Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_D17
(236 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 132 4e-32
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 132 4e-32
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 132 4e-32
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 132 4e-32
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 132 4e-32
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 87 2e-18
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 77 2e-15
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 75 9e-15
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 54 1e-08
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 54 1e-08
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 53 2e-08
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 43 3e-05
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 40 2e-04
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 39 4e-04
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 38 7e-04
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 38 0.001
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 36 0.003
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 36 0.005
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 35 0.009
Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical pr... 33 0.036
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 32 0.047
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 32 0.047
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 31 0.083
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 29 0.33
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 29 0.58
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ... 28 0.77
U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein ... 28 0.77
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr... 28 0.77
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 27 1.8
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 27 1.8
AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical ... 27 1.8
U64601-8|AAB04576.2| 413|Caenorhabditis elegans Hypothetical pr... 27 2.4
AF000262-7|AAN60523.1| 544|Caenorhabditis elegans Hypothetical ... 26 3.1
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical pr... 25 5.4
U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical p... 25 5.4
Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical p... 25 7.2
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 25 7.2
Z78418-5|CAB01694.2| 361|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z73911-1|CAA98140.1| 262|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical pr... 25 9.5
U40060-3|AAA81142.2| 974|Caenorhabditis elegans Hypothetical pr... 25 9.5
AL110477-20|CAB76740.3| 728|Caenorhabditis elegans Hypothetical... 25 9.5
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 132 bits (318), Expect = 4e-32
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 220 IQKES 234
IQKES
Sbjct: 61 IQKES 65
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 132 bits (318), Expect = 4e-32
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 220 IQKES 234
IQKES
Sbjct: 61 IQKES 65
Score = 132 bits (318), Expect = 4e-32
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 220 IQKES 234
IQKES
Sbjct: 137 IQKES 141
Score = 132 bits (318), Expect = 4e-32
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 220 IQKES 234
IQKES
Sbjct: 213 IQKES 217
Score = 132 bits (318), Expect = 4e-32
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 220 IQKES 234
IQKES
Sbjct: 289 IQKES 293
Score = 132 bits (318), Expect = 4e-32
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 220 IQKES 234
IQKES
Sbjct: 365 IQKES 369
Score = 129 bits (312), Expect = 2e-31
Identities = 63/65 (96%), Positives = 63/65 (96%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
MQIFVKTL GKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 220 IQKES 234
IQKES
Sbjct: 441 IQKES 445
Score = 95.5 bits (227), Expect = 4e-21
Identities = 46/47 (97%), Positives = 46/47 (97%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 180
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAG
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 132 bits (318), Expect = 4e-32
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 220 IQKES 234
IQKES
Sbjct: 61 IQKES 65
Score = 132 bits (318), Expect = 4e-32
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 220 IQKES 234
IQKES
Sbjct: 137 IQKES 141
Score = 132 bits (318), Expect = 4e-32
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 220 IQKES 234
IQKES
Sbjct: 213 IQKES 217
Score = 132 bits (318), Expect = 4e-32
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 220 IQKES 234
IQKES
Sbjct: 289 IQKES 293
Score = 132 bits (318), Expect = 4e-32
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 220 IQKES 234
IQKES
Sbjct: 365 IQKES 369
Score = 132 bits (318), Expect = 4e-32
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 220 IQKES 234
IQKES
Sbjct: 517 IQKES 521
Score = 132 bits (318), Expect = 4e-32
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 220 IQKES 234
IQKES
Sbjct: 593 IQKES 597
Score = 132 bits (318), Expect = 4e-32
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 220 IQKES 234
IQKES
Sbjct: 669 IQKES 673
Score = 132 bits (318), Expect = 4e-32
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 220 IQKES 234
IQKES
Sbjct: 745 IQKES 749
Score = 132 bits (318), Expect = 4e-32
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 220 IQKES 234
IQKES
Sbjct: 821 IQKES 825
Score = 129 bits (312), Expect = 2e-31
Identities = 63/65 (96%), Positives = 63/65 (96%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
MQIFVKTL GKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 220 IQKES 234
IQKES
Sbjct: 441 IQKES 445
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 132 bits (318), Expect = 4e-32
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 220 IQKES 234
IQKES
Sbjct: 61 IQKES 65
Score = 132 bits (318), Expect = 4e-32
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 220 IQKES 234
IQKES
Sbjct: 137 IQKES 141
Score = 132 bits (318), Expect = 4e-32
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 220 IQKES 234
IQKES
Sbjct: 213 IQKES 217
Score = 132 bits (318), Expect = 4e-32
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 220 IQKES 234
IQKES
Sbjct: 289 IQKES 293
Score = 132 bits (318), Expect = 4e-32
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 220 IQKES 234
IQKES
Sbjct: 365 IQKES 369
Score = 132 bits (318), Expect = 4e-32
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 220 IQKES 234
IQKES
Sbjct: 441 IQKES 445
Score = 132 bits (318), Expect = 4e-32
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 220 IQKES 234
IQKES
Sbjct: 517 IQKES 521
Score = 132 bits (318), Expect = 4e-32
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 220 IQKES 234
IQKES
Sbjct: 593 IQKES 597
Score = 132 bits (318), Expect = 4e-32
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 220 IQKES 234
IQKES
Sbjct: 669 IQKES 673
Score = 132 bits (318), Expect = 4e-32
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 220 IQKES 234
IQKES
Sbjct: 745 IQKES 749
Score = 130 bits (315), Expect = 1e-31
Identities = 63/65 (96%), Positives = 64/65 (98%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 220 IQKES 234
IQK+S
Sbjct: 821 IQKQS 825
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 132 bits (318), Expect = 4e-32
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 220 IQKES 234
IQKES
Sbjct: 61 IQKES 65
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 87.0 bits (206), Expect = 2e-18
Identities = 37/61 (60%), Positives = 49/61 (80%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
M I VKTLTGK I L++EP+D +E +K K+++KEGIPP QQRLIFAGKQ+ D +T +DY
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60
Query: 220 I 222
+
Sbjct: 61 V 61
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 76.6 bits (180), Expect = 2e-15
Identities = 34/64 (53%), Positives = 47/64 (73%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 219
+ + VKTL GKTI + ++ +DT+E +K K+Q+K G+PPDQQRLIF QLE+ R L YN
Sbjct: 161 LTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYN 220
Query: 220 IQKE 231
I+ E
Sbjct: 221 IRDE 224
Score = 36.3 bits (80), Expect = 0.003
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +1
Query: 19 VGVR*STMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 147
+ V TM + VKT TGKTIT+E +NVK +++DK+G+
Sbjct: 52 ISVDSKTMLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
Score = 33.5 bits (73), Expect = 0.020
Identities = 20/58 (34%), Positives = 32/58 (55%)
Frame = +1
Query: 61 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 234
+TG IT VE SD I+++ K+ + + P ++ +D RT+SDYNI+ S
Sbjct: 98 VTGDPIT--VEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGS 149
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 74.5 bits (175), Expect = 9e-15
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 150
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 54.0 bits (124), Expect = 1e-08
Identities = 29/63 (46%), Positives = 43/63 (68%)
Frame = +1
Query: 46 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 225
+FVKTL +T+ LEV ++ + ++K KI+ EGIP ++QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 226 KES 234
E+
Sbjct: 57 SEA 59
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 54.0 bits (124), Expect = 1e-08
Identities = 29/63 (46%), Positives = 43/63 (68%)
Frame = +1
Query: 46 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 225
+FVKTL +T+ LEV ++ + ++K KI+ EGIP ++QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 226 KES 234
E+
Sbjct: 57 SEA 59
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 53.2 bits (122), Expect = 2e-08
Identities = 27/64 (42%), Positives = 39/64 (60%)
Frame = +1
Query: 43 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 222
QIFVK L G + ++ DT+ ++K I+ + IP L F+GK+LED ++ DYNI
Sbjct: 155 QIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNI 213
Query: 223 QKES 234
QK S
Sbjct: 214 QKSS 217
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 43.2 bits (97), Expect = 3e-05
Identities = 20/46 (43%), Positives = 33/46 (71%)
Frame = +1
Query: 46 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 183
+FVKTL +T+ LEV ++ + ++K KI+ EGIP ++QRL +A +
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 40.3 bits (90), Expect = 2e-04
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE---DGRTLS 210
++I+V+ G+T TL+ SDT+ +VKAKI +K I P+ Q+L+ L+ D TL
Sbjct: 103 IRIYVEN-AGRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLF 161
Query: 211 DYNIQKES 234
D + + S
Sbjct: 162 DNSFENGS 169
Score = 29.9 bits (64), Expect = 0.25
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 147
M + +KT TGK IT+E S VK +++DK+G+
Sbjct: 1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQGV 31
Score = 27.5 bits (58), Expect = 1.3
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEV 90
+ +FVKT TGKTIT+ +
Sbjct: 181 IDVFVKTYTGKTITISI 197
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 39.1 bits (87), Expect = 4e-04
Identities = 25/64 (39%), Positives = 32/64 (50%)
Frame = +1
Query: 43 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 222
Q FV+ L GKT TL V SDT+E K ++ R+ + GK L D T +YNI
Sbjct: 44 QYFVR-LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEYNI 98
Query: 223 QKES 234
S
Sbjct: 99 SNNS 102
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 38.3 bits (85), Expect = 7e-04
Identities = 22/57 (38%), Positives = 28/57 (49%)
Frame = +1
Query: 64 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 234
+G L V SDTI VK I + R++ K LED TL+ YNIQ+ S
Sbjct: 181 SGNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGS 237
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 37.5 bits (83), Expect = 0.001
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +1
Query: 82 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 228
L V SDTI ++K +I + R++ GK LED +L+ YNIQ+
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQE 258
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 36.3 bits (80), Expect = 0.003
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLED 195
+ + +TLT LE+ TI VKA + ++G P+ Q+LI+ GK L+D
Sbjct: 52 LSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKILDD 105
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 35.5 bits (78), Expect = 0.005
Identities = 21/51 (41%), Positives = 26/51 (50%)
Frame = +1
Query: 82 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 234
L V SDTI +K +I GI R K LED TL+ YNI++ S
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGS 226
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 34.7 bits (76), Expect = 0.009
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +1
Query: 58 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 216
++ G+ ++ +++E +K KI+ + GIP + L GK L D + L+DY
Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY 201
>Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical
protein K08E3.7 protein.
Length = 386
Score = 32.7 bits (71), Expect = 0.036
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +1
Query: 55 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 222
KT + +TL + + IE++ ++ IP D+ ++F GK+L + D ++
Sbjct: 13 KTGQRRNLTLNINITGNIEDLTKDVEKLTEIPSDELEVVFCGKKLSKSTIMRDLSL 68
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 32.3 bits (70), Expect = 0.047
Identities = 13/54 (24%), Positives = 31/54 (57%)
Frame = +1
Query: 61 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 222
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNL 637
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 32.3 bits (70), Expect = 0.047
Identities = 13/54 (24%), Positives = 31/54 (57%)
Frame = +1
Query: 61 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 222
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNL 637
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 31.5 bits (68), Expect = 0.083
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +1
Query: 61 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 234
L G I +E++ DTI V + G+ +QRL+ K+L+ +TL + I+ S
Sbjct: 189 LHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIKDGS 246
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 29.5 bits (63), Expect = 0.33
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 216
M + +KT TGKTIT+E S VK +++ K+G+ AG Q +E T+ D
Sbjct: 1 MLLSIKTSTGKTITVEAPKS-----VKTEVRYKQGVVFAVSYDKDAGNQIIEMEDTVQDV 55
Query: 217 NIQK 228
IQ+
Sbjct: 56 KIQE 59
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 28.7 bits (61), Expect = 0.58
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 52 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 150
+ TL G+TI V P + I + K+ EG+P
Sbjct: 279 ISTLDGRTIFYRVLPGEVIAHADVKVIHNEGMP 311
>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein
363, isoform b protein.
Length = 2692
Score = 28.3 bits (60), Expect = 0.77
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +1
Query: 19 VGVR*STMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 177
+ V+ M +TLTG I + EP + KA +Q E P + QR++ A
Sbjct: 532 LNVQDGVMASVYQTLTGSLIPPKSEPIGRPASPKAILQKAETDPKELQRIVLA 584
>U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein
363, isoform a protein.
Length = 2695
Score = 28.3 bits (60), Expect = 0.77
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +1
Query: 19 VGVR*STMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 177
+ V+ M +TLTG I + EP + KA +Q E P + QR++ A
Sbjct: 532 LNVQDGVMASVYQTLTGSLIPPKSEPIGRPASPKAILQKAETDPKELQRIVLA 584
>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical protein
F48E3.3 protein.
Length = 1493
Score = 28.3 bits (60), Expect = 0.77
Identities = 11/52 (21%), Positives = 28/52 (53%)
Frame = +1
Query: 40 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 195
+Q+ + + TGK++ + VE + +E D+EG+ L+ + ++ ++
Sbjct: 1149 LQVVIDSFTGKSVRVRVEKREGMEERNLLSDDEEGVWSSLSNLVSSKEKTQE 1200
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +1
Query: 34 STMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 207
+T+++ +KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 19 TTIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTV 76
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +1
Query: 34 STMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 207
+T+++ +KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 19 TTIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTV 76
>AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical
protein F55A12.8 protein.
Length = 1043
Score = 27.1 bits (57), Expect = 1.8
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +1
Query: 70 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 168
KT+ +V+ T+E ++ +I+ + +PP QRL
Sbjct: 664 KTVIKQVKDGHTVELLEERIEPRADLPPLLQRL 696
>U64601-8|AAB04576.2| 413|Caenorhabditis elegans Hypothetical
protein M03F4.6 protein.
Length = 413
Score = 26.6 bits (56), Expect = 2.4
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 18 CRRKVINDADFCENPYGEDHHPRG 89
CRR IND D EN D P G
Sbjct: 181 CRRLFINDIDMLENAANTDSCPLG 204
>AF000262-7|AAN60523.1| 544|Caenorhabditis elegans Hypothetical
protein C48E7.2 protein.
Length = 544
Score = 26.2 bits (55), Expect = 3.1
Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = -3
Query: 228 LLDIVIREG---STIFQLFTGEDQSLLIRRDALLILNLGFHIF 109
+++ +++E ST+F G+ + LIR+ ++N GF F
Sbjct: 26 VMETILKESCQLSTLFYKLKGQISNTLIRKSVSTLINFGFVTF 68
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 25.8 bits (54), Expect = 4.1
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 82 LEVEPSDTIENVKAKIQDK-EGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 228
+EV S I V+ K+ + + L + G++L+D R++ YNI +
Sbjct: 100 VEVRNSYLIRYVRVKVANLLNNDLVESFNLYYGGQKLQDNRSIGSYNIDQ 149
>Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical
protein T02C1.2 protein.
Length = 275
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 79 TLEVEPSDTIENVKAKIQDKEGIPPDQQ 162
+L VE D IENV Q +PPD++
Sbjct: 229 SLVVEVIDEIENVPVNTQISPVMPPDEE 256
>U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical
protein C28H8.3 protein.
Length = 1714
Score = 25.4 bits (53), Expect = 5.4
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 222 DIVIREGSTIFQLFTGEDQSLLIRRDALLIL 130
+I +REG TIF G D+ +RR+A + L
Sbjct: 672 EIAVREGRTIFDQHQGTDKQ-EVRRNAAIDL 701
>Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical
protein Y57G11C.49 protein.
Length = 438
Score = 25.0 bits (52), Expect = 7.2
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -1
Query: 80 VMVFPVRVFTKICIVDYLTPTPCH 9
V++ P + T +CI TPT H
Sbjct: 243 VLLIPTYIITVVCIFGLFTPTANH 266
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 25.0 bits (52), Expect = 7.2
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -1
Query: 80 VMVFPVRVFTKICIVDYLTPTPCH 9
V++ P + T +CI TPT H
Sbjct: 244 VLLIPTYIITVVCIFGLFTPTANH 267
>Z78418-5|CAB01694.2| 361|Caenorhabditis elegans Hypothetical
protein F25D7.2 protein.
Length = 361
Score = 24.6 bits (51), Expect = 9.5
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +1
Query: 103 TIENVKAKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSD 213
TI+ VK +++ P+ QRLIF+G L + + L+D
Sbjct: 41 TIKEVKEHVKNCLNNHPEVVTQRLIFSGASLNNEQVLAD 79
>Z73911-1|CAA98140.1| 262|Caenorhabditis elegans Hypothetical
protein T12A7.3 protein.
Length = 262
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 36 NDADFCENPYGEDHHPRGRTL 98
N+ FC+N Y ++ PRG L
Sbjct: 69 NEVAFCDNGYCNNYVPRGSQL 89
>Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical
protein C08H9.2 protein.
Length = 1220
Score = 24.6 bits (51), Expect = 9.5
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 100 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 222
D +E+ + +I D IP R + AG+ + S YN+
Sbjct: 848 DVVEDYEKQITDNVTIPAQFHRGLLAGRGAKIHELQSKYNV 888
>U40060-3|AAA81142.2| 974|Caenorhabditis elegans Hypothetical protein
F38B6.4 protein.
Length = 974
Score = 24.6 bits (51), Expect = 9.5
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 88 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 192
VE +DTIE V+ KIQ +E + A K LE
Sbjct: 939 VEDTDTIETVRQKIQLQEHEMFPNAMIAVAAKILE 973
>AL110477-20|CAB76740.3| 728|Caenorhabditis elegans Hypothetical
protein Y113G7B.18 protein.
Length = 728
Score = 24.6 bits (51), Expect = 9.5
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 128 FKIRRASLLINKD*SSPVNSWKMVEPSLITISRRS 232
+++R+ I D S + WK P++ ISRRS
Sbjct: 287 WRVRKVGDYICGDLSYHIFGWKYDTPAIFDISRRS 321
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,209,148
Number of Sequences: 27780
Number of extensions: 117519
Number of successful extensions: 361
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 360
length of database: 12,740,198
effective HSP length: 58
effective length of database: 11,128,958
effective search space used: 222579160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -