAD ++L KVISELNGKN+E++I G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 214 KLSSM 228
KL+S+
Sbjct: 61 KLASV 65
>AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2
protein.
Length = 115
Score = 91.5 bits (217), Expect = 4e-19
Identities = 43/65 (66%), Positives = 55/65 (84%)
Frame = +1
Query: 34 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEALRG 213
MRYVA+YLLA LGG +SP+A D++KIL SVGIEAD ++L KVISELNGKN+E++I G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 214 KLSSM 228
KL+S+
Sbjct: 61 KLASV 65
>Z22551-1|CAA80271.1| 1356|Homo sapiens 156 kDa Protein protein.
Length = 1356
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/23 (65%), Positives = 19/23 (82%), Gaps = 2/23 (8%)
Frame = +1
Query: 142 EKLKKVISELNG--KNVEELIEA 204
E+LKKVI E +G K+VEEL+EA
Sbjct: 796 EELKKVIHEKDGKIKSVEELLEA 818
>L25616-1|AAB65853.1| 1300|Homo sapiens kinectin protein.
Length = 1300
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/23 (65%), Positives = 19/23 (82%), Gaps = 2/23 (8%)
Frame = +1
Query: 142 EKLKKVISELNG--KNVEELIEA 204
E+LKKVI E +G K+VEEL+EA
Sbjct: 797 EELKKVIHEKDGKIKSVEELLEA 819
>D13629-1|BAA02794.2| 1307|Homo sapiens KIAA0004 protein.
Length = 1307
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/23 (65%), Positives = 19/23 (82%), Gaps = 2/23 (8%)
Frame = +1
Query: 142 EKLKKVISELNG--KNVEELIEA 204
E+LKKVI E +G K+VEEL+EA
Sbjct: 804 EELKKVIHEKDGKIKSVEELLEA 826
>BC117132-1|AAI17133.1| 1306|Homo sapiens kinectin 1 (kinesin
receptor) protein.
Length = 1306
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/23 (65%), Positives = 19/23 (82%), Gaps = 2/23 (8%)
Frame = +1
Query: 142 EKLKKVISELNG--KNVEELIEA 204
E+LKKVI E +G K+VEEL+EA
Sbjct: 797 EELKKVIHEKDGKIKSVEELLEA 819
>BC112337-1|AAI12338.1| 1306|Homo sapiens kinectin 1 (kinesin
receptor) protein.
Length = 1306
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/23 (65%), Positives = 19/23 (82%), Gaps = 2/23 (8%)
Frame = +1
Query: 142 EKLKKVISELNG--KNVEELIEA 204
E+LKKVI E +G K+VEEL+EA
Sbjct: 797 EELKKVIHEKDGKIKSVEELLEA 819
>BC050555-1|AAH50555.1| 873|Homo sapiens KTN1 protein protein.
Length = 873
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/23 (65%), Positives = 19/23 (82%), Gaps = 2/23 (8%)
Frame = +1
Query: 142 EKLKKVISELNG--KNVEELIEA 204
E+LKKVI E +G K+VEEL+EA
Sbjct: 797 EELKKVIHEKDGKIKSVEELLEA 819
>AY536375-1|AAT66048.1| 820|Homo sapiens rhabdomyosarcoma antigen
MU-RMS-40.19 protein.
Length = 820
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/23 (65%), Positives = 19/23 (82%), Gaps = 2/23 (8%)
Frame = +1
Query: 142 EKLKKVISELNG--KNVEELIEA 204
E+LKKVI E +G K+VEEL+EA
Sbjct: 260 EELKKVIHEKDGKIKSVEELLEA 282
>AY264265-1|AAP20418.1| 1357|Homo sapiens kinectin variant 1
protein.
Length = 1357
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/23 (65%), Positives = 19/23 (82%), Gaps = 2/23 (8%)
Frame = +1
Query: 142 EKLKKVISELNG--KNVEELIEA 204
E+LKKVI E +G K+VEEL+EA
Sbjct: 797 EELKKVIHEKDGKIKSVEELLEA 819
>CR457252-1|CAG33533.1| 430|Homo sapiens FLJ10276 protein.
Length = 430
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -3
Query: 125 PTELRIFSTSAAAGDALPPNTASKYAAT 42
PT+LR+F ++ +G + P N K ++T
Sbjct: 362 PTDLRVFELNSDSGKSTPSNNGKKGSST 389
>BC037280-1|AAH37280.1| 953|Homo sapiens coatomer protein complex,
subunit beta 1 protein.
Length = 953
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +1
Query: 97 DVEKILSSVGIEADSEKLKKVISELNGKNVEELIEALR 210
D+ ++LS+ +E + L+ + ++ +NVEEL+ L+
Sbjct: 324 DILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVLK 361
>BC028381-1|AAH28381.1| 430|Homo sapiens BSDC1 protein protein.
Length = 430
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -3
Query: 125 PTELRIFSTSAAAGDALPPNTASKYAAT 42
PT+LR+F ++ +G + P N K ++T
Sbjct: 362 PTDLRVFELNSDSGKSTPSNNGKKGSST 389
>AL109945-6|CAI22890.1| 474|Homo sapiens BSD domain containing 1
protein.
Length = 474
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -3
Query: 125 PTELRIFSTSAAAGDALPPNTASKYAAT 42
PT+LR+F ++ +G + P N K ++T
Sbjct: 379 PTDLRVFELNSDSGKSTPSNNGKKGSST 406
>AL109945-5|CAI22889.1| 430|Homo sapiens BSD domain containing 1
protein.
Length = 430
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -3
Query: 125 PTELRIFSTSAAAGDALPPNTASKYAAT 42
PT+LR+F ++ +G + P N K ++T
Sbjct: 362 PTDLRVFELNSDSGKSTPSNNGKKGSST 389
>AK001138-1|BAA91517.1| 430|Homo sapiens protein ( Homo sapiens
cDNA FLJ10276 fis, clone HEMBB1001182. ).
Length = 430
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -3
Query: 125 PTELRIFSTSAAAGDALPPNTASKYAAT 42
PT+LR+F ++ +G + P N K ++T
Sbjct: 362 PTDLRVFELNSDSGKSTPSNNGKKGSST 389
>AF111807-1|AAL39009.1| 953|Homo sapiens MSTP026 protein.
Length = 953
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +1
Query: 97 DVEKILSSVGIEADSEKLKKVISELNGKNVEELIEALR 210
D+ ++LS+ +E + L+ + ++ +NVEEL+ L+
Sbjct: 324 DILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVLK 361
>AF084457-1|AAD41240.1| 953|Homo sapiens beta-cop homolog protein.
Length = 953
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +1
Query: 97 DVEKILSSVGIEADSEKLKKVISELNGKNVEELIEALR 210
D+ ++LS+ +E + L+ + ++ +NVEEL+ L+
Sbjct: 324 DILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVLK 361
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,720,915
Number of Sequences: 237096
Number of extensions: 530158
Number of successful extensions: 1412
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1412
length of database: 76,859,062
effective HSP length: 64
effective length of database: 61,684,918
effective search space used: 1357068196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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