Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_D19
(226 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 1.4
AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. 21 2.5
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 2.5
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 19 5.7
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 19 5.7
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 19 5.7
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 19 7.5
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 19 7.5
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 19 9.9
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 19 9.9
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 19 9.9
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 19 9.9
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 19 9.9
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 19 9.9
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 19 9.9
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 19 9.9
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 19 9.9
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 19 9.9
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 19 9.9
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 19 9.9
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.4 bits (43), Expect = 1.4
Identities = 9/35 (25%), Positives = 16/35 (45%)
Frame = -3
Query: 221 PILFSANMIGVPTIEGKINAGKLLPAKPHFTKPVQ 117
PI +NM G+P + + +P P P++
Sbjct: 419 PIPNMSNMSGMPPLPNMPGSMPTMPTMPSMAGPIR 453
>AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein.
Length = 147
Score = 20.6 bits (41), Expect = 2.5
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -3
Query: 158 KLLPAKPHFTKPVQLSQTIT 99
KL P PH L QT+T
Sbjct: 100 KLPPLHPHTAMVTHLPQTLT 119
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 20.6 bits (41), Expect = 2.5
Identities = 6/23 (26%), Positives = 12/23 (52%)
Frame = +1
Query: 127 FVKCGFAGSNFPAFIFPSMVGTP 195
F+ + + I+P ++GTP
Sbjct: 830 FLPVSYMSTTMAGVIYPPVIGTP 852
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 19.4 bits (38), Expect = 5.7
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1
Query: 61 NYNYLYYDFTQNLVS*ITLV 2
+Y +LY+D T +S +TLV
Sbjct: 110 HYLWLYHDKTLLYMSKLTLV 129
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 19.4 bits (38), Expect = 5.7
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +1
Query: 43 SINNCNLLQIIKRGDKGRKVIVCDN 117
SI+ ++L D G K+ +C N
Sbjct: 248 SISYLSVLAFYLPADSGEKIALCIN 272
Score = 19.0 bits (37), Expect = 7.5
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 166 FIFPSMVGTPIILAE 210
F S+VGT IIL E
Sbjct: 493 FTIASIVGTFIILCE 507
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 19.4 bits (38), Expect = 5.7
Identities = 6/15 (40%), Positives = 9/15 (60%)
Frame = -1
Query: 151 CRRNHISQSQFSYHK 107
C RN + ++YHK
Sbjct: 46 CSRNSLMTHIYTYHK 60
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 19.0 bits (37), Expect = 7.5
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -1
Query: 52 YLYYDF 35
YLYYDF
Sbjct: 28 YLYYDF 33
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 19.0 bits (37), Expect = 7.5
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -1
Query: 52 YLYYDF 35
YLYYDF
Sbjct: 43 YLYYDF 48
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.6 bits (36), Expect = 9.9
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -1
Query: 61 NYNYLYYD 38
NYN LYY+
Sbjct: 105 NYNKLYYN 112
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.6 bits (36), Expect = 9.9
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -1
Query: 61 NYNYLYYD 38
NYN LYY+
Sbjct: 105 NYNKLYYN 112
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.6 bits (36), Expect = 9.9
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -1
Query: 61 NYNYLYYD 38
NYN LYY+
Sbjct: 105 NYNKLYYN 112
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.6 bits (36), Expect = 9.9
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -1
Query: 61 NYNYLYYD 38
NYN LYY+
Sbjct: 105 NYNKLYYN 112
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.6 bits (36), Expect = 9.9
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -1
Query: 61 NYNYLYYD 38
NYN LYY+
Sbjct: 105 NYNKLYYN 112
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.6 bits (36), Expect = 9.9
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -1
Query: 61 NYNYLYYD 38
NYN LYY+
Sbjct: 105 NYNKLYYN 112
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.6 bits (36), Expect = 9.9
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -1
Query: 61 NYNYLYYD 38
NYN LYY+
Sbjct: 105 NYNKLYYN 112
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.6 bits (36), Expect = 9.9
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -1
Query: 61 NYNYLYYD 38
NYN LYY+
Sbjct: 105 NYNKLYYN 112
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.6 bits (36), Expect = 9.9
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -1
Query: 61 NYNYLYYD 38
NYN LYY+
Sbjct: 105 NYNKLYYN 112
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 18.6 bits (36), Expect = 9.9
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -1
Query: 61 NYNYLYYD 38
NYN LYY+
Sbjct: 338 NYNKLYYN 345
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 18.6 bits (36), Expect = 9.9
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -1
Query: 61 NYNYLYYD 38
NYN LYY+
Sbjct: 338 NYNKLYYN 345
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 18.6 bits (36), Expect = 9.9
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -2
Query: 93 SFITPFNYLK*ITIIYTMTSLKI 25
+FITPF + +I T K+
Sbjct: 268 AFITPFENRSNLHVIVNATVTKV 290
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,333
Number of Sequences: 438
Number of extensions: 935
Number of successful extensions: 21
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used: 3533460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
- SilkBase 1999-2023 -