Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_D12
         (283 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   2.8  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         22   3.8  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    22   5.0  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    21   8.7  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 8   GIRHEGDACARRHSNNRVLVRLARAL 85
           G+  E +  +   SN + +VRLARAL
Sbjct: 210 GLSEENNVFSISTSNGKGVVRLARAL 235


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 75  HAHYQSSKILPRVLNTLLGNNLAIRRIL 158
           H+H++S+     +   +  NN A+ RIL
Sbjct: 529 HSHHRSNDTTDALCGLIFCNNRAMARIL 556


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 149 THLNLHTDSRPGK 187
           +HL LHTD +P K
Sbjct: 372 SHLLLHTDQKPYK 384


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -3

Query: 257  CVLFSCRCFERSVRTVRAQRLQTFS 183
            C+L SC   +   R    Q  +TF+
Sbjct: 1067 CILLSCWVLDADARPTFKQLAETFA 1091


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 303,308
Number of Sequences: 2352
Number of extensions: 5514
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 16515522
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)