Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_D14
(251 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132948-2|CAC51076.2| 496|Caenorhabditis elegans Hypothetical ... 35 0.007
AF016422-4|AAG24172.1| 320|Caenorhabditis elegans Hypothetical ... 35 0.007
U77412-1|AAB63465.1| 1151|Caenorhabditis elegans O-linked GlcNAc... 30 0.19
U21320-2|ABC71824.1| 973|Caenorhabditis elegans O-linked glcnac... 30 0.19
U21320-1|AAA62535.2| 1151|Caenorhabditis elegans O-linked glcnac... 30 0.19
Z81117-7|CAB03315.2| 329|Caenorhabditis elegans Hypothetical pr... 30 0.25
U49956-2|AAO38616.1| 136|Caenorhabditis elegans Dauer or aging ... 29 0.44
AC084153-4|AAK84598.2| 836|Caenorhabditis elegans Hypothetical ... 28 0.76
Z29644-1|CAA82752.1| 540|Caenorhabditis elegans kinesin light c... 27 1.3
U55369-14|AAN84862.1| 540|Caenorhabditis elegans Kinesin light ... 27 1.3
U55369-13|AAN84863.1| 501|Caenorhabditis elegans Kinesin light ... 27 1.3
U55369-12|AAK52182.1| 522|Caenorhabditis elegans Kinesin light ... 27 1.3
U55369-11|AAT68902.1| 531|Caenorhabditis elegans Kinesin light ... 27 1.3
Z29645-1|CAA82753.1| 522|Caenorhabditis elegans kinesin light c... 27 1.8
U80027-4|AAC48121.1| 344|Caenorhabditis elegans Serpentine rece... 27 1.8
U29488-5|AAL27236.1| 417|Caenorhabditis elegans Hypothetical pr... 26 4.1
U29488-4|AAL27235.1| 401|Caenorhabditis elegans Hypothetical pr... 26 4.1
U39674-6|AAA80416.1| 291|Caenorhabditis elegans Hypothetical pr... 25 7.1
AF003739-7|AAB58068.1| 339|Caenorhabditis elegans Hypothetical ... 25 7.1
Z83228-4|CAB05735.2| 318|Caenorhabditis elegans Hypothetical pr... 25 9.4
U64856-4|AAB04988.2| 506|Caenorhabditis elegans Bbs (bardet-bie... 25 9.4
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 25 9.4
>AL132948-2|CAC51076.2| 496|Caenorhabditis elegans Hypothetical
protein Y39B6A.2 protein.
Length = 496
Score = 35.1 bits (77), Expect = 0.007
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +1
Query: 76 EKIRQIKAMANEEVNIGNYTSAVDFYNIAIGEYPECAALYSNLSDAYMKR 225
EK IK AN+ Y A D Y++AI +P A LY N + AY+K+
Sbjct: 27 EKAGMIKDEANQFFKDQVYDVAADLYSVAIEIHP-TAVLYGNRAQAYLKK 75
>AF016422-4|AAG24172.1| 320|Caenorhabditis elegans Hypothetical
protein R09E12.3 protein.
Length = 320
Score = 35.1 bits (77), Expect = 0.007
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +1
Query: 73 PEKIRQIKAMANEEVNIGNYTSAVDFYNIAIGEYPECAALYSN 201
PE ++ K NE G+Y +A+ YN A+ PE A LYSN
Sbjct: 137 PELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSN 179
>U77412-1|AAB63465.1| 1151|Caenorhabditis elegans O-linked GlcNAc
transferase protein.
Length = 1151
Score = 30.3 bits (65), Expect = 0.19
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +1
Query: 64 ELLPEKIRQIKAMANEEVNIGNYTSAVDFYNIAIGEYPECAALYSNLSDAYMKRGWSGD 240
EL P +AN + G A Y A+ YPE AA +SNL+ ++G D
Sbjct: 425 ELCPTHADSQNNLANIKREQGKIEDATRLYLKALEIYPEFAAAHSNLASILQQQGKLND 483
Score = 26.2 bits (55), Expect = 3.1
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 127 NYTSAVDFYNIAIGEYPECAALYSNLSDAYMKRG 228
N ++ + +AI +CA YSNL + Y ++G
Sbjct: 174 NLEKSMQYSMLAIKVNNQCAEAYSNLGNYYKEKG 207
>U21320-2|ABC71824.1| 973|Caenorhabditis elegans O-linked glcnac
transferase protein1, isoform b protein.
Length = 973
Score = 30.3 bits (65), Expect = 0.19
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +1
Query: 64 ELLPEKIRQIKAMANEEVNIGNYTSAVDFYNIAIGEYPECAALYSNLSDAYMKRGWSGD 240
EL P +AN + G A Y A+ YPE AA +SNL+ ++G D
Sbjct: 247 ELCPTHADSQNNLANIKREQGKIEDATRLYLKALEIYPEFAAAHSNLASILQQQGKLND 305
>U21320-1|AAA62535.2| 1151|Caenorhabditis elegans O-linked glcnac
transferase protein1, isoform a protein.
Length = 1151
Score = 30.3 bits (65), Expect = 0.19
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +1
Query: 64 ELLPEKIRQIKAMANEEVNIGNYTSAVDFYNIAIGEYPECAALYSNLSDAYMKRGWSGD 240
EL P +AN + G A Y A+ YPE AA +SNL+ ++G D
Sbjct: 425 ELCPTHADSQNNLANIKREQGKIEDATRLYLKALEIYPEFAAAHSNLASILQQQGKLND 483
Score = 26.2 bits (55), Expect = 3.1
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 127 NYTSAVDFYNIAIGEYPECAALYSNLSDAYMKRG 228
N ++ + +AI +CA YSNL + Y ++G
Sbjct: 174 NLEKSMQYSMLAIKVNNQCAEAYSNLGNYYKEKG 207
>Z81117-7|CAB03315.2| 329|Caenorhabditis elegans Hypothetical
protein T06E6.6 protein.
Length = 329
Score = 29.9 bits (64), Expect = 0.25
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = -3
Query: 186 RTFRVLPYSDVVEINRRCIVPYIHLLVCHRFNLPN 82
R F + Y+ +V C +PY+++++C N N
Sbjct: 229 RKFLLANYTQIVSFFITCFIPYLYIMICCYLNYHN 263
>U49956-2|AAO38616.1| 136|Caenorhabditis elegans Dauer or aging
adult overexpressionprotein 2 protein.
Length = 136
Score = 29.1 bits (62), Expect = 0.44
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 103 ANEEVNIGNYTSAVDFYNIAIGEYPECAALYSNLSDAYMKRGWSGD 240
A + NI N+ S +GE +CA+L N D K G SG+
Sbjct: 46 ALSQANILNFMSTCGERGPTVGEMWDCASLRHNHEDCCKKAGVSGE 91
>AC084153-4|AAK84598.2| 836|Caenorhabditis elegans Hypothetical
protein Y22D7AL.9 protein.
Length = 836
Score = 28.3 bits (60), Expect = 0.76
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +1
Query: 76 EKIRQIKAMANEEVNIGNYTSAVDFYNIAIGEYPECAALYSNLSDAYMK 222
E + ++ A + G Y A + Y A+ ++P+ L++NLS +K
Sbjct: 3 ENLEKVVHEAGSAYSDGRYQEARELYEKALRDHPKNGILHANLSAILLK 51
>Z29644-1|CAA82752.1| 540|Caenorhabditis elegans kinesin light
chain (isoform 1) protein.
Length = 540
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 130 YTSAVDFYNIAIG-EYPECAALYSNLSDAYMKRG 228
Y A++ Y +G + P A +NLS AY+K+G
Sbjct: 355 YKRALEIYESKLGPDDPNVAKTKNNLSSAYLKQG 388
>U55369-14|AAN84862.1| 540|Caenorhabditis elegans Kinesin light
chain protein 2,isoform b protein.
Length = 540
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 130 YTSAVDFYNIAIG-EYPECAALYSNLSDAYMKRG 228
Y A++ Y +G + P A +NLS AY+K+G
Sbjct: 355 YKRALEIYESKLGPDDPNVAKTKNNLSSAYLKQG 388
>U55369-13|AAN84863.1| 501|Caenorhabditis elegans Kinesin light
chain protein 2,isoform c protein.
Length = 501
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 130 YTSAVDFYNIAIG-EYPECAALYSNLSDAYMKRG 228
Y A++ Y +G + P A +NLS AY+K+G
Sbjct: 355 YKRALEIYESKLGPDDPNVAKTKNNLSSAYLKQG 388
>U55369-12|AAK52182.1| 522|Caenorhabditis elegans Kinesin light
chain protein 2,isoform a protein.
Length = 522
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 130 YTSAVDFYNIAIG-EYPECAALYSNLSDAYMKRG 228
Y A++ Y +G + P A +NLS AY+K+G
Sbjct: 376 YKRALEIYESKLGPDDPNVAKTKNNLSSAYLKQG 409
>U55369-11|AAT68902.1| 531|Caenorhabditis elegans Kinesin light
chain protein 2,isoform d protein.
Length = 531
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 130 YTSAVDFYNIAIG-EYPECAALYSNLSDAYMKRG 228
Y A++ Y +G + P A +NLS AY+K+G
Sbjct: 355 YKRALEIYESKLGPDDPNVAKTKNNLSSAYLKQG 388
>Z29645-1|CAA82753.1| 522|Caenorhabditis elegans kinesin light
chain (isoform 2) protein.
Length = 522
Score = 27.1 bits (57), Expect = 1.8
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 130 YTSAVDFYNIAIG-EYPECAALYSNLSDAYMKRG 228
Y A++ Y +G + P A +NLS AY+K+G
Sbjct: 376 YKRALEIYESKLGPDDPNVANTKNNLSSAYLKQG 409
>U80027-4|AAC48121.1| 344|Caenorhabditis elegans Serpentine
receptor, class j protein8 protein.
Length = 344
Score = 27.1 bits (57), Expect = 1.8
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 151 YNIAIGEYPECAALYSNLSDAYMKRGWSG 237
Y+ + P AALY N SDA R W G
Sbjct: 173 YHADTRDVPMLAALYWNASDAIRFRSWLG 201
>U29488-5|AAL27236.1| 417|Caenorhabditis elegans Hypothetical
protein C56C10.7b protein.
Length = 417
Score = 25.8 bits (54), Expect = 4.1
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 64 ELLPEKIRQIKAMANEEVNIGNYTSAVD-FYNIAIGE 171
ELL K+ +I + +++ IG Y A F NI +GE
Sbjct: 44 ELLAGKVSEISKESRQDLPIGEYLIAPQMFENIYLGE 80
>U29488-4|AAL27235.1| 401|Caenorhabditis elegans Hypothetical
protein C56C10.7a protein.
Length = 401
Score = 25.8 bits (54), Expect = 4.1
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 64 ELLPEKIRQIKAMANEEVNIGNYTSAVD-FYNIAIGE 171
ELL K+ +I + +++ IG Y A F NI +GE
Sbjct: 44 ELLAGKVSEISKESRQDLPIGEYLIAPQMFENIYLGE 80
>U39674-6|AAA80416.1| 291|Caenorhabditis elegans Hypothetical
protein C06E2.1 protein.
Length = 291
Score = 25.0 bits (52), Expect = 7.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -3
Query: 174 VLPYSDVVEINRRCIVPYIHL 112
VLP S VVE+ RR ++ Y +L
Sbjct: 152 VLPLSSVVELARRILMDYSNL 172
>AF003739-7|AAB58068.1| 339|Caenorhabditis elegans Hypothetical
protein M01D7.1 protein.
Length = 339
Score = 25.0 bits (52), Expect = 7.1
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 249 GVSVARPPTFHVRIR*IRVEGRTFRVLPYSDVVEINR 139
G + PP FH RI + VE ++ +L Y + E +R
Sbjct: 89 GAGIVEPPRFHQRI--LIVEAKSDVLLVYKSMEERSR 123
>Z83228-4|CAB05735.2| 318|Caenorhabditis elegans Hypothetical
protein F52F12.4 protein.
Length = 318
Score = 24.6 bits (51), Expect = 9.4
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 221 FMYASDKLE*RAAHSGYSP 165
F Y S+ E R H+GY+P
Sbjct: 74 FRYKSNMFEHRTVHTGYTP 92
>U64856-4|AAB04988.2| 506|Caenorhabditis elegans Bbs (bardet-biedl
syndrome) proteinprotein 8 protein.
Length = 506
Score = 24.6 bits (51), Expect = 9.4
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = +1
Query: 64 ELLPEKIRQIKAMANEEVNIGNYTSAVDFY 153
E+ PE + + MA + +G Y +V Y
Sbjct: 278 EVFPENVTMLTGMARVQEALGEYDESVKLY 307
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/44 (22%), Positives = 25/44 (56%)
Frame = +1
Query: 97 AMANEEVNIGNYTSAVDFYNIAIGEYPECAALYSNLSDAYMKRG 228
A++ + + N + A+D + + E ++++ L+DAY ++G
Sbjct: 505 ALSTIYLEMNNISDAIDELQQMVRLHKENKSVWARLADAYTRKG 548
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.312 0.129 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,997,741
Number of Sequences: 27780
Number of extensions: 79330
Number of successful extensions: 133
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 133
length of database: 12,740,198
effective HSP length: 63
effective length of database: 10,990,058
effective search space used: 219801160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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