Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_D17
         (236 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.    135   2e-34
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   1.5  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    21   4.6  

>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.
          Length = 229

 Score =  135 bits (326), Expect = 2e-34
 Identities = 65/65 (100%), Positives = 65/65 (100%)
 Frame = +1

Query: 40  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
           MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 220 IQKES 234
           IQKES
Sbjct: 61  IQKES 65



 Score =  135 bits (326), Expect = 2e-34
 Identities = 65/65 (100%), Positives = 65/65 (100%)
 Frame = +1

Query: 40  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
           MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136

Query: 220 IQKES 234
           IQKES
Sbjct: 137 IQKES 141



 Score =  135 bits (326), Expect = 2e-34
 Identities = 65/65 (100%), Positives = 65/65 (100%)
 Frame = +1

Query: 40  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
           MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212

Query: 220 IQKES 234
           IQKES
Sbjct: 213 IQKES 217


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -3

Query: 222 DIVIREGSTIFQLFTGEDQSLLI 154
           D  ++   T+FQ+ TGED ++++
Sbjct: 652 DSFVQSLLTVFQILTGEDWNMVM 674


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 75  HHPRGRTL*YYRKCE 119
           HHP   TL Y+R  E
Sbjct: 375 HHPNFTTLNYFRNLE 389


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 280,002
Number of Sequences: 2352
Number of extensions: 5468
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 52
effective length of database: 441,675
effective search space used: 11483550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)