Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_D14
(251 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 31 0.031
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 30 0.054
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 30 0.054
SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pom... 27 0.29
SPBC1198.01 |||glutathione-dependent formaldehyde dehydrogenase ... 27 0.50
SPBC646.09c |int6|yin6|translation initiation factor eIF3e|Schiz... 25 1.2
SPAC15A10.13 |ppk3||serine/threonine protein kinase Ppk3|Schizos... 24 2.7
SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb... 24 2.7
SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|c... 24 3.5
SPBC1604.20c |tea2|klp4|kinesin-like protein Tea2|Schizosaccharo... 23 4.7
SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1 |Sc... 23 6.2
SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr 1... 23 6.2
SPBC1711.03 |||conserved eukaryotic protein|Schizosaccharomyces ... 23 8.2
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 23 8.2
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 30.7 bits (66), Expect = 0.031
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +1
Query: 76 EKIRQIKAMANEEVNIGNYTSAVDFYNIAIGEYPECAALYSNLSDAYMKRG 228
E+ ++K N + +Y A+D Y AI P YSN + AY + G
Sbjct: 81 EEAEKLKLEGNNAIAAKDYQKALDLYTKAIEIDPTSPVYYSNRAAAYNQLG 131
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 29.9 bits (64), Expect = 0.054
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 88 QIKAMANEEVNIGNYTSAVDFYNIAIGEYPECAALYSNLSDAY 216
++KA N + +Y +A+D++ AIG LYSN S Y
Sbjct: 4 ELKAKGNAAFSKKDYKTAIDYFTQAIGLDERNHILYSNRSACY 46
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 29.9 bits (64), Expect = 0.054
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 88 QIKAMANEEVNIGNYTSAVDFYNIAIGEYPECAALYSNLSDAYMK 222
++K AN+ + G+ A+D Y AI A LYSN S A++K
Sbjct: 7 ELKNEANKFLKEGHIVQAIDLYTKAIELDSTNAILYSNRSLAHLK 51
>SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1562
Score = 27.5 bits (58), Expect = 0.29
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -3
Query: 189 GRTFRVLPYSDVVEINRRCIVPYI-HLLVCHRFNLPNFLRQQ 67
GR + PY D +I+ R PY+ + +V R+N NF+ Q
Sbjct: 209 GRIIIINPYDDSSQIDERTGKPYMQNSIVSSRYNKYNFVPLQ 250
>SPBC1198.01 |||glutathione-dependent formaldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 26.6 bits (56), Expect = 0.50
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 112 EVNIGNYTSAVDFYNIAIGEYPECAALY 195
+VN G++ SA+ Y +G+ P C A Y
Sbjct: 151 DVNYGSHHSAIFGYTKLLGDVPGCQAEY 178
>SPBC646.09c |int6|yin6|translation initiation factor
eIF3e|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 25.4 bits (53), Expect = 1.2
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Frame = +1
Query: 67 LLPEKIRQIKAMANEEVNIGNYTSAVD--FYNIAIGEYPE--CAALYSNLSDAYMKRGWS 234
+ PE+I + A + N GNY A D ++ A + PE +A + + + W
Sbjct: 136 ITPERIAVLYKFAQFQYNCGNYGGASDLLYHFRAFSKDPELNASATWGKFASEILTVDWD 195
Query: 235 G 237
G
Sbjct: 196 G 196
>SPAC15A10.13 |ppk3||serine/threonine protein kinase
Ppk3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 637
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 120 YRELYICG*FLQHRYRGVPG 179
Y + Y G F+ H Y G PG
Sbjct: 197 YLDSYELGKFISHLYNGTPG 216
>SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1389
Score = 24.2 bits (50), Expect = 2.7
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +1
Query: 112 EVNIGNYTSAVDFYNIAIGEYPECAALYSNLSDAYMKRG 228
E+N N+ A+ + A+ P+ +S L +AY + G
Sbjct: 660 ELNAKNFHKAIVHFQSALRISPKDTNAWSGLGEAYARSG 698
>SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 599
Score = 23.8 bits (49), Expect = 3.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 132 IVPYIHLLVCHRFNLPNFLR 73
IV ++HLL C R + FL+
Sbjct: 267 IVVFLHLLPCERTSFKKFLK 286
>SPBC1604.20c |tea2|klp4|kinesin-like protein
Tea2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 23.4 bits (48), Expect = 4.7
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +1
Query: 70 LPEKIRQIKAMANEEVNIGNYTSAVD 147
LP+ IRQ +A+ N + + + SA++
Sbjct: 460 LPQDIRQAEAVTNVQAELASLHSALE 485
>SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1573
Score = 23.0 bits (47), Expect = 6.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 91 IKAMANEEVNIGNYTSAVDFYNIAIGEY 174
I MA+ VN+ T+ + YNI G+Y
Sbjct: 605 IAMMASFGVNVTKSTTEENTYNIPCGKY 632
>SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 881
Score = 23.0 bits (47), Expect = 6.2
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +3
Query: 201 FIGCVHETWVVGRHLR 248
F+ C W + RHLR
Sbjct: 348 FVPCARTLWAICRHLR 363
>SPBC1711.03 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 22.6 bits (46), Expect = 8.2
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 67 LLPEKIRQIKAMANEEVNIGNYTSAVD 147
LLPE I K E + G Y VD
Sbjct: 67 LLPESIEARKCFLIESLKSGKYLKPVD 93
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 22.6 bits (46), Expect = 8.2
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3
Query: 102 HRFNLPNFLRQQ 67
H FN PN LRQQ
Sbjct: 205 HEFNEPNDLRQQ 216
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.129 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 875,207
Number of Sequences: 5004
Number of extensions: 13494
Number of successful extensions: 29
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 2,362,478
effective HSP length: 60
effective length of database: 2,062,238
effective search space used: 47431474
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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