Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_D16
         (204 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    21   1.9  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    20   2.6  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    19   5.9  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    19   7.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    19   7.8  

>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 20.6 bits (41), Expect = 1.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 151 KLKKFTKNQKNGQKLQ 104
           K+ +  K   NGQKLQ
Sbjct: 284 KISELEKEMLNGQKLQ 299


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 20.2 bits (40), Expect = 2.6
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -3

Query: 196 NSN*YVWPGHVLVLSKLKKFTKNQKNGQKLQFLQLLTAMI 77
           N N  V P  + +L +L      QKN QKL+ ++L  ++I
Sbjct: 261 NDNNIVRPDFINMLMEL------QKNPQKLENIKLTDSLI 294



 Score = 18.6 bits (36), Expect = 7.8
 Identities = 7/23 (30%), Positives = 11/23 (47%)
 Frame = +2

Query: 110 FLPIFLVFGKFFQFTQNEDVTGP 178
           FL ++      F F ++  V GP
Sbjct: 15  FLALYYYLTSTFDFWKSRGVVGP 37


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 19.0 bits (37), Expect = 5.9
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = -2

Query: 134 QKPKKWAKTAIFTAAY 87
           Q  K W K AIF   Y
Sbjct: 19  QNNKGWWKNAIFYQVY 34


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 18.6 bits (36), Expect = 7.8
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +3

Query: 27  LLYEIIKTILDPSP 68
           LLY  I+  L P P
Sbjct: 424 LLYSFIEQTLQPGP 437


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 18.6 bits (36), Expect = 7.8
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +3

Query: 27  LLYEIIKTILDPSP 68
           LLY  I+  L P P
Sbjct: 424 LLYSFIEQTLQPGP 437


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,869
Number of Sequences: 438
Number of extensions: 886
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  2785926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)