Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_D20
(262 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical ... 74 2e-14
U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical pr... 66 3e-12
AF125459-7|AAD12836.1| 971|Caenorhabditis elegans Hypothetical ... 29 0.34
Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical p... 28 0.79
Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical pr... 28 0.79
AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic catio... 28 0.79
AC025721-10|AAK29908.2| 1019|Caenorhabditis elegans Hypothetical... 28 1.1
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 27 1.4
AF016688-3|AAB66076.2| 674|Caenorhabditis elegans Hypothetical ... 27 1.4
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 27 2.4
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 27 2.4
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 26 3.2
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 26 3.2
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 26 3.2
Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical p... 26 4.2
Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical p... 26 4.2
U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromos... 26 4.2
AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical ... 26 4.2
Z81104-5|CAE17892.1| 285|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z77661-6|CAB01185.1| 192|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z46996-1|CAA87099.1| 472|Caenorhabditis elegans Hypothetical pr... 25 7.4
U00049-1|AAC47053.2| 288|Caenorhabditis elegans Serpentine rece... 25 7.4
AC024843-1|AAR12983.3| 193|Caenorhabditis elegans Hypothetical ... 25 7.4
Z81466-3|CAB03867.1| 593|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z50110-4|CAA90443.2| 203|Caenorhabditis elegans Hypothetical pr... 25 9.8
AL032657-9|CAA21736.1| 829|Caenorhabditis elegans Hypothetical ... 25 9.8
AF142441-1|AAF66614.1| 701|Caenorhabditis elegans H+/oligopepti... 25 9.8
AF100656-3|AAF99968.1| 265|Caenorhabditis elegans Hypothetical ... 25 9.8
AF003146-1|AAB54202.1| 701|Caenorhabditis elegans Oligopeptide ... 25 9.8
>AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical
protein Y62E10A.1 protein.
Length = 110
Score = 73.7 bits (173), Expect = 2e-14
Identities = 35/55 (63%), Positives = 44/55 (80%)
Frame = +1
Query: 34 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELI 198
MRYV+AYLLAVLGG A+P D++ ILS+VG++AD+E K V+S L GK VEELI
Sbjct: 1 MRYVSAYLLAVLGGNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELI 55
>U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical
protein C37A2.7 protein.
Length = 107
Score = 66.1 bits (154), Expect = 3e-12
Identities = 31/65 (47%), Positives = 43/65 (66%)
Frame = +1
Query: 34 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEALRG 213
M+Y+ AYLLA LGG ASP+A DV K+L + G++ D E V+ L GK + E+I +
Sbjct: 1 MKYLGAYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKV 60
Query: 214 KLSSM 228
KLSS+
Sbjct: 61 KLSSV 65
>AF125459-7|AAD12836.1| 971|Caenorhabditis elegans Hypothetical
protein Y25C1A.5 protein.
Length = 971
Score = 29.5 bits (63), Expect = 0.34
Identities = 11/42 (26%), Positives = 27/42 (64%)
Frame = +1
Query: 97 DVEKILSSVGIEADSEKLKKVISELNGKNVEELIEALRGKLS 222
D+ ++LSS G+E + L + ++ +NVE+++ L+ +++
Sbjct: 325 DILRVLSSPGLEVRKKTLSLALDLVSSRNVEDMVMFLKKEIN 366
>Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical
protein F52F12.1a protein.
Length = 585
Score = 28.3 bits (60), Expect = 0.79
Identities = 14/34 (41%), Positives = 26/34 (76%), Gaps = 3/34 (8%)
Frame = +1
Query: 118 SVGIEADSEKLKKVISELNGK---NVEELIEALR 210
SVG AD++K K I+++NGK +V+EL+++++
Sbjct: 297 SVGKWADAKKQLKKIAKMNGKSNVDVDELVDSMK 330
>Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical
protein F52F12.1b protein.
Length = 568
Score = 28.3 bits (60), Expect = 0.79
Identities = 14/34 (41%), Positives = 26/34 (76%), Gaps = 3/34 (8%)
Frame = +1
Query: 118 SVGIEADSEKLKKVISELNGK---NVEELIEALR 210
SVG AD++K K I+++NGK +V+EL+++++
Sbjct: 280 SVGKWADAKKQLKKIAKMNGKSNVDVDELVDSMK 313
>AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic cation
transporter 1 protein.
Length = 568
Score = 28.3 bits (60), Expect = 0.79
Identities = 14/34 (41%), Positives = 26/34 (76%), Gaps = 3/34 (8%)
Frame = +1
Query: 118 SVGIEADSEKLKKVISELNGK---NVEELIEALR 210
SVG AD++K K I+++NGK +V+EL+++++
Sbjct: 280 SVGKWADAKKQLKKIAKMNGKSNVDVDELVDSMK 313
>AC025721-10|AAK29908.2| 1019|Caenorhabditis elegans Hypothetical
protein Y48G8AL.1 protein.
Length = 1019
Score = 27.9 bits (59), Expect = 1.1
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 127 IEADSEKLKKVISELNGKNVEELIEALRGKLSSM 228
I+ D E LKK++ E + V LIE++ L+SM
Sbjct: 381 IKLDHESLKKLLDEGDALEVMSLIESVFSSLASM 414
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 27.5 bits (58), Expect = 1.4
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 34 MRYVAAYLLAVLGGKASPAAAD-VEKILSSVGIEADSEKLKKVISELNGKNVEELIEALR 210
++Y ++ L LG + + +E +S++GI+ D ++ KV+S G ++ L +
Sbjct: 172 LQYNSSVDLKYLGQNVTVTPEEPIESKMSAMGIDDDKKRNSKVVSTAVGYKIQILNASAE 231
Query: 211 GKLSSM 228
G S +
Sbjct: 232 GSTSDV 237
>AF016688-3|AAB66076.2| 674|Caenorhabditis elegans Hypothetical
protein F18A12.4 protein.
Length = 674
Score = 27.5 bits (58), Expect = 1.4
Identities = 19/71 (26%), Positives = 35/71 (49%)
Frame = +1
Query: 10 FRVLAT*KMRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVE 189
FR+L K +A L +++ S + + +IL + G++ DSE++ K E + ++
Sbjct: 189 FRILTEGKFVRIAPTLGSIVHN--STMISMISEILEANGVQPDSEEISKEFEEYSSLQMK 246
Query: 190 ELIEALRGKLS 222
GKLS
Sbjct: 247 LAKYQSSGKLS 257
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 26.6 bits (56), Expect = 2.4
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 70 GGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEALR 210
G K + + EK+ + ++ SEK KK EL K + EL + LR
Sbjct: 505 GAKMAIEQLEQEKVKLTNELQTSSEKTKKASGELEAK-ISELEKKLR 550
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 26.6 bits (56), Expect = 2.4
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 70 GGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEALR 210
G K + + EK+ + ++ SEK KK EL K + EL + LR
Sbjct: 507 GAKMAIEQLEQEKVKLTNELQTSSEKTKKASGELEAK-ISELEKKLR 552
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 26.6 bits (56), Expect = 2.4
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 70 GGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEALR 210
G K + + EK+ + ++ SEK KK EL K + EL + LR
Sbjct: 507 GAKMAIEQLEQEKVKLTNELQTSSEKTKKASGELEAK-ISELEKKLR 552
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 26.2 bits (55), Expect = 3.2
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = +1
Query: 76 KASPAAADVEKILSSVGIEADS----EKLKKVISELNGKNVEE 192
KA A ++EKI V DS EKL+K + E + K VEE
Sbjct: 850 KAGKEAEELEKINDKVKALEDSLAKEEKLRKELEESSAKLVEE 892
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 26.2 bits (55), Expect = 3.2
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = +1
Query: 76 KASPAAADVEKILSSVGIEADS----EKLKKVISELNGKNVEE 192
KA A ++EKI V DS EKL+K + E + K VEE
Sbjct: 850 KAGKEAEELEKINDKVKALEDSLAKEEKLRKELEESSAKLVEE 892
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 26.2 bits (55), Expect = 3.2
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = +1
Query: 76 KASPAAADVEKILSSVGIEADS----EKLKKVISELNGKNVEE 192
KA A ++EKI V DS EKL+K + E + K VEE
Sbjct: 853 KAGKEAEELEKINDKVKALEDSLAKEEKLRKELEESSAKLVEE 895
>Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 127 IEADSEKLKKVISELNGKNVEELIEA 204
I D LKK I+ L+ K V+ELI A
Sbjct: 1023 ITEDFNMLKKTIATLDKKKVDELIRA 1048
>Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 127 IEADSEKLKKVISELNGKNVEELIEA 204
I D LKK I+ L+ K V+ELI A
Sbjct: 1023 ITEDFNMLKKTIATLDKKKVDELIRA 1048
>U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromosome
and X-chromosomeassociated MIX-1 protein protein.
Length = 1244
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 127 IEADSEKLKKVISELNGKNVEELIEA 204
I D LKK I+ L+ K V+ELI A
Sbjct: 1023 ITEDFNMLKKTIATLDKKKVDELIRA 1048
>AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 127 IEADSEKLKKVISELNGKNVEELIEA 204
I D LKK I+ L+ K V+ELI A
Sbjct: 1023 ITEDFNMLKKTIATLDKKKVDELIRA 1048
>Z81104-5|CAE17892.1| 285|Caenorhabditis elegans Hypothetical
protein M199.7 protein.
Length = 285
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 133 ADSEKLKKVISELNGKNVEELIEAL 207
A E+L++V+S+L VEE +EA+
Sbjct: 192 ASKEELERVVSKLQTCRVEENVEAV 216
>Z77661-6|CAB01185.1| 192|Caenorhabditis elegans Hypothetical
protein F40G12.7 protein.
Length = 192
Score = 25.0 bits (52), Expect = 7.4
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 5/41 (12%)
Frame = +1
Query: 88 AAADVEKILSSVG----IEADSE-KLKKVISELNGKNVEEL 195
A D EK+ V ++ D+E KLKK+ ++LNG++ E+L
Sbjct: 22 ALQDNEKLTRDVSDAKLLKEDAEIKLKKIRNKLNGEHSEKL 62
>Z46996-1|CAA87099.1| 472|Caenorhabditis elegans Hypothetical
protein C34C12.1 protein.
Length = 472
Score = 25.0 bits (52), Expect = 7.4
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 5/41 (12%)
Frame = +1
Query: 88 AAADVEKILSSVG----IEADSE-KLKKVISELNGKNVEEL 195
A D EK+ V ++ D+E KLKK+ ++LNG++ E+L
Sbjct: 22 ALQDNEKLTRDVSDAKLLKEDAEIKLKKIRNKLNGEHSEKL 62
>U00049-1|AAC47053.2| 288|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 1 protein.
Length = 288
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +2
Query: 35 CVTWPRIYSPCWAAKRPQLLLMSKRSSALW 124
CV WP YS W +L S LW
Sbjct: 133 CVLWPLSYSLFWKKWLKSILTTMAISPCLW 162
>AC024843-1|AAR12983.3| 193|Caenorhabditis elegans Hypothetical
protein Y61A9LA.12 protein.
Length = 193
Score = 25.0 bits (52), Expect = 7.4
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 5/41 (12%)
Frame = +1
Query: 88 AAADVEKILSSVG----IEADSE-KLKKVISELNGKNVEEL 195
A D EK+ V ++ D+E KLKK+ ++LNG++ E+L
Sbjct: 22 ALQDNEKLTRDVSDAKLLKEDAEIKLKKIRNKLNGEHSEKL 62
>Z81466-3|CAB03867.1| 593|Caenorhabditis elegans Hypothetical
protein C09H6.3 protein.
Length = 593
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 103 EKILSSVGIEADSEKLKKVISE 168
EKIL + G + SE +K V+SE
Sbjct: 528 EKILLAAGYDPKSELMKMVVSE 549
>Z50110-4|CAA90443.2| 203|Caenorhabditis elegans Hypothetical
protein F18H3.1 protein.
Length = 203
Score = 24.6 bits (51), Expect = 9.8
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 121 VGIEADSEKLKKVISELNGKNVEELIEALRGKLSSM 228
VG+ D +LK + NGK VE++I +RG + M
Sbjct: 137 VGVAYDHVELKFYV---NGKAVEDVITGVRGPVYPM 169
>AL032657-9|CAA21736.1| 829|Caenorhabditis elegans Hypothetical
protein Y47H9C.9 protein.
Length = 829
Score = 24.6 bits (51), Expect = 9.8
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
Frame = +1
Query: 88 AAADVEKILSSVG----IEADSE-KLKKVISELNGKNVEEL 195
A D EK+ V ++ D+E KLKK+ +LNG++ E+L
Sbjct: 16 ALQDNEKLTRDVSDAKLLKEDAEIKLKKIRDKLNGEHSEKL 56
>AF142441-1|AAF66614.1| 701|Caenorhabditis elegans H+/oligopeptide
symporter OPT-3 protein.
Length = 701
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 45 GRVFTRRVGRQSVPSCC*CRKDPQLCGD 128
GR++ +RVG +S+ S + D +L GD
Sbjct: 382 GRIYLQRVGNESLISDFRYKSDGRLIGD 409
>AF100656-3|AAF99968.1| 265|Caenorhabditis elegans Hypothetical
protein F49F1.1 protein.
Length = 265
Score = 24.6 bits (51), Expect = 9.8
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +3
Query: 87 SCC*CRKDPQLCGD 128
SC C++DP +CGD
Sbjct: 44 SCGICKQDPGVCGD 57
>AF003146-1|AAB54202.1| 701|Caenorhabditis elegans Oligopeptide
transporter protein 3 protein.
Length = 701
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 45 GRVFTRRVGRQSVPSCC*CRKDPQLCGD 128
GR++ +RVG +S+ S + D +L GD
Sbjct: 382 GRIYLQRVGNESLISDFRYKSDGRLIGD 409
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,170,712
Number of Sequences: 27780
Number of extensions: 76835
Number of successful extensions: 254
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 254
length of database: 12,740,198
effective HSP length: 65
effective length of database: 10,934,498
effective search space used: 229624458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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