Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_D14
         (251 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    25   0.15 
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    23   0.78 
AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength rhodo...    23   0.78 
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    22   1.0  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   1.4  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   1.4  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    20   4.2  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    20   5.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    20   5.5  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    20   5.5  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    20   5.5  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    20   5.5  
AB050744-1|BAB17753.1|  238|Apis mellifera period protein protein.     20   5.5  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    19   9.6  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 25.0 bits (52), Expect = 0.15
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = -3

Query: 249 GVSVARPPTFHVRIR*IRVEGRTFRVLPYSDVVEINRRCI 130
           G+++  PP +H R    RV   T      S  +  N+ C+
Sbjct: 607 GITIQEPPQWHTRSTEKRVSAGTPAAFNISTTIYENQNCL 646


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 0.78
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 204 IGCVHETWVVG 236
           I C +ETWV+G
Sbjct: 111 INCYYETWVLG 121


>AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 152

 Score = 22.6 bits (46), Expect = 0.78
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 204 IGCVHETWVVG 236
           I C +ETWV+G
Sbjct: 77  INCYYETWVLG 87


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 22.2 bits (45), Expect = 1.0
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = +2

Query: 176 RNVRPSTLIYRMRT*NVGGRATLTP 250
           RN  P+TL Y     N GG   LTP
Sbjct: 87  RNGIPATLTYISLDTNRGGSPKLTP 111


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 1.4
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +1

Query: 151 YNIAIGEYPECAALYSNLSDAYMKRGWSG 237
           YNIA+G+  +    Y+N+    +   ++G
Sbjct: 178 YNIAMGDTADMKKTYNNIDYYLLAANYTG 206


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 1.4
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +1

Query: 151 YNIAIGEYPECAALYSNLSDAYMKRGWSG 237
           YNIA+G+  +    Y+N+    +   ++G
Sbjct: 178 YNIAMGDTADMKKTYNNIDYYLLAANYTG 206


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 20.2 bits (40), Expect = 4.2
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 129 LYICG*FLQH 158
           L++CG FL+H
Sbjct: 672 LFVCGVFLKH 681


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 19.8 bits (39), Expect = 5.5
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 112 EVNIGNYTSAVDFYNIAIGEYPECA 186
           E+  G+Y S+VD Y   I  +  CA
Sbjct: 764 ELLSGHYDSSVDVYAFGILFWYLCA 788


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 19.8 bits (39), Expect = 5.5
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 112 EVNIGNYTSAVDFYNIAIGEYPECA 186
           E+  G+Y S+VD Y   I  +  CA
Sbjct: 802 ELLSGHYDSSVDVYAFGILFWYLCA 826


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 19.8 bits (39), Expect = 5.5
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +3

Query: 171 VPGMCGPLL*FIGCVHETWVVG 236
           V G C   L F  C+  +W  G
Sbjct: 450 VSGFCLLFLMFFECIAISWAFG 471


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 19.8 bits (39), Expect = 5.5
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +3

Query: 171 VPGMCGPLL*FIGCVHETWVVG 236
           V G C   L F  C+  +W  G
Sbjct: 503 VSGFCLLFLMFFECIAISWAFG 524


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 19.8 bits (39), Expect = 5.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 201 IRVEGRTFRVLPY 163
           I++EG +FR  PY
Sbjct: 363 IKLEGASFRSKPY 375


>AB050744-1|BAB17753.1|  238|Apis mellifera period protein protein.
          Length = 238

 Score = 19.8 bits (39), Expect = 5.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 201 IRVEGRTFRVLPY 163
           I++EG +FR  PY
Sbjct: 69  IKLEGASFRSKPY 81


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 19.0 bits (37), Expect = 9.6
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 85  RQIKAMANEEVNIGNYTSAVDFYNIA 162
           R  KA AN + N+G+        NIA
Sbjct: 373 RARKARANRKPNLGDIKPGSIIENIA 398


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.312    0.129    0.373 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,307
Number of Sequences: 438
Number of extensions: 921
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4527252
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.6 bits)